RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 BRINP3Q76B58 766 aa3.47□□□□□ -1.85
PRPF39-205ENST00000554081 NPM2Q86SE8 214 aaKnown RBP3.47□□□□□ -1.85
PRPF39-205ENST00000554081 CABP1Q9NZU7 370 aa3.47□□□□□ -1.85
PRPF39-205ENST00000554081 ATP7AQ04656 1500 aa3.47□□□□□ -1.85
PRPF39-205ENST00000554081 ARAP3Q8WWN8 1544 aa3.47□□□□□ -1.85
PRPF39-205ENST00000554081 RIMS2Q9UQ26 1411 aa3.47□□□□□ -1.85
PRPF39-205ENST00000554081 CAMSAP1Q5T5Y3 1602 aa3.47□□□□□ -1.85
PRPF39-205ENST00000554081 TMEM2Q9UHN6 1383 aa3.47□□□□□ -1.85
PRPF39-205ENST00000554081 GALR2O43603 387 aaPredicted RBP3.47□□□□□ -1.85
PRPF39-205ENST00000554081 ZNF428Q96B54 188 aa3.47□□□□□ -1.85
PRPF39-205ENST00000554081 GOLGB1Q14789 3259 aaKnown RBP3.47□□□□□ -1.85
PRPF39-205ENST00000554081 SETD1BQ9UPS6 1966 aaKnown RBP3.47□□□□□ -1.85
PRPF39-205ENST00000554081 RAB3GAP2Q9H2M9 1393 aa3.46□□□□□ -1.85
PRPF39-205ENST00000554081 TRIM37O94972 964 aa3.46□□□□□ -1.86
PRPF39-205ENST00000554081 KCNQ4P56696 695 aa3.46□□□□□ -1.86
PRPF39-205ENST00000554081 CDK19Q9BWU1 502 aa3.46□□□□□ -1.86
PRPF39-205ENST00000554081 NCOA1Q15788 1441 aa3.46□□□□□ -1.86
PRPF39-205ENST00000554081 UGGT1Q9NYU2 1555 aa3.46□□□□□ -1.86
PRPF39-205ENST00000554081 GPRASP1Q5JY77 1395 aa3.46□□□□□ -1.86
PRPF39-205ENST00000554081 TBX22Q9Y458 520 aa3.46□□□□□ -1.86
PRPF39-205ENST00000554081 APBA3O96018 575 aa3.46□□□□□ -1.86
PRPF39-205ENST00000554081 ZNF772Q68DY9 489 aaPredicted RBP3.46□□□□□ -1.86
PRPF39-205ENST00000554081 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.46□□□□□ -1.86
PRPF39-205ENST00000554081 NPHP3Q7Z494 1330 aa3.45□□□□□ -1.86
PRPF39-205ENST00000554081 MAGI2Q86UL8 1455 aa3.45□□□□□ -1.86
PRPF39-205ENST00000554081 EIF5BO60841 1220 aaKnown RBP3.45□□□□□ -1.86
PRPF39-205ENST00000554081 EN1Q05925 392 aaPredicted RBP3.45□□□□□ -1.86
PRPF39-205ENST00000554081 NEUROD2Q15784 382 aa3.45□□□□□ -1.86
PRPF39-205ENST00000554081 NUDT16Q96DE0 195 aaKnown RBP3.45□□□□□ -1.86
PRPF39-205ENST00000554081 TMEM121BQ9BXQ6 578 aaPredicted RBP3.45□□□□□ -1.86
PRPF39-205ENST00000554081 GGNBP2Q9H3C7 697 aa3.45□□□□□ -1.86
PRPF39-205ENST00000554081 ZRANB1Q9UGI0 708 aa3.45□□□□□ -1.86
PRPF39-205ENST00000554081 UTRNP46939 3433 aa3.45□□□□□ -1.86
PRPF39-205ENST00000554081 EHBP1L1Q8N3D4 1523 aa3.45□□□□□ -1.86
PRPF39-205ENST00000554081 DHX57Q6P158 1386 aaKnown RBP3.45□□□□□ -1.86
PRPF39-205ENST00000554081 NOS1P29475 1434 aa3.45□□□□□ -1.86
PRPF39-205ENST00000554081 NPATQ14207 1427 aa3.45□□□□□ -1.86
PRPF39-205ENST00000554081 KIAA1107Q9UPP5 1409 aa3.45□□□□□ -1.86
PRPF39-205ENST00000554081 U2SURPO15042 1029 aaKnown RBP3.45□□□□□ -1.86
PRPF39-205ENST00000554081 R3HDM1Q15032 1099 aaKnown RBP3.45□□□□□ -1.86
PRPF39-205ENST00000554081 CC2D1BQ5T0F9 858 aaKnown RBP3.45□□□□□ -1.86
PRPF39-205ENST00000554081 USHBP1Q8N6Y0 703 aa3.45□□□□□ -1.86
PRPF39-205ENST00000554081 ZNF526Q8TF50 670 aaPredicted RBP3.45□□□□□ -1.86
PRPF39-205ENST00000554081 SLC12A5Q9H2X9 1139 aa3.45□□□□□ -1.86
PRPF39-205ENST00000554081 PTPRKQ15262 1439 aa3.45□□□□□ -1.86
PRPF39-205ENST00000554081 MLH3Q9UHC1 1453 aa3.44□□□□□ -1.86
PRPF39-205ENST00000554081 HDGFL2Q7Z4V5 671 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-205ENST00000554081 SEPT12Q8IYM1 358 aa3.44□□□□□ -1.86
PRPF39-205ENST00000554081 ATF5Q9Y2D1 282 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-205ENST00000554081 CFAP43Q8NDM7 1665 aa3.44□□□□□ -1.86
PRPF39-205ENST00000554081 METP08581 1390 aa3.44□□□□□ -1.86
PRPF39-205ENST00000554081 TIAM1Q13009 1591 aa3.44□□□□□ -1.86
PRPF39-205ENST00000554081 SAMD9Q5K651 1589 aa3.44□□□□□ -1.86
PRPF39-205ENST00000554081 ST20-MTHFSA0A0A6YYL1 179 aa3.44□□□□□ -1.86
PRPF39-205ENST00000554081 TRPC5Q9UL62 973 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-205ENST00000554081 GTF3C3Q9Y5Q9 886 aa3.44□□□□□ -1.86
PRPF39-205ENST00000554081 ROCK2O75116 1388 aaKnown RBP3.44□□□□□ -1.86
PRPF39-205ENST00000554081 SAMD9LQ8IVG5 1584 aa3.44□□□□□ -1.86
PRPF39-205ENST00000554081 MYO5CQ9NQX4 1742 aa3.44□□□□□ -1.86
PRPF39-205ENST00000554081 RRS1Q15050 365 aaKnown RBP3.44□□□□□ -1.86
PRPF39-205ENST00000554081 TPRNQ4KMQ1 711 aa3.44□□□□□ -1.86
PRPF39-205ENST00000554081 SETD5Q9C0A6 1442 aa3.43□□□□□ -1.86
PRPF39-205ENST00000554081 MBD5Q9P267 1494 aa3.43□□□□□ -1.86
PRPF39-205ENST00000554081 ABCC1P33527 1531 aa3.43□□□□□ -1.86
PRPF39-205ENST00000554081 GLI2P10070 1586 aa3.43□□□□□ -1.86
PRPF39-205ENST00000554081 ABCA9Q8IUA7 1624 aa3.43□□□□□ -1.86
PRPF39-205ENST00000554081 PHF14O94880 888 aa3.43□□□□□ -1.86
PRPF39-205ENST00000554081 RBM6P78332 1123 aaKnown RBP3.43□□□□□ -1.86
PRPF39-205ENST00000554081 NLRP13Q86W25 1043 aa3.43□□□□□ -1.86
PRPF39-205ENST00000554081 NGEFQ8N5V2 710 aa3.43□□□□□ -1.86
PRPF39-205ENST00000554081 SCAF11Q99590 1463 aaKnown RBP3.43□□□□□ -1.86
PRPF39-205ENST00000554081 SHANK2Q9UPX8 1470 aa3.43□□□□□ -1.86
PRPF39-205ENST00000554081 FAM177BA6PVY3 158 aa3.43□□□□□ -1.86
PRPF39-205ENST00000554081 ATMINO43313 823 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-205ENST00000554081 ZBTB7AO95365 584 aa3.43□□□□□ -1.86
PRPF39-205ENST00000554081 BAG6P46379 1132 aa3.43□□□□□ -1.86
PRPF39-205ENST00000554081 PLEKHH1Q9ULM0 1364 aa3.43□□□□□ -1.86
PRPF39-205ENST00000554081 MAP3K4Q9Y6R4 1608 aa3.43□□□□□ -1.86
PRPF39-205ENST00000554081 CCDC61Q9Y6R9 512 aa3.43□□□□□ -1.86
PRPF39-205ENST00000554081 ACEP12821 1306 aa3.42□□□□□ -1.86
PRPF39-205ENST00000554081 CENPJQ9HC77 1338 aaPredicted RBP3.42□□□□□ -1.86
PRPF39-205ENST00000554081 PLCB2Q00722 1185 aa3.42□□□□□ -1.86
PRPF39-205ENST00000554081 MPRIPQ6WCQ1 1025 aa3.42□□□□□ -1.86
PRPF39-205ENST00000554081 KRT27Q7Z3Y8 459 aa3.42□□□□□ -1.86
PRPF39-205ENST00000554081 LAS1LQ9Y4W2 734 aaKnown RBP3.42□□□□□ -1.86
PRPF39-205ENST00000554081 RTEL1-TNFRSF6BF6WH68 1400 aa3.42□□□□□ -1.86
PRPF39-205ENST00000554081 JCADQ9P266 1359 aa3.42□□□□□ -1.86
PRPF39-205ENST00000554081 WASLO00401 505 aaPredicted RBP3.42□□□□□ -1.86
PRPF39-205ENST00000554081 EXOC5O00471 708 aa3.42□□□□□ -1.86
PRPF39-205ENST00000554081 TCERG1O14776 1098 aaKnown RBP3.42□□□□□ -1.86
PRPF39-205ENST00000554081 PTCD1O75127 700 aaKnown RBP3.42□□□□□ -1.86
PRPF39-205ENST00000554081 NEFMP07197 916 aa3.42□□□□□ -1.86
PRPF39-205ENST00000554081 DDB1Q16531 1140 aa3.42□□□□□ -1.86
PRPF39-205ENST00000554081 NBPF8Q3BBV2 869 aa3.42□□□□□ -1.86
PRPF39-205ENST00000554081 MSL1Q68DK7 614 aa3.42□□□□□ -1.86
PRPF39-205ENST00000554081 LARP1Q6PKG0 1096 aaKnown RBP3.42□□□□□ -1.86
PRPF39-205ENST00000554081 NME9Q86XW9 330 aa3.42□□□□□ -1.86
PRPF39-205ENST00000554081 COG3Q96JB2 828 aa3.42□□□□□ -1.86
PRPF39-205ENST00000554081 ARHGEF40Q8TER5 1519 aa3.41□□□□□ -1.86
PRPF39-205ENST00000554081 CLTCQ00610 1675 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms