RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 C19orf44Q9H6X5 657 aa19.18■□□□□ 0.66
PSMC6-205ENST00000553899 ADGRL3Q9HAR2 1447 aa19.17■□□□□ 0.66
PSMC6-205ENST00000553899 QRICH2Q9H0J4 1663 aa19.16■□□□□ 0.66
PSMC6-205ENST00000553899 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.15■□□□□ 0.66
PSMC6-205ENST00000553899 WAPLQ7Z5K2 1190 aa19.15■□□□□ 0.66
PSMC6-205ENST00000553899 CDC42BPGQ6DT37 1551 aa19.15■□□□□ 0.66
PSMC6-205ENST00000553899 PUS7Q96PZ0 661 aaKnown RBP19.14■□□□□ 0.65
PSMC6-205ENST00000553899 NALCNQ8IZF0 1738 aa19.14■□□□□ 0.65
PSMC6-205ENST00000553899 ST20-MTHFSA0A0A6YYL1 179 aa19.13■□□□□ 0.65
PSMC6-205ENST00000553899 MSH6P52701 1360 aa19.13■□□□□ 0.65
PSMC6-205ENST00000553899 PLEKHH1Q9ULM0 1364 aa19.13■□□□□ 0.65
PSMC6-205ENST00000553899 TESK2Q96S53 571 aa19.12■□□□□ 0.65
PSMC6-205ENST00000553899 CADPS2Q86UW7 1296 aa19.11■□□□□ 0.65
PSMC6-205ENST00000553899 CERKQ8TCT0 537 aa19.09■□□□□ 0.65
PSMC6-205ENST00000553899 EVC2Q86UK5 1308 aa19.08■□□□□ 0.65
PSMC6-205ENST00000553899 WASLO00401 505 aaPredicted RBP19.08■□□□□ 0.64
PSMC6-205ENST00000553899 HSPA5P11021 654 aaKnown RBP19.08■□□□□ 0.64
PSMC6-205ENST00000553899 CDCA8Q53HL2 280 aa19.08■□□□□ 0.64
PSMC6-205ENST00000553899 C14orf37Q86TY3 774 aa19.08■□□□□ 0.64
PSMC6-205ENST00000553899 ATF3P18847 181 aa19.07■□□□□ 0.64
PSMC6-205ENST00000553899 ANKARQ7Z5J8 1434 aa19.07■□□□□ 0.64
PSMC6-205ENST00000553899 FMN2Q9NZ56 1722 aa19.06■□□□□ 0.64
PSMC6-205ENST00000553899 TMF1P82094 1093 aa19.05■□□□□ 0.64
PSMC6-205ENST00000553899 MINK1Q8N4C8 1332 aaPredicted RBP19.04■□□□□ 0.64
PSMC6-205ENST00000553899 SAFB2Q14151 953 aaKnown RBP eCLIP19.04■□□□□ 0.64
PSMC6-205ENST00000553899 TULP4Q9NRJ4 1543 aa19.04■□□□□ 0.64
PSMC6-205ENST00000553899 RBM33Q96EV2 1170 aaKnown RBP19.02■□□□□ 0.64
PSMC6-205ENST00000553899 CDK19Q9BWU1 502 aa19.02■□□□□ 0.64
PSMC6-205ENST00000553899 TOM1O60784 492 aa19.01■□□□□ 0.63
PSMC6-205ENST00000553899 ATAD2Q6PL18 1390 aa19.01■□□□□ 0.63
PSMC6-205ENST00000553899 MST1RQ04912 1400 aa19■□□□□ 0.63
PSMC6-205ENST00000553899 ITSN1Q15811 1721 aa19■□□□□ 0.63
PSMC6-205ENST00000553899 HIRIP3Q9BW71 556 aaPredicted RBP19■□□□□ 0.63
PSMC6-205ENST00000553899 SLAIN2Q9P270 581 aa19■□□□□ 0.63
PSMC6-205ENST00000553899 NINLQ9Y2I6 1382 aa19■□□□□ 0.63
PSMC6-205ENST00000553899 CCDC61Q9Y6R9 512 aa18.99■□□□□ 0.63
PSMC6-205ENST00000553899 ATP7BP35670 1465 aa18.98■□□□□ 0.63
PSMC6-205ENST00000553899 C1orf167Q5SNV9 1468 aa18.98■□□□□ 0.63
PSMC6-205ENST00000553899 USP32Q8NFA0 1604 aa18.98■□□□□ 0.63
PSMC6-205ENST00000553899 SRPK2P78362 688 aaKnown RBP18.97■□□□□ 0.63
PSMC6-205ENST00000553899 DISP3Q9P2K9 1392 aa18.96■□□□□ 0.63
PSMC6-205ENST00000553899 TOPAZ1Q8N9V7 1692 aa18.96■□□□□ 0.63
PSMC6-205ENST00000553899 NUDT16Q96DE0 195 aaKnown RBP18.96■□□□□ 0.63
PSMC6-205ENST00000553899 KIF1AQ12756 1690 aa18.95■□□□□ 0.62
PSMC6-205ENST00000553899 PLEKHG3A1L390 1219 aa18.94■□□□□ 0.62
PSMC6-205ENST00000553899 PRR36Q9H6K5 1346 aa18.93■□□□□ 0.62
PSMC6-205ENST00000553899 RGPD8O14715 1765 aaPredicted RBP18.93■□□□□ 0.62
PSMC6-205ENST00000553899 CABP2Q9NPB3 220 aa18.92■□□□□ 0.62
PSMC6-205ENST00000553899 UBAP1LF5GYI3 381 aa18.91■□□□□ 0.62
PSMC6-205ENST00000553899 POLR3AO14802 1390 aaPredicted RBP18.91■□□□□ 0.62
PSMC6-205ENST00000553899 BRD4O60885 1362 aaPredicted RBP18.91■□□□□ 0.62
PSMC6-205ENST00000553899 C11orf95C9JLR9 678 aaPredicted RBP18.89■□□□□ 0.61
PSMC6-205ENST00000553899 ZNF692Q9BU19 519 aaPredicted RBP18.89■□□□□ 0.61
PSMC6-205ENST00000553899 PHF8Q9UPP1 1060 aa18.89■□□□□ 0.61
PSMC6-205ENST00000553899 KIF7Q2M1P5 1343 aa18.89■□□□□ 0.61
PSMC6-205ENST00000553899 PPIP5K1Q6PFW1 1433 aa18.89■□□□□ 0.61
PSMC6-205ENST00000553899 ESCO1Q5FWF5 840 aa18.88■□□□□ 0.61
PSMC6-205ENST00000553899 BRINP3Q76B58 766 aa18.88■□□□□ 0.61
PSMC6-205ENST00000553899 CCDC7Q96M83 1385 aa18.88■□□□□ 0.61
PSMC6-205ENST00000553899 CPSF1Q10570 1443 aaKnown RBP18.87■□□□□ 0.61
PSMC6-205ENST00000553899 WASHC2AQ641Q2 1341 aa18.87■□□□□ 0.61
PSMC6-205ENST00000553899 TERF2IPQ9NYB0 399 aa18.87■□□□□ 0.61
PSMC6-205ENST00000553899 ROBO1Q9Y6N7 1651 aa18.87■□□□□ 0.61
PSMC6-205ENST00000553899 MYOM1P52179 1685 aa18.86■□□□□ 0.61
PSMC6-205ENST00000553899 NPHP3Q7Z494 1330 aa18.86■□□□□ 0.61
PSMC6-205ENST00000553899 ORAI2Q96SN7 254 aa18.86■□□□□ 0.61
PSMC6-205ENST00000553899 CABP1Q9NZU7 370 aa18.86■□□□□ 0.61
PSMC6-205ENST00000553899 NHSL1Q5SYE7 1610 aa18.85■□□□□ 0.61
PSMC6-205ENST00000553899 AHDC1Q5TGY3 1603 aaPredicted RBP18.85■□□□□ 0.61
PSMC6-205ENST00000553899 AKAP12Q02952 1782 aa18.84■□□□□ 0.61
PSMC6-205ENST00000553899 NUTM2FA1L443 756 aa18.84■□□□□ 0.61
PSMC6-205ENST00000553899 ANKRD36BQ8N2N9 1353 aa18.83■□□□□ 0.61
PSMC6-205ENST00000553899 ZNF316A6NFI3 1004 aaPredicted RBP18.83■□□□□ 0.6
PSMC6-205ENST00000553899 CD163L1Q9NR16 1453 aa18.83■□□□□ 0.6
PSMC6-205ENST00000553899 ACEP12821 1306 aa18.82■□□□□ 0.6
PSMC6-205ENST00000553899 SLC12A5Q9H2X9 1139 aa18.82■□□□□ 0.6
PSMC6-205ENST00000553899 SOS2Q07890 1332 aaPredicted RBP18.81■□□□□ 0.6
PSMC6-205ENST00000553899 MON2Q7Z3U7 1717 aa18.81■□□□□ 0.6
PSMC6-205ENST00000553899 PSME1Q06323 249 aa18.81■□□□□ 0.6
PSMC6-205ENST00000553899 HDGFL2Q7Z4V5 671 aaPredicted RBP18.81■□□□□ 0.6
PSMC6-205ENST00000553899 NGDNQ8NEJ9 315 aaKnown RBP18.81■□□□□ 0.6
PSMC6-205ENST00000553899 TMC1Q8TDI8 760 aa18.8■□□□□ 0.6
PSMC6-205ENST00000553899 FBXO41Q8TF61 875 aa18.8■□□□□ 0.6
PSMC6-205ENST00000553899 SBNO1A3KN83 1393 aa18.8■□□□□ 0.6
PSMC6-205ENST00000553899 PXDNQ92626 1479 aa18.79■□□□□ 0.6
PSMC6-205ENST00000553899 FOXO3O43524 673 aa18.79■□□□□ 0.6
PSMC6-205ENST00000553899 PMFBP1Q8TBY8 1022 aa18.79■□□□□ 0.6
PSMC6-205ENST00000553899 USP6P35125 1406 aa18.79■□□□□ 0.6
PSMC6-205ENST00000553899 SSH2Q76I76 1423 aa18.79■□□□□ 0.6
PSMC6-205ENST00000553899 EDC4Q6P2E9 1401 aaKnown RBP18.78■□□□□ 0.6
PSMC6-205ENST00000553899 A0A1W2PP64 1363 aa18.78■□□□□ 0.6
PSMC6-205ENST00000553899 PIP4K2BP78356 416 aa18.77■□□□□ 0.6
PSMC6-205ENST00000553899 KTN1Q86UP2 1357 aaKnown RBP18.77■□□□□ 0.6
PSMC6-205ENST00000553899 TTC21AQ8NDW8 1320 aa18.76■□□□□ 0.59
PSMC6-205ENST00000553899 KRT28Q7Z3Y7 464 aa18.76■□□□□ 0.59
PSMC6-205ENST00000553899 TRPM3Q9HCF6 1732 aaPredicted RBP18.76■□□□□ 0.59
PSMC6-205ENST00000553899 NRKQ7Z2Y5 1582 aa18.76■□□□□ 0.59
PSMC6-205ENST00000553899 LRRC59Q96AG4 307 aaKnown RBP18.75■□□□□ 0.59
PSMC6-205ENST00000553899 PHLPP1O60346 1717 aa18.74■□□□□ 0.59
PSMC6-205ENST00000553899 COL16A1Q07092 1604 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms