RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 BCL2L12Q9HB09 334 aa11.42□□□□□ -0.58
ATXN3-224ENST00000554040 ABCA6Q8N139 1617 aa11.41□□□□□ -0.58
ATXN3-224ENST00000554040 CLIP1P30622 1438 aa11.41□□□□□ -0.58
ATXN3-224ENST00000554040 FMN1Q68DA7 1419 aa11.41□□□□□ -0.58
ATXN3-224ENST00000554040 MYO5CQ9NQX4 1742 aa11.4□□□□□ -0.58
ATXN3-224ENST00000554040 EEA1Q15075 1411 aa11.4□□□□□ -0.58
ATXN3-224ENST00000554040 PTPRKQ15262 1439 aa11.39□□□□□ -0.59
ATXN3-224ENST00000554040 RTN4Q9NQC3 1192 aaKnown RBP11.39□□□□□ -0.59
ATXN3-224ENST00000554040 KIF14Q15058 1648 aa11.38□□□□□ -0.59
ATXN3-224ENST00000554040 CAMK2BQ13554 666 aa11.38□□□□□ -0.59
ATXN3-224ENST00000554040 GGT6Q6P531 493 aa11.38□□□□□ -0.59
ATXN3-224ENST00000554040 VPS9D1Q9Y2B5 631 aa11.38□□□□□ -0.59
ATXN3-224ENST00000554040 SPAG9O60271 1321 aaKnown RBP11.37□□□□□ -0.59
ATXN3-224ENST00000554040 MAP3K9P80192 1104 aa11.37□□□□□ -0.59
ATXN3-224ENST00000554040 ADAM33Q9BZ11 813 aa11.37□□□□□ -0.59
ATXN3-224ENST00000554040 AMER1Q5JTC6 1135 aaPredicted RBP11.36□□□□□ -0.59
ATXN3-224ENST00000554040 SHANK2Q9UPX8 1470 aa11.36□□□□□ -0.59
ATXN3-224ENST00000554040 CPS1P31327 1500 aa11.35□□□□□ -0.59
ATXN3-224ENST00000554040 UBTFP17480 764 aaKnown RBP11.35□□□□□ -0.59
ATXN3-224ENST00000554040 HNRNPMP52272 730 aaKnown RBP eCLIP11.35□□□□□ -0.59
ATXN3-224ENST00000554040 RGS17Q9UGC6 210 aaPredicted RBP11.35□□□□□ -0.59
ATXN3-224ENST00000554040 ZNF777Q9ULD5 760 aaPredicted RBP11.35□□□□□ -0.59
ATXN3-224ENST00000554040 ABCC1P33527 1531 aa11.35□□□□□ -0.59
ATXN3-224ENST00000554040 KIDINS220Q9ULH0 1771 aa11.34□□□□□ -0.59
ATXN3-224ENST00000554040 MROH2AA6NES4 1674 aa11.34□□□□□ -0.59
ATXN3-224ENST00000554040 CEP170BQ9Y4F5 1589 aaPredicted RBP11.34□□□□□ -0.59
ATXN3-224ENST00000554040 ANKLE2Q86XL3 938 aa11.34□□□□□ -0.59
ATXN3-224ENST00000554040 ZDHHC16Q969W1 377 aa11.34□□□□□ -0.59
ATXN3-224ENST00000554040 SLC4A5Q9BY07 1137 aa11.34□□□□□ -0.59
ATXN3-224ENST00000554040 PCDHGA10Q9Y5H3 936 aa11.33□□□□□ -0.6
ATXN3-224ENST00000554040 A2ML1A8K2U0 1454 aa11.32□□□□□ -0.6
ATXN3-224ENST00000554040 ARHGAP35Q9NRY4 1499 aa11.32□□□□□ -0.6
ATXN3-224ENST00000554040 PTPREP23469 700 aa11.32□□□□□ -0.6
ATXN3-224ENST00000554040 ZBED2Q9BTP6 218 aa11.32□□□□□ -0.6
ATXN3-224ENST00000554040 CDC42BPBQ9Y5S2 1711 aa11.32□□□□□ -0.6
ATXN3-224ENST00000554040 BHMG1C9JSJ3 638 aaPredicted RBP11.31□□□□□ -0.6
ATXN3-224ENST00000554040 THEMISQ8N1K5 641 aaPredicted RBP11.31□□□□□ -0.6
ATXN3-224ENST00000554040 SAMD9LQ8IVG5 1584 aa11.31□□□□□ -0.6
ATXN3-224ENST00000554040 A2MP01023 1474 aa11.31□□□□□ -0.6
ATXN3-224ENST00000554040 ZNF142P52746 1687 aaPredicted RBP11.3□□□□□ -0.6
ATXN3-224ENST00000554040 FBXO31Q5XUX0 539 aaPredicted RBP11.3□□□□□ -0.6
ATXN3-224ENST00000554040 HCSTQ9UBK5 93 aa11.3□□□□□ -0.6
ATXN3-224ENST00000554040 MYO3AQ8NEV4 1616 aa11.3□□□□□ -0.6
ATXN3-224ENST00000554040 KIAA1107Q9UPP5 1409 aa11.28□□□□□ -0.6
ATXN3-224ENST00000554040 ITSN2Q9NZM3 1697 aa11.28□□□□□ -0.6
ATXN3-224ENST00000554040 DPYSL4O14531 572 aa11.28□□□□□ -0.6
ATXN3-224ENST00000554040 TNRQ92752 1358 aa11.28□□□□□ -0.6
ATXN3-224ENST00000554040 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.28□□□□□ -0.6
ATXN3-224ENST00000554040 DNMT1P26358 1616 aaKnown RBP11.27□□□□□ -0.6
ATXN3-224ENST00000554040 PREX2Q70Z35 1606 aa11.27□□□□□ -0.6
ATXN3-224ENST00000554040 ALKQ9UM73 1620 aa11.27□□□□□ -0.6
ATXN3-224ENST00000554040 SPRYD3Q8NCJ5 442 aa11.27□□□□□ -0.61
ATXN3-224ENST00000554040 KCTD12Q96CX2 325 aaKnown RBP11.27□□□□□ -0.61
ATXN3-224ENST00000554040 CFDP1Q9UEE9 299 aaPredicted RBP11.27□□□□□ -0.61
ATXN3-224ENST00000554040 CLTCQ00610 1675 aaKnown RBP11.27□□□□□ -0.61
ATXN3-224ENST00000554040 POTEAQ6S8J7 498 aa11.26□□□□□ -0.61
ATXN3-224ENST00000554040 SUPT6HQ7KZ85 1726 aaKnown RBP11.26□□□□□ -0.61
ATXN3-224ENST00000554040 GPATCH8Q9UKJ3 1502 aaKnown RBP11.25□□□□□ -0.61
ATXN3-224ENST00000554040 PLXNC1O60486 1568 aa11.25□□□□□ -0.61
ATXN3-224ENST00000554040 VWDEQ8N2E2 1590 aa11.25□□□□□ -0.61
ATXN3-224ENST00000554040 NEURL4Q96JN8 1562 aa11.25□□□□□ -0.61
ATXN3-224ENST00000554040 PHF14O94880 888 aa11.25□□□□□ -0.61
ATXN3-224ENST00000554040 COL9A1P20849 921 aa11.25□□□□□ -0.61
ATXN3-224ENST00000554040 NPHP4O75161 1426 aaPredicted RBP11.25□□□□□ -0.61
ATXN3-224ENST00000554040 SYCP2Q9BX26 1530 aa11.25□□□□□ -0.61
ATXN3-224ENST00000554040 CASKIN1Q8WXD9 1431 aa11.24□□□□□ -0.61
ATXN3-224ENST00000554040 MED14O60244 1454 aa11.24□□□□□ -0.61
ATXN3-224ENST00000554040 ATP7AQ04656 1500 aa11.24□□□□□ -0.61
ATXN3-224ENST00000554040 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
ATXN3-224ENST00000554040 DHX29Q7Z478 1369 aaKnown RBP11.23□□□□□ -0.61
ATXN3-224ENST00000554040 MIA2Q96PC5 1412 aa11.23□□□□□ -0.61
ATXN3-224ENST00000554040 CCDC18Q5T9S5 1454 aa11.23□□□□□ -0.61
ATXN3-224ENST00000554040 PLEKHH2Q8IVE3 1493 aa11.23□□□□□ -0.61
ATXN3-224ENST00000554040 LRRC7Q96NW7 1537 aa11.23□□□□□ -0.61
ATXN3-224ENST00000554040 PPP1R3GB7ZBB8 358 aa11.22□□□□□ -0.61
ATXN3-224ENST00000554040 KIF3BO15066 747 aa11.22□□□□□ -0.61
ATXN3-224ENST00000554040 WASHC2CQ9Y4E1 1318 aa11.22□□□□□ -0.61
ATXN3-224ENST00000554040 FBXW7Q969H0 707 aa11.21□□□□□ -0.61
ATXN3-224ENST00000554040 PLA2G2EQ9NZK7 142 aa11.21□□□□□ -0.61
ATXN3-224ENST00000554040 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.21□□□□□ -0.61
ATXN3-224ENST00000554040 FAM135AQ9P2D6 1515 aa11.2□□□□□ -0.62
ATXN3-224ENST00000554040 PZPP20742 1482 aa11.2□□□□□ -0.62
ATXN3-224ENST00000554040 PROX2Q3B8N5 592 aa11.2□□□□□ -0.62
ATXN3-224ENST00000554040 STAC3Q96MF2 364 aa11.2□□□□□ -0.62
ATXN3-224ENST00000554040 CDC42BPAQ5VT25 1732 aa11.2□□□□□ -0.62
ATXN3-224ENST00000554040 NLRP1Q9C000 1473 aa11.19□□□□□ -0.62
ATXN3-224ENST00000554040 CCNB3Q8WWL7 1395 aa11.19□□□□□ -0.62
ATXN3-224ENST00000554040 ZNF644Q9H582 1327 aaPredicted RBP11.19□□□□□ -0.62
ATXN3-224ENST00000554040 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
ATXN3-224ENST00000554040 RTEL1-TNFRSF6BF6WH68 1400 aa11.18□□□□□ -0.62
ATXN3-224ENST00000554040 LRRIQ1Q96JM4 1722 aa11.18□□□□□ -0.62
ATXN3-224ENST00000554040 INO80Q9ULG1 1556 aaPredicted RBP11.18□□□□□ -0.62
ATXN3-224ENST00000554040 FAM135BQ49AJ0 1406 aa11.18□□□□□ -0.62
ATXN3-224ENST00000554040 UGGT1Q9NYU2 1555 aa11.17□□□□□ -0.62
ATXN3-224ENST00000554040 PDIA6Q15084 440 aa11.17□□□□□ -0.62
ATXN3-224ENST00000554040 THSD4Q6ZMP0 1018 aa11.17□□□□□ -0.62
ATXN3-224ENST00000554040 EPAS1Q99814 870 aa11.17□□□□□ -0.62
ATXN3-224ENST00000554040 POLR1AO95602 1720 aaPredicted RBP11.17□□□□□ -0.62
ATXN3-224ENST00000554040 DDX12PQ92771 950 aa11.16□□□□□ -0.62
ATXN3-224ENST00000554040 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms