RNA–Protein interactions for RNA: ENST00000554186.1

LINC00520-201, long intergenic non-protein coding RNA 520, humanhuman

TSL 5 BASIC

Gene LINC00520, Length 831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-201ENST00000554186 HLA-CQ95604 372 aa9.59□□□□□ -0.87
LINC00520-201ENST00000554186 AXIN1O15169 862 aa9.58□□□□□ -0.88
LINC00520-201ENST00000554186 SMPD1P17405 629 aa9.57□□□□□ -0.88
LINC00520-201ENST00000554186 GPIHBP1Q8IV16 184 aa9.57□□□□□ -0.88
LINC00520-201ENST00000554186 TTC24A2A3L6 582 aaPredicted RBP9.55□□□□□ -0.88
LINC00520-201ENST00000554186 CD46P15529 392 aa9.55□□□□□ -0.88
LINC00520-201ENST00000554186 SMCPP49901 116 aaPredicted RBP9.55□□□□□ -0.88
LINC00520-201ENST00000554186 PLCB2Q00722 1185 aa9.55□□□□□ -0.88
LINC00520-201ENST00000554186 TRIM32Q13049 653 aa9.55□□□□□ -0.88
LINC00520-201ENST00000554186 LCE2CQ5TA81 110 aa9.55□□□□□ -0.88
LINC00520-201ENST00000554186 C11orf95C9JLR9 678 aaPredicted RBP9.54□□□□□ -0.88
LINC00520-201ENST00000554186 J3QL48 77 aa9.54□□□□□ -0.88
LINC00520-201ENST00000554186 WNT7AO00755 349 aa9.54□□□□□ -0.88
LINC00520-201ENST00000554186 MMP16P51512 607 aa9.54□□□□□ -0.88
LINC00520-201ENST00000554186 MRGPRX2Q96LB1 330 aa9.54□□□□□ -0.88
LINC00520-201ENST00000554186 ZBTB24O43167 697 aaPredicted RBP9.53□□□□□ -0.88
LINC00520-201ENST00000554186 CTC1Q2NKJ3 1217 aa9.53□□□□□ -0.88
LINC00520-201ENST00000554186 NFX1Q12986 1120 aaKnown RBP9.52□□□□□ -0.89
LINC00520-201ENST00000554186 WFS1O76024 890 aa9.51□□□□□ -0.89
LINC00520-201ENST00000554186 DXOO77932 396 aaKnown RBP9.51□□□□□ -0.89
LINC00520-201ENST00000554186 SNRPBP14678 240 aaKnown RBP9.51□□□□□ -0.89
LINC00520-201ENST00000554186 SNIP1Q8TAD8 396 aaKnown RBP9.51□□□□□ -0.89
LINC00520-201ENST00000554186 SKOR1P84550 965 aa9.5□□□□□ -0.89
LINC00520-201ENST00000554186 GUCA2AQ02747 115 aa9.5□□□□□ -0.89
LINC00520-201ENST00000554186 HPS1Q92902 700 aa9.5□□□□□ -0.89
LINC00520-201ENST00000554186 USB1Q9BQ65 265 aaKnown RBP9.5□□□□□ -0.89
LINC00520-201ENST00000554186 ATP13A2Q9NQ11 1180 aa9.5□□□□□ -0.89
LINC00520-201ENST00000554186 KDM4AO75164 1064 aa9.49□□□□□ -0.89
LINC00520-201ENST00000554186 Q3C1V9 767 aa9.49□□□□□ -0.89
LINC00520-201ENST00000554186 GRIPAP1Q4V328 841 aa9.49□□□□□ -0.89
LINC00520-201ENST00000554186 KDM2AQ9Y2K7 1162 aa9.49□□□□□ -0.89
LINC00520-201ENST00000554186 MDM2Q00987 491 aaPredicted RBP9.48□□□□□ -0.89
LINC00520-201ENST00000554186 MAP2K5Q13163 448 aa9.48□□□□□ -0.89
LINC00520-201ENST00000554186 SYMPKQ92797 1274 aaKnown RBP9.47□□□□□ -0.89
LINC00520-201ENST00000554186 CCDC24Q8N4L8 307 aa9.46□□□□□ -0.9
LINC00520-201ENST00000554186 IRF6O14896 467 aa9.45□□□□□ -0.9
LINC00520-201ENST00000554186 HOXA2O43364 376 aa9.45□□□□□ -0.9
LINC00520-201ENST00000554186 RC3H1Q5TC82 1133 aaKnown RBP9.44□□□□□ -0.9
LINC00520-201ENST00000554186 TRIM47Q96LD4 638 aa9.43□□□□□ -0.9
LINC00520-201ENST00000554186 PTCRAQ6ISU1 281 aaPredicted RBP9.42□□□□□ -0.9
LINC00520-201ENST00000554186 INSM1Q01101 510 aaPredicted RBP9.41□□□□□ -0.9
LINC00520-201ENST00000554186 CCDC102AQ96A19 550 aa9.41□□□□□ -0.9
LINC00520-201ENST00000554186 WIPF1O43516 503 aa9.4□□□□□ -0.9
LINC00520-201ENST00000554186 JUNDP17535 347 aa9.4□□□□□ -0.9
LINC00520-201ENST00000554186 HAP1P54257 671 aaPredicted RBP9.4□□□□□ -0.9
LINC00520-201ENST00000554186 USP46P62068 366 aa9.4□□□□□ -0.9
LINC00520-201ENST00000554186 TERTO14746 1132 aaKnown RBP9.39□□□□□ -0.91
LINC00520-201ENST00000554186 REPIN1Q9BWE0 567 aaKnown RBP9.39□□□□□ -0.91
LINC00520-201ENST00000554186 ALDH1A1P00352 501 aa9.38□□□□□ -0.91
LINC00520-201ENST00000554186 WNT7BP56706 349 aa9.38□□□□□ -0.91
LINC00520-201ENST00000554186 FAM217BQ9NTX9 383 aaPredicted RBP9.38□□□□□ -0.91
LINC00520-201ENST00000554186 MINK1Q8N4C8 1332 aaPredicted RBP9.37□□□□□ -0.91
LINC00520-201ENST00000554186 PCDHGC3Q9UN70 934 aa9.37□□□□□ -0.91
LINC00520-201ENST00000554186 SIAH2O43255 324 aa9.36□□□□□ -0.91
LINC00520-201ENST00000554186 BMP1P13497 986 aa9.36□□□□□ -0.91
LINC00520-201ENST00000554186 SENP2Q9HC62 589 aa9.36□□□□□ -0.91
LINC00520-201ENST00000554186 GPCPD1Q9NPB8 672 aa9.35□□□□□ -0.91
LINC00520-201ENST00000554186 TRIM46Q7Z4K8 759 aa9.34□□□□□ -0.91
LINC00520-201ENST00000554186 NUDT12Q9BQG2 462 aa9.34□□□□□ -0.91
LINC00520-201ENST00000554186 RETREG3Q86VR2 466 aa9.33□□□□□ -0.92
LINC00520-201ENST00000554186 SH3BP2P78314 561 aa9.32□□□□□ -0.92
LINC00520-201ENST00000554186 CLCN1P35523 988 aa9.31□□□□□ -0.92
LINC00520-201ENST00000554186 EHBP1Q8NDI1 1231 aa9.31□□□□□ -0.92
LINC00520-201ENST00000554186 KIFC2Q96AC6 838 aa9.31□□□□□ -0.92
LINC00520-201ENST00000554186 FDX1P10109 184 aa9.3□□□□□ -0.92
LINC00520-201ENST00000554186 NUTM1Q86Y26 1132 aa9.3□□□□□ -0.92
LINC00520-201ENST00000554186 C6orf229H3BNL8 230 aa9.29□□□□□ -0.92
LINC00520-201ENST00000554186 NDUFV2P19404 249 aa9.29□□□□□ -0.92
LINC00520-201ENST00000554186 VEGFBP49765 207 aa9.29□□□□□ -0.92
LINC00520-201ENST00000554186 TLL2Q9Y6L7 1015 aa9.29□□□□□ -0.92
LINC00520-201ENST00000554186 LINC01559Q495D7 138 aa9.28□□□□□ -0.92
LINC00520-201ENST00000554186 CAPN5O15484 640 aaPredicted RBP9.27□□□□□ -0.93
LINC00520-201ENST00000554186 CCNYL3P0C7X3 344 aa9.27□□□□□ -0.93
LINC00520-201ENST00000554186 MS4A1P11836 297 aa9.27□□□□□ -0.93
LINC00520-201ENST00000554186 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
LINC00520-201ENST00000554186 SPIRE2Q8WWL2 714 aa9.27□□□□□ -0.93
LINC00520-201ENST00000554186 GMPRP36959 345 aa9.26□□□□□ -0.93
LINC00520-201ENST00000554186 UNC93B1Q9H1C4 597 aa9.26□□□□□ -0.93
LINC00520-201ENST00000554186 WASF2Q9Y6W5 498 aa9.26□□□□□ -0.93
LINC00520-201ENST00000554186 MOXD2PA6NHM9 499 aa9.25□□□□□ -0.93
LINC00520-201ENST00000554186 BAP1Q92560 729 aa9.25□□□□□ -0.93
LINC00520-201ENST00000554186 NXF1Q9UBU9 619 aaKnown RBP9.25□□□□□ -0.93
LINC00520-201ENST00000554186 SSTR3P32745 418 aaPredicted RBP9.24□□□□□ -0.93
LINC00520-201ENST00000554186 PTPRNQ16849 979 aa9.23□□□□□ -0.93
LINC00520-201ENST00000554186 EVA1BQ9NVM1 165 aa9.23□□□□□ -0.93
LINC00520-201ENST00000554186 ERBB4Q15303 1308 aa9.23□□□□□ -0.93
LINC00520-201ENST00000554186 TULP1O00294 542 aaPredicted RBP9.22□□□□□ -0.93
LINC00520-201ENST00000554186 KRI1Q8N9T8 703 aaKnown RBP9.22□□□□□ -0.93
LINC00520-201ENST00000554186 PRR7Q8TB68 274 aa9.22□□□□□ -0.93
LINC00520-201ENST00000554186 ZFP42Q96MM3 310 aa9.22□□□□□ -0.93
LINC00520-201ENST00000554186 KCNH2Q12809 1159 aa9.21□□□□□ -0.94
LINC00520-201ENST00000554186 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.21□□□□□ -0.94
LINC00520-201ENST00000554186 H3BM21 787 aa9.2□□□□□ -0.94
LINC00520-201ENST00000554186 ZNF511Q8NB15 262 aa9.2□□□□□ -0.94
LINC00520-201ENST00000554186 KRTAP4-8Q9BYQ9 185 aa9.2□□□□□ -0.94
LINC00520-201ENST00000554186 NNTQ13423 1086 aa9.19□□□□□ -0.94
LINC00520-201ENST00000554186 SLC16A10Q8TF71 515 aa9.19□□□□□ -0.94
LINC00520-201ENST00000554186 SOBPA7XYQ1 873 aa9.18□□□□□ -0.94
LINC00520-201ENST00000554186 TIMP2P16035 220 aa9.17□□□□□ -0.94
LINC00520-201ENST00000554186 MTMR2Q13614 643 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms