RNA–Protein interactions for RNA: ENST00000553967.1

TUBB3-203, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-203ENST00000553967 LRPPRCP42704 1394 aaKnown RBP23.46■■□□□ 1.35
TUBB3-203ENST00000553967 TECPR2O15040 1411 aa23.45■■□□□ 1.34
TUBB3-203ENST00000553967 CDC42BPGQ6DT37 1551 aa23.44■■□□□ 1.34
TUBB3-203ENST00000553967 PIK3C2GO75747 1445 aa23.44■■□□□ 1.34
TUBB3-203ENST00000553967 TMEM132EQ6IEE7 984 aa23.44■■□□□ 1.34
TUBB3-203ENST00000553967 WAPLQ7Z5K2 1190 aa23.44■■□□□ 1.34
TUBB3-203ENST00000553967 ABCC11Q96J66 1382 aa23.43■■□□□ 1.34
TUBB3-203ENST00000553967 ESCO1Q5FWF5 840 aa23.43■■□□□ 1.34
TUBB3-203ENST00000553967 ADAMTS2O95450 1211 aa23.42■■□□□ 1.34
TUBB3-203ENST00000553967 CDK12Q9NYV4 1490 aaPredicted RBP23.41■■□□□ 1.34
TUBB3-203ENST00000553967 NGLY1Q96IV0 654 aa23.4■■□□□ 1.34
TUBB3-203ENST00000553967 QTRT2Q9H974 415 aaKnown RBP23.4■■□□□ 1.34
TUBB3-203ENST00000553967 NPHP3Q7Z494 1330 aa23.39■■□□□ 1.34
TUBB3-203ENST00000553967 UPF1Q92900 1129 aaKnown RBP eCLIP23.39■■□□□ 1.33
TUBB3-203ENST00000553967 PLEKHH1Q9ULM0 1364 aa23.39■■□□□ 1.33
TUBB3-203ENST00000553967 YTHDC2Q9H6S0 1430 aaKnown RBP23.38■■□□□ 1.33
TUBB3-203ENST00000553967 KNDC1Q76NI1 1749 aa23.38■■□□□ 1.33
TUBB3-203ENST00000553967 NUTM2FA1L443 756 aa23.37■■□□□ 1.33
TUBB3-203ENST00000553967 C14orf93Q9H972 538 aaKnown RBP23.37■■□□□ 1.33
TUBB3-203ENST00000553967 RAB3GAP2Q9H2M9 1393 aa23.37■■□□□ 1.33
TUBB3-203ENST00000553967 FOXO3O43524 673 aa23.36■■□□□ 1.33
TUBB3-203ENST00000553967 RBM6P78332 1123 aaKnown RBP23.36■■□□□ 1.33
TUBB3-203ENST00000553967 XPCQ01831 940 aaPredicted RBP23.34■■□□□ 1.33
TUBB3-203ENST00000553967 SIRT1Q96EB6 747 aa23.34■■□□□ 1.33
TUBB3-203ENST00000553967 PXDNQ92626 1479 aa23.34■■□□□ 1.33
TUBB3-203ENST00000553967 NRXN1Q9ULB1 1477 aa23.34■■□□□ 1.33
TUBB3-203ENST00000553967 COL22A1Q8NFW1 1626 aaPredicted RBP23.33■■□□□ 1.33
TUBB3-203ENST00000553967 MYOM2P54296 1465 aa23.33■■□□□ 1.33
TUBB3-203ENST00000553967 CFAP70Q5T0N1 1121 aa23.33■■□□□ 1.33
TUBB3-203ENST00000553967 USP21Q9UK80 565 aa23.32■■□□□ 1.32
TUBB3-203ENST00000553967 DHX57Q6P158 1386 aaKnown RBP23.31■■□□□ 1.32
TUBB3-203ENST00000553967 RGS12O14924 1447 aa23.31■■□□□ 1.32
TUBB3-203ENST00000553967 FNBP4Q8N3X1 1017 aaPredicted RBP23.3■■□□□ 1.32
TUBB3-203ENST00000553967 FMN2Q9NZ56 1722 aa23.3■■□□□ 1.32
TUBB3-203ENST00000553967 TRPC5Q9UL62 973 aaPredicted RBP23.28■■□□□ 1.32
TUBB3-203ENST00000553967 PRAM1Q96QH2 718 aa23.25■■□□□ 1.31
TUBB3-203ENST00000553967 SAFB2Q14151 953 aaKnown RBP eCLIP23.24■■□□□ 1.31
TUBB3-203ENST00000553967 KIF1AQ12756 1690 aa23.24■■□□□ 1.31
TUBB3-203ENST00000553967 KRT28Q7Z3Y7 464 aa23.23■■□□□ 1.31
TUBB3-203ENST00000553967 SPATA31A3Q5VYP0 1347 aa23.23■■□□□ 1.31
TUBB3-203ENST00000553967 PHF8Q9UPP1 1060 aa23.22■■□□□ 1.31
TUBB3-203ENST00000553967 ATRNO75882 1429 aa23.22■■□□□ 1.31
TUBB3-203ENST00000553967 POGKQ9P215 609 aa23.21■■□□□ 1.31
TUBB3-203ENST00000553967 RGPD8O14715 1765 aaPredicted RBP23.2■■□□□ 1.3
TUBB3-203ENST00000553967 MARF1Q9Y4F3 1742 aaKnown RBP23.2■■□□□ 1.3
TUBB3-203ENST00000553967 DLC1Q96QB1 1528 aa23.2■■□□□ 1.3
TUBB3-203ENST00000553967 BCL9LQ86UU0 1499 aa23.2■■□□□ 1.3
TUBB3-203ENST00000553967 HRCP23327 699 aa23.19■■□□□ 1.3
TUBB3-203ENST00000553967 DCAF11Q8TEB1 546 aa23.19■■□□□ 1.3
TUBB3-203ENST00000553967 KDM2AQ9Y2K7 1162 aa23.19■■□□□ 1.3
TUBB3-203ENST00000553967 PSME1Q06323 249 aa23.18■■□□□ 1.3
TUBB3-203ENST00000553967 ADGRB1O14514 1584 aa23.18■■□□□ 1.3
TUBB3-203ENST00000553967 TRAK1Q9UPV9 953 aa23.17■■□□□ 1.3
TUBB3-203ENST00000553967 ATAD2Q6PL18 1390 aa23.15■■□□□ 1.3
TUBB3-203ENST00000553967 STAC3Q96MF2 364 aa23.15■■□□□ 1.3
TUBB3-203ENST00000553967 TNS3Q68CZ2 1445 aa23.15■■□□□ 1.3
TUBB3-203ENST00000553967 ANKARQ7Z5J8 1434 aa23.14■■□□□ 1.29
TUBB3-203ENST00000553967 GJD4Q96KN9 370 aaPredicted RBP23.13■■□□□ 1.29
TUBB3-203ENST00000553967 HIRIP3Q9BW71 556 aaPredicted RBP23.13■■□□□ 1.29
TUBB3-203ENST00000553967 SBNO1A3KN83 1393 aa23.13■■□□□ 1.29
TUBB3-203ENST00000553967 ADGRB2O60241 1585 aa23.12■■□□□ 1.29
TUBB3-203ENST00000553967 HAP1P54257 671 aaPredicted RBP23.12■■□□□ 1.29
TUBB3-203ENST00000553967 UNC5CLQ8IV45 518 aa23.12■■□□□ 1.29
TUBB3-203ENST00000553967 PMFBP1Q8TBY8 1022 aa23.12■■□□□ 1.29
TUBB3-203ENST00000553967 LMOD2Q6P5Q4 547 aa23.11■■□□□ 1.29
TUBB3-203ENST00000553967 CABLES1Q8TDN4 633 aa23.11■■□□□ 1.29
TUBB3-203ENST00000553967 SLIT2O94813 1529 aa23.11■■□□□ 1.29
TUBB3-203ENST00000553967 USP32Q8NFA0 1604 aa23.11■■□□□ 1.29
TUBB3-203ENST00000553967 MINK1Q8N4C8 1332 aaPredicted RBP23.1■■□□□ 1.29
TUBB3-203ENST00000553967 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.09■■□□□ 1.29
TUBB3-203ENST00000553967 PLEKHG5O94827 1062 aa23.09■■□□□ 1.29
TUBB3-203ENST00000553967 ARHGEF10O15013 1369 aa23.09■■□□□ 1.29
TUBB3-203ENST00000553967 EIF3AQ14152 1382 aaKnown RBP23.07■■□□□ 1.28
TUBB3-203ENST00000553967 EP400Q96L91 3159 aa23.07■■□□□ 1.28
TUBB3-203ENST00000553967 WASLO00401 505 aaPredicted RBP23.06■■□□□ 1.28
TUBB3-203ENST00000553967 PRR36Q9H6K5 1346 aa23.06■■□□□ 1.28
TUBB3-203ENST00000553967 RALGAPBQ86X10 1494 aa23.05■■□□□ 1.28
TUBB3-203ENST00000553967 TULP4Q9NRJ4 1543 aa23.03■■□□□ 1.28
TUBB3-203ENST00000553967 GPRASP1Q5JY77 1395 aa23.03■■□□□ 1.28
TUBB3-203ENST00000553967 GLI3P10071 1580 aa23.03■■□□□ 1.28
TUBB3-203ENST00000553967 VPS72Q15906 364 aa23.01■■□□□ 1.27
TUBB3-203ENST00000553967 ABCA3Q99758 1704 aa23.01■■□□□ 1.27
TUBB3-203ENST00000553967 TRPM3Q9HCF6 1732 aaPredicted RBP23■■□□□ 1.27
TUBB3-203ENST00000553967 FAM83GA6ND36 823 aa23■■□□□ 1.27
TUBB3-203ENST00000553967 CCDC125Q86Z20 511 aa23■■□□□ 1.27
TUBB3-203ENST00000553967 NGDNQ8NEJ9 315 aaKnown RBP22.99■■□□□ 1.27
TUBB3-203ENST00000553967 PLCH1Q4KWH8 1693 aa22.99■■□□□ 1.27
TUBB3-203ENST00000553967 ARHGEF28Q8N1W1 1705 aaKnown RBP22.99■■□□□ 1.27
TUBB3-203ENST00000553967 NWD2Q9ULI1 1742 aa22.98■■□□□ 1.27
TUBB3-203ENST00000553967 CCDC9Q9Y3X0 531 aaKnown RBP22.97■■□□□ 1.27
TUBB3-203ENST00000553967 ALS2Q96Q42 1657 aa22.96■■□□□ 1.27
TUBB3-203ENST00000553967 SEPT12Q8IYM1 358 aa22.95■■□□□ 1.26
TUBB3-203ENST00000553967 NUDT16Q96DE0 195 aaKnown RBP22.95■■□□□ 1.26
TUBB3-203ENST00000553967 PAK3O75914 559 aaPredicted RBP22.94■■□□□ 1.26
TUBB3-203ENST00000553967 ATP7BP35670 1465 aa22.93■■□□□ 1.26
TUBB3-203ENST00000553967 ONECUT3O60422 494 aaPredicted RBP22.93■■□□□ 1.26
TUBB3-203ENST00000553967 CDK19Q9BWU1 502 aa22.93■■□□□ 1.26
TUBB3-203ENST00000553967 BRWD3Q6RI45 1802 aa22.92■■□□□ 1.26
TUBB3-203ENST00000553967 BTG4Q9NY30 223 aa22.92■■□□□ 1.26
TUBB3-203ENST00000553967 ITSN1Q15811 1721 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms