RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 C14orf37Q86TY3 774 aa16.75■□□□□ 0.27
PSMC6-204ENST00000553798 CADPS2Q86UW7 1296 aa16.75■□□□□ 0.27
PSMC6-204ENST00000553798 TIMELESSQ9UNS1 1208 aa16.75■□□□□ 0.27
PSMC6-204ENST00000553798 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.74■□□□□ 0.27
PSMC6-204ENST00000553798 WAPLQ7Z5K2 1190 aa16.74■□□□□ 0.27
PSMC6-204ENST00000553798 CCER1Q8TC90 406 aaPredicted RBP16.74■□□□□ 0.27
PSMC6-204ENST00000553798 NBPF1Q3BBV0 1214 aa16.73■□□□□ 0.27
PSMC6-204ENST00000553798 ATF3P18847 181 aa16.72■□□□□ 0.27
PSMC6-204ENST00000553798 NBPF8Q3BBV2 869 aa16.72■□□□□ 0.27
PSMC6-204ENST00000553798 SLAIN2Q9P270 581 aa16.72■□□□□ 0.27
PSMC6-204ENST00000553798 NALCNQ8IZF0 1738 aa16.71■□□□□ 0.27
PSMC6-204ENST00000553798 RNF216Q9NWF9 866 aaPredicted RBP16.71■□□□□ 0.27
PSMC6-204ENST00000553798 TRAK1Q9UPV9 953 aa16.71■□□□□ 0.27
PSMC6-204ENST00000553798 PLEKHH1Q9ULM0 1364 aa16.71■□□□□ 0.27
PSMC6-204ENST00000553798 TRPM1Q7Z4N2 1603 aa16.7■□□□□ 0.26
PSMC6-204ENST00000553798 PIP4K2BP78356 416 aa16.7■□□□□ 0.26
PSMC6-204ENST00000553798 PRAM1Q96QH2 718 aa16.7■□□□□ 0.26
PSMC6-204ENST00000553798 GPRASP1Q5JY77 1395 aa16.68■□□□□ 0.26
PSMC6-204ENST00000553798 POGKQ9P215 609 aa16.67■□□□□ 0.26
PSMC6-204ENST00000553798 MST1RQ04912 1400 aa16.67■□□□□ 0.26
PSMC6-204ENST00000553798 CDC42BPGQ6DT37 1551 aa16.67■□□□□ 0.26
PSMC6-204ENST00000553798 ROCK2O75116 1388 aaKnown RBP16.65■□□□□ 0.26
PSMC6-204ENST00000553798 ARHGEF28Q8N1W1 1705 aaKnown RBP16.65■□□□□ 0.26
PSMC6-204ENST00000553798 RALGAPBQ86X10 1494 aa16.65■□□□□ 0.26
PSMC6-204ENST00000553798 ROBO1Q9Y6N7 1651 aa16.62■□□□□ 0.25
PSMC6-204ENST00000553798 C1orf167Q5SNV9 1468 aa16.62■□□□□ 0.25
PSMC6-204ENST00000553798 SAFB2Q14151 953 aaKnown RBP eCLIP16.62■□□□□ 0.25
PSMC6-204ENST00000553798 ADGRB2O60241 1585 aa16.62■□□□□ 0.25
PSMC6-204ENST00000553798 HSPA1LP34931 641 aa16.61■□□□□ 0.25
PSMC6-204ENST00000553798 BRINP3Q76B58 766 aa16.61■□□□□ 0.25
PSMC6-204ENST00000553798 CARD11Q9BXL7 1154 aa16.59■□□□□ 0.25
PSMC6-204ENST00000553798 MINK1Q8N4C8 1332 aaPredicted RBP16.59■□□□□ 0.25
PSMC6-204ENST00000553798 CENPJQ9HC77 1338 aaPredicted RBP16.59■□□□□ 0.25
PSMC6-204ENST00000553798 FMN2Q9NZ56 1722 aa16.59■□□□□ 0.25
PSMC6-204ENST00000553798 C1QBPQ07021 282 aaKnown RBP16.58■□□□□ 0.24
PSMC6-204ENST00000553798 WASLO00401 505 aaPredicted RBP16.57■□□□□ 0.24
PSMC6-204ENST00000553798 HIRIP3Q9BW71 556 aaPredicted RBP16.57■□□□□ 0.24
PSMC6-204ENST00000553798 ANKARQ7Z5J8 1434 aa16.56■□□□□ 0.24
PSMC6-204ENST00000553798 EIF3AQ14152 1382 aaKnown RBP16.56■□□□□ 0.24
PSMC6-204ENST00000553798 ORAI2Q96SN7 254 aa16.56■□□□□ 0.24
PSMC6-204ENST00000553798 AHDC1Q5TGY3 1603 aaPredicted RBP16.56■□□□□ 0.24
PSMC6-204ENST00000553798 ESCO1Q5FWF5 840 aa16.54■□□□□ 0.24
PSMC6-204ENST00000553798 NUTM2FA1L443 756 aa16.53■□□□□ 0.24
PSMC6-204ENST00000553798 TULP4Q9NRJ4 1543 aa16.53■□□□□ 0.24
PSMC6-204ENST00000553798 QRICH2Q9H0J4 1663 aa16.53■□□□□ 0.24
PSMC6-204ENST00000553798 NHSL1Q5SYE7 1610 aa16.52■□□□□ 0.24
PSMC6-204ENST00000553798 SBNO2Q9Y2G9 1366 aa16.52■□□□□ 0.24
PSMC6-204ENST00000553798 CDK19Q9BWU1 502 aa16.52■□□□□ 0.24
PSMC6-204ENST00000553798 USP32Q8NFA0 1604 aa16.52■□□□□ 0.23
PSMC6-204ENST00000553798 PRR36Q9H6K5 1346 aa16.51■□□□□ 0.23
PSMC6-204ENST00000553798 PHLPP1O60346 1717 aa16.51■□□□□ 0.23
PSMC6-204ENST00000553798 COL16A1Q07092 1604 aaPredicted RBP16.51■□□□□ 0.23
PSMC6-204ENST00000553798 SOS2Q07890 1332 aaPredicted RBP16.49■□□□□ 0.23
PSMC6-204ENST00000553798 NPHP3Q7Z494 1330 aa16.49■□□□□ 0.23
PSMC6-204ENST00000553798 RGPD8O14715 1765 aaPredicted RBP16.49■□□□□ 0.23
PSMC6-204ENST00000553798 NUDT16Q96DE0 195 aaKnown RBP16.49■□□□□ 0.23
PSMC6-204ENST00000553798 PHF8Q9UPP1 1060 aa16.49■□□□□ 0.23
PSMC6-204ENST00000553798 KIF1AQ12756 1690 aa16.49■□□□□ 0.23
PSMC6-204ENST00000553798 ATP7BP35670 1465 aa16.48■□□□□ 0.23
PSMC6-204ENST00000553798 FOXO3O43524 673 aa16.48■□□□□ 0.23
PSMC6-204ENST00000553798 DDX17Q92841 729 aaKnown RBP16.48■□□□□ 0.23
PSMC6-204ENST00000553798 EVC2Q86UK5 1308 aa16.47■□□□□ 0.23
PSMC6-204ENST00000553798 LRRC59Q96AG4 307 aaKnown RBP16.47■□□□□ 0.23
PSMC6-204ENST00000553798 CCDC61Q9Y6R9 512 aa16.47■□□□□ 0.23
PSMC6-204ENST00000553798 ST20-MTHFSA0A0A6YYL1 179 aa16.46■□□□□ 0.23
PSMC6-204ENST00000553798 SLC24A1O60721 1099 aa16.46■□□□□ 0.23
PSMC6-204ENST00000553798 TESK2Q96S53 571 aa16.46■□□□□ 0.23
PSMC6-204ENST00000553798 USP47Q96K76 1375 aa16.46■□□□□ 0.23
PSMC6-204ENST00000553798 JCADQ9P266 1359 aa16.46■□□□□ 0.23
PSMC6-204ENST00000553798 PXDNQ92626 1479 aa16.46■□□□□ 0.23
PSMC6-204ENST00000553798 SRPK2P78362 688 aaKnown RBP16.45■□□□□ 0.22
PSMC6-204ENST00000553798 PLEKHG3A1L390 1219 aa16.44■□□□□ 0.22
PSMC6-204ENST00000553798 PUS7Q96PZ0 661 aaKnown RBP16.44■□□□□ 0.22
PSMC6-204ENST00000553798 CABP2Q9NPB3 220 aa16.44■□□□□ 0.22
PSMC6-204ENST00000553798 ITSN1Q15811 1721 aa16.43■□□□□ 0.22
PSMC6-204ENST00000553798 PMFBP1Q8TBY8 1022 aa16.43■□□□□ 0.22
PSMC6-204ENST00000553798 TOPAZ1Q8N9V7 1692 aa16.43■□□□□ 0.22
PSMC6-204ENST00000553798 KRT28Q7Z3Y7 464 aa16.42■□□□□ 0.22
PSMC6-204ENST00000553798 POLR3AO14802 1390 aaPredicted RBP16.41■□□□□ 0.22
PSMC6-204ENST00000553798 SHPRHQ149N8 1683 aa16.41■□□□□ 0.22
PSMC6-204ENST00000553798 SPATA31A6Q5VVP1 1343 aa16.41■□□□□ 0.22
PSMC6-204ENST00000553798 XPCQ01831 940 aaPredicted RBP16.4■□□□□ 0.22
PSMC6-204ENST00000553798 PSME1Q06323 249 aa16.4■□□□□ 0.22
PSMC6-204ENST00000553798 SBNO1A3KN83 1393 aa16.39■□□□□ 0.21
PSMC6-204ENST00000553798 ATAD2Q6PL18 1390 aa16.39■□□□□ 0.21
PSMC6-204ENST00000553798 PNPLA6Q8IY17 1366 aa16.39■□□□□ 0.21
PSMC6-204ENST00000553798 PPIP5K1Q6PFW1 1433 aa16.39■□□□□ 0.21
PSMC6-204ENST00000553798 NGDNQ8NEJ9 315 aaKnown RBP16.39■□□□□ 0.21
PSMC6-204ENST00000553798 ACEP12821 1306 aa16.39■□□□□ 0.21
PSMC6-204ENST00000553798 SPATA31A3Q5VYP0 1347 aa16.39■□□□□ 0.21
PSMC6-204ENST00000553798 CABP1Q9NZU7 370 aa16.38■□□□□ 0.21
PSMC6-204ENST00000553798 EIF4G2P78344 907 aaKnown RBP eCLIP16.37■□□□□ 0.21
PSMC6-204ENST00000553798 TMF1P82094 1093 aa16.36■□□□□ 0.21
PSMC6-204ENST00000553798 COL22A1Q8NFW1 1626 aaPredicted RBP16.35■□□□□ 0.21
PSMC6-204ENST00000553798 TRPM3Q9HCF6 1732 aaPredicted RBP16.35■□□□□ 0.21
PSMC6-204ENST00000553798 BRD4O60885 1362 aaPredicted RBP16.35■□□□□ 0.21
PSMC6-204ENST00000553798 TNS3Q68CZ2 1445 aa16.35■□□□□ 0.21
PSMC6-204ENST00000553798 MED1Q15648 1581 aaPredicted RBP16.34■□□□□ 0.21
PSMC6-204ENST00000553798 HSPA5P11021 654 aaKnown RBP16.34■□□□□ 0.21
PSMC6-204ENST00000553798 DISP3Q9P2K9 1392 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms