RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 ADGRB2O60241 1585 aa10.59□□□□□ -0.71
TDP1-209ENST00000554180 PLEKHH1Q9ULM0 1364 aa10.58□□□□□ -0.72
TDP1-209ENST00000554180 NINLQ9Y2I6 1382 aa10.58□□□□□ -0.72
TDP1-209ENST00000554180 HSPA2P54652 639 aa10.58□□□□□ -0.72
TDP1-209ENST00000554180 NKTRP30414 1462 aaKnown RBP10.57□□□□□ -0.72
TDP1-209ENST00000554180 ATAD2Q6PL18 1390 aa10.57□□□□□ -0.72
TDP1-209ENST00000554180 KCNA6P17658 529 aa10.57□□□□□ -0.72
TDP1-209ENST00000554180 CHD2O14647 1828 aaKnown RBP10.56□□□□□ -0.72
TDP1-209ENST00000554180 SAFB2Q14151 953 aaKnown RBP eCLIP10.56□□□□□ -0.72
TDP1-209ENST00000554180 WAPLQ7Z5K2 1190 aa10.56□□□□□ -0.72
TDP1-209ENST00000554180 MINK1Q8N4C8 1332 aaPredicted RBP10.56□□□□□ -0.72
TDP1-209ENST00000554180 POLR3GLQ9BT43 218 aa10.55□□□□□ -0.72
TDP1-209ENST00000554180 MYOM1P52179 1685 aa10.54□□□□□ -0.72
TDP1-209ENST00000554180 WASLO00401 505 aaPredicted RBP10.54□□□□□ -0.72
TDP1-209ENST00000554180 DMRT2Q9Y5R5 561 aa10.54□□□□□ -0.72
TDP1-209ENST00000554180 STRCQ7RTU9 1775 aa10.54□□□□□ -0.72
TDP1-209ENST00000554180 SRPK2P78362 688 aaKnown RBP10.53□□□□□ -0.72
TDP1-209ENST00000554180 PHF23Q9BUL5 403 aaPredicted RBP10.53□□□□□ -0.72
TDP1-209ENST00000554180 ADGRL3Q9HAR2 1447 aa10.52□□□□□ -0.73
TDP1-209ENST00000554180 NCOA3Q9Y6Q9 1424 aa10.52□□□□□ -0.73
TDP1-209ENST00000554180 CDK19Q9BWU1 502 aa10.52□□□□□ -0.73
TDP1-209ENST00000554180 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.52□□□□□ -0.73
TDP1-209ENST00000554180 CDC42BPGQ6DT37 1551 aa10.52□□□□□ -0.73
TDP1-209ENST00000554180 ATP7BP35670 1465 aa10.51□□□□□ -0.73
TDP1-209ENST00000554180 ANP32CO43423 234 aa10.51□□□□□ -0.73
TDP1-209ENST00000554180 CABP2Q9NPB3 220 aa10.51□□□□□ -0.73
TDP1-209ENST00000554180 KTN1Q86UP2 1357 aaKnown RBP10.51□□□□□ -0.73
TDP1-209ENST00000554180 ANKRD36BQ8N2N9 1353 aa10.51□□□□□ -0.73
TDP1-209ENST00000554180 ANKARQ7Z5J8 1434 aa10.5□□□□□ -0.73
TDP1-209ENST00000554180 PER1O15534 1290 aaPredicted RBP10.5□□□□□ -0.73
TDP1-209ENST00000554180 PANK3Q9H999 370 aa10.5□□□□□ -0.73
TDP1-209ENST00000554180 NPC1L1Q9UHC9 1359 aa10.5□□□□□ -0.73
TDP1-209ENST00000554180 DCCP43146 1447 aa10.49□□□□□ -0.73
TDP1-209ENST00000554180 TMC1Q8TDI8 760 aa10.48□□□□□ -0.73
TDP1-209ENST00000554180 TERF2IPQ9NYB0 399 aa10.48□□□□□ -0.73
TDP1-209ENST00000554180 KNSTRNQ9Y448 316 aa10.48□□□□□ -0.73
TDP1-209ENST00000554180 CCDC61Q9Y6R9 512 aa10.48□□□□□ -0.73
TDP1-209ENST00000554180 NALCNQ8IZF0 1738 aa10.47□□□□□ -0.73
TDP1-209ENST00000554180 PROSER2Q86WR7 435 aaPredicted RBP10.47□□□□□ -0.73
TDP1-209ENST00000554180 MIER1Q8N108 512 aa10.47□□□□□ -0.73
TDP1-209ENST00000554180 NUDT16Q96DE0 195 aaKnown RBP10.47□□□□□ -0.73
TDP1-209ENST00000554180 SLC12A5Q9H2X9 1139 aa10.47□□□□□ -0.73
TDP1-209ENST00000554180 PRKRIP1Q9H875 184 aaPredicted RBP10.47□□□□□ -0.73
TDP1-209ENST00000554180 PPIP5K1Q6PFW1 1433 aa10.47□□□□□ -0.73
TDP1-209ENST00000554180 CD163L1Q9NR16 1453 aa10.47□□□□□ -0.73
TDP1-209ENST00000554180 USP32Q8NFA0 1604 aa10.47□□□□□ -0.73
TDP1-209ENST00000554180 TOPAZ1Q8N9V7 1692 aa10.47□□□□□ -0.73
TDP1-209ENST00000554180 PRR36Q9H6K5 1346 aa10.46□□□□□ -0.73
TDP1-209ENST00000554180 A0A1W2PP64 1363 aa10.46□□□□□ -0.74
TDP1-209ENST00000554180 TMEM94Q12767 1356 aa10.46□□□□□ -0.74
TDP1-209ENST00000554180 CPSF1Q10570 1443 aaKnown RBP10.46□□□□□ -0.74
TDP1-209ENST00000554180 FMN2Q9NZ56 1722 aa10.46□□□□□ -0.74
TDP1-209ENST00000554180 NSD3Q9BZ95 1437 aa10.45□□□□□ -0.74
TDP1-209ENST00000554180 NSD2O96028 1365 aa10.45□□□□□ -0.74
TDP1-209ENST00000554180 PARD3Q8TEW0 1356 aa10.45□□□□□ -0.74
TDP1-209ENST00000554180 PLEKHG3A1L390 1219 aa10.45□□□□□ -0.74
TDP1-209ENST00000554180 CCER2I3L3R5 266 aa10.45□□□□□ -0.74
TDP1-209ENST00000554180 RALBP1Q15311 655 aa10.45□□□□□ -0.74
TDP1-209ENST00000554180 AMER1Q5JTC6 1135 aaPredicted RBP10.45□□□□□ -0.74
TDP1-209ENST00000554180 HDGFL2Q7Z4V5 671 aaPredicted RBP10.45□□□□□ -0.74
TDP1-209ENST00000554180 C19orf44Q9H6X5 657 aa10.45□□□□□ -0.74
TDP1-209ENST00000554180 CABP1Q9NZU7 370 aa10.45□□□□□ -0.74
TDP1-209ENST00000554180 STRCP1A6NGW2 1772 aa10.44□□□□□ -0.74
TDP1-209ENST00000554180 ITSN1Q15811 1721 aa10.44□□□□□ -0.74
TDP1-209ENST00000554180 CGNL1Q0VF96 1302 aa10.44□□□□□ -0.74
TDP1-209ENST00000554180 C14orf37Q86TY3 774 aa10.44□□□□□ -0.74
TDP1-209ENST00000554180 CARD14Q9BXL6 1004 aa10.44□□□□□ -0.74
TDP1-209ENST00000554180 LRRC7Q96NW7 1537 aa10.43□□□□□ -0.74
TDP1-209ENST00000554180 EDC4Q6P2E9 1401 aaKnown RBP10.43□□□□□ -0.74
TDP1-209ENST00000554180 POLR3AO14802 1390 aaPredicted RBP10.43□□□□□ -0.74
TDP1-209ENST00000554180 ZNF335Q9H4Z2 1342 aaPredicted RBP10.43□□□□□ -0.74
TDP1-209ENST00000554180 ZNF692Q9BU19 519 aaPredicted RBP10.43□□□□□ -0.74
TDP1-209ENST00000554180 MSH6P52701 1360 aa10.42□□□□□ -0.74
TDP1-209ENST00000554180 BRD4O60885 1362 aaPredicted RBP10.41□□□□□ -0.74
TDP1-209ENST00000554180 MYBBP1AQ9BQG0 1328 aaKnown RBP10.41□□□□□ -0.74
TDP1-209ENST00000554180 CADPS2Q86UW7 1296 aa10.41□□□□□ -0.74
TDP1-209ENST00000554180 ATF3P18847 181 aa10.4□□□□□ -0.74
TDP1-209ENST00000554180 MON2Q7Z3U7 1717 aa10.4□□□□□ -0.74
TDP1-209ENST00000554180 USP6P35125 1406 aa10.4□□□□□ -0.75
TDP1-209ENST00000554180 MST1RQ04912 1400 aa10.4□□□□□ -0.75
TDP1-209ENST00000554180 ACEP12821 1306 aa10.39□□□□□ -0.75
TDP1-209ENST00000554180 C1orf167Q5SNV9 1468 aa10.39□□□□□ -0.75
TDP1-209ENST00000554180 CC2D1BQ5T0F9 858 aaKnown RBP10.39□□□□□ -0.75
TDP1-209ENST00000554180 RBM33Q96EV2 1170 aaKnown RBP10.39□□□□□ -0.75
TDP1-209ENST00000554180 AKAP12Q02952 1782 aa10.39□□□□□ -0.75
TDP1-209ENST00000554180 NRKQ7Z2Y5 1582 aa10.39□□□□□ -0.75
TDP1-209ENST00000554180 NUTM2FA1L443 756 aa10.38□□□□□ -0.75
TDP1-209ENST00000554180 NLRP13Q86W25 1043 aa10.38□□□□□ -0.75
TDP1-209ENST00000554180 PHF8Q9UPP1 1060 aa10.38□□□□□ -0.75
TDP1-209ENST00000554180 SSH2Q76I76 1423 aa10.38□□□□□ -0.75
TDP1-209ENST00000554180 KIF1AQ12756 1690 aa10.38□□□□□ -0.75
TDP1-209ENST00000554180 TTC21AQ8NDW8 1320 aa10.37□□□□□ -0.75
TDP1-209ENST00000554180 LTBP4Q8N2S1 1624 aa10.37□□□□□ -0.75
TDP1-209ENST00000554180 NGDNQ8NEJ9 315 aaKnown RBP10.37□□□□□ -0.75
TDP1-209ENST00000554180 XIRP1Q702N8 1843 aaKnown RBP10.37□□□□□ -0.75
TDP1-209ENST00000554180 FYB1O15117 783 aa10.36□□□□□ -0.75
TDP1-209ENST00000554180 ESCO1Q5FWF5 840 aa10.36□□□□□ -0.75
TDP1-209ENST00000554180 TTC21BQ7Z4L5 1316 aa10.35□□□□□ -0.75
TDP1-209ENST00000554180 SCAF1Q9H7N4 1312 aaKnown RBP10.35□□□□□ -0.75
TDP1-209ENST00000554180 MORC1Q86VD1 984 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms