RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 POGZQ7Z3K3 1410 aa9.04□□□□□ -0.96
LINC-ROR-201ENST00000553704 TNNT2P45379 298 aaPredicted RBP9.04□□□□□ -0.96
LINC-ROR-201ENST00000553704 SLC4A3P48751 1232 aa9.04□□□□□ -0.96
LINC-ROR-201ENST00000553704 RGS3P49796 1198 aa9.04□□□□□ -0.96
LINC-ROR-201ENST00000553704 ABCC3O15438 1527 aa9.04□□□□□ -0.96
LINC-ROR-201ENST00000553704 TULP4Q9NRJ4 1543 aa9.04□□□□□ -0.96
LINC-ROR-201ENST00000553704 NEFMP07197 916 aa9.03□□□□□ -0.96
LINC-ROR-201ENST00000553704 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.03□□□□□ -0.96
LINC-ROR-201ENST00000553704 E9PSI1 815 aa9.03□□□□□ -0.96
LINC-ROR-201ENST00000553704 TMEM132EQ6IEE7 984 aa9.03□□□□□ -0.96
LINC-ROR-201ENST00000553704 SLC12A5Q9H2X9 1139 aa9.03□□□□□ -0.96
LINC-ROR-201ENST00000553704 RRP7AQ9Y3A4 280 aaKnown RBP9.02□□□□□ -0.96
LINC-ROR-201ENST00000553704 PIK3C2BO00750 1634 aa9.02□□□□□ -0.97
LINC-ROR-201ENST00000553704 CFAP74Q9C0B2 1584 aa9.02□□□□□ -0.97
LINC-ROR-201ENST00000553704 IGHDP01880 384 aa9.01□□□□□ -0.97
LINC-ROR-201ENST00000553704 FAM161AQ3B820 660 aa9.01□□□□□ -0.97
LINC-ROR-201ENST00000553704 WWC1Q8IX03 1113 aa9.01□□□□□ -0.97
LINC-ROR-201ENST00000553704 NEXMIFQ5QGS0 1516 aa9.01□□□□□ -0.97
LINC-ROR-201ENST00000553704 PANK1Q8TE04 598 aa9.01□□□□□ -0.97
LINC-ROR-201ENST00000553704 MYO5BQ9ULV0 1848 aa9.01□□□□□ -0.97
LINC-ROR-201ENST00000553704 NEUROD2Q15784 382 aa9.01□□□□□ -0.97
LINC-ROR-201ENST00000553704 NUTM2DQ5VT03 806 aaPredicted RBP9.01□□□□□ -0.97
LINC-ROR-201ENST00000553704 GGT6Q6P531 493 aa9.01□□□□□ -0.97
LINC-ROR-201ENST00000553704 TNNQ9UQP3 1299 aa9.01□□□□□ -0.97
LINC-ROR-201ENST00000553704 MORC1Q86VD1 984 aa9□□□□□ -0.97
LINC-ROR-201ENST00000553704 DDRGK1Q96HY6 314 aa9□□□□□ -0.97
LINC-ROR-201ENST00000553704 C14orf93Q9H972 538 aaKnown RBP9□□□□□ -0.97
LINC-ROR-201ENST00000553704 MLH3Q9UHC1 1453 aa9□□□□□ -0.97
LINC-ROR-201ENST00000553704 COG6Q9Y2V7 657 aa9□□□□□ -0.97
LINC-ROR-201ENST00000553704 ADGRB2O60241 1585 aa8.99□□□□□ -0.97
LINC-ROR-201ENST00000553704 CD109Q6YHK3 1445 aa8.99□□□□□ -0.97
LINC-ROR-201ENST00000553704 DIP2CQ9Y2E4 1556 aa8.98□□□□□ -0.97
LINC-ROR-201ENST00000553704 TCP11L2Q8N4U5 519 aa8.98□□□□□ -0.97
LINC-ROR-201ENST00000553704 SENP3Q9H4L4 574 aaPredicted RBP8.98□□□□□ -0.97
LINC-ROR-201ENST00000553704 PPM1GO15355 546 aaPredicted RBP8.98□□□□□ -0.97
LINC-ROR-201ENST00000553704 PHF23Q9BUL5 403 aaPredicted RBP8.98□□□□□ -0.97
LINC-ROR-201ENST00000553704 BCL2L13Q9BXK5 485 aa8.98□□□□□ -0.97
LINC-ROR-201ENST00000553704 NLRP1Q9C000 1473 aa8.97□□□□□ -0.97
LINC-ROR-201ENST00000553704 RLBP1P12271 317 aa8.97□□□□□ -0.97
LINC-ROR-201ENST00000553704 CANXP27824 592 aaKnown RBP8.97□□□□□ -0.97
LINC-ROR-201ENST00000553704 MTHFSP49914 203 aa8.97□□□□□ -0.97
LINC-ROR-201ENST00000553704 FRAT1Q92837 279 aaPredicted RBP8.97□□□□□ -0.97
LINC-ROR-201ENST00000553704 CLUAP1Q96AJ1 413 aa8.97□□□□□ -0.97
LINC-ROR-201ENST00000553704 RUNDC1Q96C34 613 aa8.97□□□□□ -0.97
LINC-ROR-201ENST00000553704 USP19O94966 1318 aa8.97□□□□□ -0.97
LINC-ROR-201ENST00000553704 CGNL1Q0VF96 1302 aa8.97□□□□□ -0.97
LINC-ROR-201ENST00000553704 NINLQ9Y2I6 1382 aa8.97□□□□□ -0.97
LINC-ROR-201ENST00000553704 RARSP54136 660 aaKnown RBP8.96□□□□□ -0.97
LINC-ROR-201ENST00000553704 PDE3AQ14432 1141 aa8.96□□□□□ -0.97
LINC-ROR-201ENST00000553704 USP35Q9P2H5 1018 aa8.96□□□□□ -0.97
LINC-ROR-201ENST00000553704 SEC24BO95487 1268 aa8.96□□□□□ -0.98
LINC-ROR-201ENST00000553704 SAFB2Q14151 953 aaKnown RBP eCLIP8.96□□□□□ -0.98
LINC-ROR-201ENST00000553704 NFKBIBQ15653 356 aa8.96□□□□□ -0.98
LINC-ROR-201ENST00000553704 NGEFQ8N5V2 710 aa8.96□□□□□ -0.98
LINC-ROR-201ENST00000553704 ANKRD36BQ8N2N9 1353 aa8.95□□□□□ -0.98
LINC-ROR-201ENST00000553704 RICTORQ6R327 1708 aa8.95□□□□□ -0.98
LINC-ROR-201ENST00000553704 IL27Q8NEV9 243 aa8.95□□□□□ -0.98
LINC-ROR-201ENST00000553704 CABP2Q9NPB3 220 aa8.95□□□□□ -0.98
LINC-ROR-201ENST00000553704 ANKRD26Q9UPS8 1709 aa8.95□□□□□ -0.98
LINC-ROR-201ENST00000553704 RAPGEF3O95398 923 aa8.95□□□□□ -0.98
LINC-ROR-201ENST00000553704 A0A1W2PP64 1363 aa8.94□□□□□ -0.98
LINC-ROR-201ENST00000553704 COL3A1P02461 1466 aaPredicted RBP8.94□□□□□ -0.98
LINC-ROR-201ENST00000553704 PCDHB15Q9Y5E8 787 aa8.94□□□□□ -0.98
LINC-ROR-201ENST00000553704 RPGRIP1LQ68CZ1 1315 aa8.94□□□□□ -0.98
LINC-ROR-201ENST00000553704 PREX1Q8TCU6 1659 aa8.94□□□□□ -0.98
LINC-ROR-201ENST00000553704 PTPRMP28827 1452 aa8.93□□□□□ -0.98
LINC-ROR-201ENST00000553704 TMEM131LA2VDJ0 1609 aa8.93□□□□□ -0.98
LINC-ROR-201ENST00000553704 CLTCQ00610 1675 aaKnown RBP8.93□□□□□ -0.98
LINC-ROR-201ENST00000553704 EVC2Q86UK5 1308 aa8.93□□□□□ -0.98
LINC-ROR-201ENST00000553704 NSD2O96028 1365 aa8.92□□□□□ -0.98
LINC-ROR-201ENST00000553704 YEATS2Q9ULM3 1422 aa8.92□□□□□ -0.98
LINC-ROR-201ENST00000553704 CD163L1Q9NR16 1453 aa8.92□□□□□ -0.98
LINC-ROR-201ENST00000553704 U2AF1L5P0DN76 240 aaPredicted RBP8.92□□□□□ -0.98
LINC-ROR-201ENST00000553704 U2AF1Q01081 240 aaKnown RBP eCLIP8.92□□□□□ -0.98
LINC-ROR-201ENST00000553704 WDR63Q8IWG1 891 aa8.92□□□□□ -0.98
LINC-ROR-201ENST00000553704 TSR2Q969E8 191 aaKnown RBP8.92□□□□□ -0.98
LINC-ROR-201ENST00000553704 ABCC11Q96J66 1382 aa8.92□□□□□ -0.98
LINC-ROR-201ENST00000553704 MAPK8IP3Q9UPT6 1336 aa8.91□□□□□ -0.98
LINC-ROR-201ENST00000553704 CCDC27Q2M243 656 aa8.91□□□□□ -0.98
LINC-ROR-201ENST00000553704 CFAP53Q96M91 514 aa8.91□□□□□ -0.98
LINC-ROR-201ENST00000553704 STK26Q9P289 416 aa8.91□□□□□ -0.98
LINC-ROR-201ENST00000553704 KIF20BQ96Q89 1820 aa8.91□□□□□ -0.98
LINC-ROR-201ENST00000553704 NEO1Q92859 1461 aa8.91□□□□□ -0.98
LINC-ROR-201ENST00000553704 FRAT2O75474 233 aaPredicted RBP8.91□□□□□ -0.98
LINC-ROR-201ENST00000553704 NPM1P06748 294 aaKnown RBP eCLIP8.91□□□□□ -0.98
LINC-ROR-201ENST00000553704 IDI1Q13907 227 aa8.91□□□□□ -0.98
LINC-ROR-201ENST00000553704 GGNBP2Q9H3C7 697 aa8.91□□□□□ -0.98
LINC-ROR-201ENST00000553704 ARHGAP31Q2M1Z3 1444 aa8.9□□□□□ -0.98
LINC-ROR-201ENST00000553704 PDZRN3Q9UPQ7 1066 aa8.9□□□□□ -0.98
LINC-ROR-201ENST00000553704 VGFO15240 615 aaPredicted RBP8.89□□□□□ -0.99
LINC-ROR-201ENST00000553704 MINK1Q8N4C8 1332 aaPredicted RBP8.89□□□□□ -0.99
LINC-ROR-201ENST00000553704 GSE1Q14687 1217 aa8.89□□□□□ -0.99
LINC-ROR-201ENST00000553704 PLEKHF1Q96S99 279 aa8.89□□□□□ -0.99
LINC-ROR-201ENST00000553704 LRRC7Q96NW7 1537 aa8.89□□□□□ -0.99
LINC-ROR-201ENST00000553704 U2SURPO15042 1029 aaKnown RBP8.88□□□□□ -0.99
LINC-ROR-201ENST00000553704 SRPK2P78362 688 aaKnown RBP8.88□□□□□ -0.99
LINC-ROR-201ENST00000553704 MYH16Q9H6N6 1097 aa8.88□□□□□ -0.99
LINC-ROR-201ENST00000553704 TRIM35Q9UPQ4 493 aa8.88□□□□□ -0.99
LINC-ROR-201ENST00000553704 MVPQ14764 893 aaKnown RBP8.88□□□□□ -0.99
LINC-ROR-201ENST00000553704 PMFBP1Q8TBY8 1022 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms