RNA–Protein interactions for RNA: ENST00000553681.5

APEX1-206, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-206ENST00000553681 ESCO1Q5FWF5 840 aa16.98■□□□□ 0.31
APEX1-206ENST00000553681 WAPLQ7Z5K2 1190 aa16.98■□□□□ 0.31
APEX1-206ENST00000553681 SOS2Q07890 1332 aaPredicted RBP16.97■□□□□ 0.31
APEX1-206ENST00000553681 TMEM132EQ6IEE7 984 aa16.96■□□□□ 0.31
APEX1-206ENST00000553681 PLEKHH1Q9ULM0 1364 aa16.95■□□□□ 0.3
APEX1-206ENST00000553681 FOXO3O43524 673 aa16.95■□□□□ 0.3
APEX1-206ENST00000553681 LAMC1P11047 1609 aa16.95■□□□□ 0.3
APEX1-206ENST00000553681 HFM1A2PYH4 1435 aa16.94■□□□□ 0.3
APEX1-206ENST00000553681 TRPC5Q9UL62 973 aaPredicted RBP16.91■□□□□ 0.3
APEX1-206ENST00000553681 PXDNQ92626 1479 aa16.91■□□□□ 0.3
APEX1-206ENST00000553681 ATRNO75882 1429 aa16.9■□□□□ 0.3
APEX1-206ENST00000553681 MYOM2P54296 1465 aa16.9■□□□□ 0.3
APEX1-206ENST00000553681 RPGRIP1LQ68CZ1 1315 aa16.9■□□□□ 0.3
APEX1-206ENST00000553681 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.3
APEX1-206ENST00000553681 COL22A1Q8NFW1 1626 aaPredicted RBP16.89■□□□□ 0.29
APEX1-206ENST00000553681 ATAD2Q6PL18 1390 aa16.89■□□□□ 0.29
APEX1-206ENST00000553681 SAFB2Q14151 953 aaKnown RBP eCLIP16.88■□□□□ 0.29
APEX1-206ENST00000553681 FNBP4Q8N3X1 1017 aaPredicted RBP16.88■□□□□ 0.29
APEX1-206ENST00000553681 NPHP3Q7Z494 1330 aa16.88■□□□□ 0.29
APEX1-206ENST00000553681 CCDC144AA2RUR9 1427 aa16.87■□□□□ 0.29
APEX1-206ENST00000553681 MARF1Q9Y4F3 1742 aaKnown RBP16.87■□□□□ 0.29
APEX1-206ENST00000553681 RGPD8O14715 1765 aaPredicted RBP16.87■□□□□ 0.29
APEX1-206ENST00000553681 IFT172Q9UG01 1749 aa16.87■□□□□ 0.29
APEX1-206ENST00000553681 BCL9LQ86UU0 1499 aa16.86■□□□□ 0.29
APEX1-206ENST00000553681 CABLES1Q8TDN4 633 aa16.86■□□□□ 0.29
APEX1-206ENST00000553681 PRAG1Q86YV5 1406 aa16.86■□□□□ 0.29
APEX1-206ENST00000553681 SPATA31E1Q6ZUB1 1445 aa16.85■□□□□ 0.29
APEX1-206ENST00000553681 MPHOSPH9Q99550 1183 aa16.84■□□□□ 0.29
APEX1-206ENST00000553681 LRPPRCP42704 1394 aaKnown RBP16.84■□□□□ 0.29
APEX1-206ENST00000553681 FMN2Q9NZ56 1722 aa16.84■□□□□ 0.29
APEX1-206ENST00000553681 LMOD2Q6P5Q4 547 aa16.82■□□□□ 0.28
APEX1-206ENST00000553681 GJD4Q96KN9 370 aaPredicted RBP16.82■□□□□ 0.28
APEX1-206ENST00000553681 BRWD3Q6RI45 1802 aa16.82■□□□□ 0.28
APEX1-206ENST00000553681 KNDC1Q76NI1 1749 aa16.82■□□□□ 0.28
APEX1-206ENST00000553681 GLI3P10071 1580 aa16.81■□□□□ 0.28
APEX1-206ENST00000553681 YTHDC2Q9H6S0 1430 aaKnown RBP16.81■□□□□ 0.28
APEX1-206ENST00000553681 KRT28Q7Z3Y7 464 aa16.81■□□□□ 0.28
APEX1-206ENST00000553681 TECPR2O15040 1411 aa16.8■□□□□ 0.28
APEX1-206ENST00000553681 PIK3C2GO75747 1445 aa16.8■□□□□ 0.28
APEX1-206ENST00000553681 HAP1P54257 671 aaPredicted RBP16.8■□□□□ 0.28
APEX1-206ENST00000553681 CFAP70Q5T0N1 1121 aa16.8■□□□□ 0.28
APEX1-206ENST00000553681 RALGAPBQ86X10 1494 aa16.8■□□□□ 0.28
APEX1-206ENST00000553681 SPATA31A3Q5VYP0 1347 aa16.79■□□□□ 0.28
APEX1-206ENST00000553681 ABCC11Q96J66 1382 aa16.78■□□□□ 0.28
APEX1-206ENST00000553681 DEFB132Q7Z7B7 95 aa16.78■□□□□ 0.28
APEX1-206ENST00000553681 PMFBP1Q8TBY8 1022 aa16.78■□□□□ 0.28
APEX1-206ENST00000553681 CCDC9Q9Y3X0 531 aaKnown RBP16.78■□□□□ 0.28
APEX1-206ENST00000553681 EP400Q96L91 3159 aa16.78■□□□□ 0.28
APEX1-206ENST00000553681 USP32Q8NFA0 1604 aa16.78■□□□□ 0.28
APEX1-206ENST00000553681 ANKRD30BQ9BXX2 1392 aa16.77■□□□□ 0.28
APEX1-206ENST00000553681 UNC5CLQ8IV45 518 aa16.77■□□□□ 0.28
APEX1-206ENST00000553681 ZRANB1Q9UGI0 708 aa16.77■□□□□ 0.28
APEX1-206ENST00000553681 KIF1AQ12756 1690 aa16.76■□□□□ 0.27
APEX1-206ENST00000553681 PRAM1Q96QH2 718 aa16.76■□□□□ 0.27
APEX1-206ENST00000553681 HIRIP3Q9BW71 556 aaPredicted RBP16.76■□□□□ 0.27
APEX1-206ENST00000553681 PHF8Q9UPP1 1060 aa16.76■□□□□ 0.27
APEX1-206ENST00000553681 SRCAPQ6ZRS2 3230 aa16.76■□□□□ 0.27
APEX1-206ENST00000553681 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.76■□□□□ 0.27
APEX1-206ENST00000553681 SLIT2O94813 1529 aa16.75■□□□□ 0.27
APEX1-206ENST00000553681 PLCH1Q4KWH8 1693 aa16.75■□□□□ 0.27
APEX1-206ENST00000553681 ABCA3Q99758 1704 aa16.74■□□□□ 0.27
APEX1-206ENST00000553681 TNS3Q68CZ2 1445 aa16.74■□□□□ 0.27
APEX1-206ENST00000553681 A0A0G2JS52 829 aa16.73■□□□□ 0.27
APEX1-206ENST00000553681 MYT1Q01538 1121 aa16.73■□□□□ 0.27
APEX1-206ENST00000553681 SEPT12Q8IYM1 358 aa16.73■□□□□ 0.27
APEX1-206ENST00000553681 C14orf93Q9H972 538 aaKnown RBP16.72■□□□□ 0.27
APEX1-206ENST00000553681 PSME1Q06323 249 aa16.71■□□□□ 0.27
APEX1-206ENST00000553681 FAM182BQ5T319 152 aa16.71■□□□□ 0.27
APEX1-206ENST00000553681 KDM2AQ9Y2K7 1162 aa16.71■□□□□ 0.27
APEX1-206ENST00000553681 MINK1Q8N4C8 1332 aaPredicted RBP16.7■□□□□ 0.26
APEX1-206ENST00000553681 POGKQ9P215 609 aa16.7■□□□□ 0.26
APEX1-206ENST00000553681 TRAK1Q9UPV9 953 aa16.7■□□□□ 0.26
APEX1-206ENST00000553681 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
APEX1-206ENST00000553681 FAM83GA6ND36 823 aa16.69■□□□□ 0.26
APEX1-206ENST00000553681 NRXN1Q9ULB1 1477 aa16.68■□□□□ 0.26
APEX1-206ENST00000553681 BLMP54132 1417 aaPredicted RBP16.68■□□□□ 0.26
APEX1-206ENST00000553681 PSDA5PKW4 1024 aaPredicted RBP16.67■□□□□ 0.26
APEX1-206ENST00000553681 VPS72Q15906 364 aa16.67■□□□□ 0.26
APEX1-206ENST00000553681 FAM98CQ17RN3 349 aaKnown RBP16.66■□□□□ 0.26
APEX1-206ENST00000553681 PRR36Q9H6K5 1346 aa16.66■□□□□ 0.26
APEX1-206ENST00000553681 TRPM3Q9HCF6 1732 aaPredicted RBP16.65■□□□□ 0.26
APEX1-206ENST00000553681 RAB3GAP2Q9H2M9 1393 aa16.64■□□□□ 0.26
APEX1-206ENST00000553681 SF3B2Q13435 895 aaKnown RBP16.64■□□□□ 0.25
APEX1-206ENST00000553681 KRT27Q7Z3Y8 459 aa16.64■□□□□ 0.25
APEX1-206ENST00000553681 CCDC125Q86Z20 511 aa16.64■□□□□ 0.25
APEX1-206ENST00000553681 BTG4Q9NY30 223 aa16.64■□□□□ 0.25
APEX1-206ENST00000553681 NRAPQ86VF7 1730 aa16.64■□□□□ 0.25
APEX1-206ENST00000553681 NWD2Q9ULI1 1742 aa16.64■□□□□ 0.25
APEX1-206ENST00000553681 SBNO1A3KN83 1393 aa16.64■□□□□ 0.25
APEX1-206ENST00000553681 PAK3O75914 559 aaPredicted RBP16.63■□□□□ 0.25
APEX1-206ENST00000553681 ADGRB1O14514 1584 aa16.63■□□□□ 0.25
APEX1-206ENST00000553681 NUTM2GQ5VZR2 741 aa16.62■□□□□ 0.25
APEX1-206ENST00000553681 DCAF11Q8TEB1 546 aa16.62■□□□□ 0.25
APEX1-206ENST00000553681 SIRT1Q96EB6 747 aa16.62■□□□□ 0.25
APEX1-206ENST00000553681 ARHGEF10O15013 1369 aa16.62■□□□□ 0.25
APEX1-206ENST00000553681 ALS2Q96Q42 1657 aa16.6■□□□□ 0.25
APEX1-206ENST00000553681 CHRNA2Q15822 529 aa16.6■□□□□ 0.25
APEX1-206ENST00000553681 DLC1Q96QB1 1528 aa16.6■□□□□ 0.25
APEX1-206ENST00000553681 ACIN1Q9UKV3 1341 aaKnown RBP16.59■□□□□ 0.25
APEX1-206ENST00000553681 ANKARQ7Z5J8 1434 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms