RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 NUTM2EB1AL46 878 aaPredicted RBP6.96□□□□□ -1.3
TDP1-207ENST00000553617 FDX1P10109 184 aa6.96□□□□□ -1.3
TDP1-207ENST00000553617 NUTM2DQ5VT03 806 aaPredicted RBP6.96□□□□□ -1.3
TDP1-207ENST00000553617 DMRTA1Q5VZB9 504 aa6.96□□□□□ -1.3
TDP1-207ENST00000553617 NUTM2AQ8IVF1 878 aaPredicted RBP6.96□□□□□ -1.3
TDP1-207ENST00000553617 CALR3Q96L12 384 aaKnown RBP6.96□□□□□ -1.3
TDP1-207ENST00000553617 HCSTQ9UBK5 93 aa6.96□□□□□ -1.3
TDP1-207ENST00000553617 NDUFB9Q9Y6M9 179 aa6.96□□□□□ -1.3
TDP1-207ENST00000553617 TK2O00142 265 aa6.95□□□□□ -1.3
TDP1-207ENST00000553617 PPP1R15AO75807 674 aaPredicted RBP6.95□□□□□ -1.3
TDP1-207ENST00000553617 HLA-CQ95604 372 aa6.95□□□□□ -1.3
TDP1-207ENST00000553617 TRIM34Q9BYJ4 488 aa6.95□□□□□ -1.3
TDP1-207ENST00000553617 KIAA1468Q9P260 1216 aa6.95□□□□□ -1.3
TDP1-207ENST00000553617 GUCA2AQ02747 115 aa6.94□□□□□ -1.3
TDP1-207ENST00000553617 SWT1Q5T5J6 900 aaKnown RBP6.94□□□□□ -1.3
TDP1-207ENST00000553617 RSPH4AQ5TD94 716 aa6.94□□□□□ -1.3
TDP1-207ENST00000553617 KCTD17Q8N5Z5 321 aa6.94□□□□□ -1.3
TDP1-207ENST00000553617 ADAMTS19Q8TE59 1207 aa6.94□□□□□ -1.3
TDP1-207ENST00000553617 HMX1Q9NP08 348 aaPredicted RBP6.94□□□□□ -1.3
TDP1-207ENST00000553617 HRO43593 1189 aa6.93□□□□□ -1.3
TDP1-207ENST00000553617 CTDSPL2Q05D32 466 aa6.93□□□□□ -1.3
TDP1-207ENST00000553617 MTMR2Q13614 643 aa6.93□□□□□ -1.3
TDP1-207ENST00000553617 SLC4A5Q9BY07 1137 aa6.93□□□□□ -1.3
TDP1-207ENST00000553617 PLA2G2EQ9NZK7 142 aa6.93□□□□□ -1.3
TDP1-207ENST00000553617 SEPT9Q9UHD8 586 aaPredicted RBP6.93□□□□□ -1.3
TDP1-207ENST00000553617 RABGEF1Q9UJ41 708 aa6.93□□□□□ -1.3
TDP1-207ENST00000553617 CFAP99D6REC4 459 aa6.91□□□□□ -1.3
TDP1-207ENST00000553617 WASHC4Q2M389 1173 aa6.91□□□□□ -1.3
TDP1-207ENST00000553617 KCNH8Q96L42 1107 aa6.91□□□□□ -1.3
TDP1-207ENST00000553617 CCDC9Q9Y3X0 531 aaKnown RBP6.91□□□□□ -1.3
TDP1-207ENST00000553617 HELBQ8NG08 1087 aaPredicted RBP6.9□□□□□ -1.3
TDP1-207ENST00000553617 SRPK2P78362 688 aaKnown RBP6.89□□□□□ -1.31
TDP1-207ENST00000553617 CFAP70Q5T0N1 1121 aa6.89□□□□□ -1.31
TDP1-207ENST00000553617 HDGFL1Q5TGJ6 251 aa6.89□□□□□ -1.31
TDP1-207ENST00000553617 LRRN4Q8WUT4 740 aa6.89□□□□□ -1.31
TDP1-207ENST00000553617 FUT2Q10981 343 aa6.88□□□□□ -1.31
TDP1-207ENST00000553617 FAM98CQ17RN3 349 aaKnown RBP6.88□□□□□ -1.31
TDP1-207ENST00000553617 NPM2Q86SE8 214 aaKnown RBP6.88□□□□□ -1.31
TDP1-207ENST00000553617 PBXIP1Q96AQ6 731 aa6.88□□□□□ -1.31
TDP1-207ENST00000553617 ALG2Q9H553 416 aa6.88□□□□□ -1.31
TDP1-207ENST00000553617 RANGAP1P46060 587 aaPredicted RBP6.87□□□□□ -1.31
TDP1-207ENST00000553617 GRIPAP1Q4V328 841 aa6.87□□□□□ -1.31
TDP1-207ENST00000553617 SLF2Q8IX21 1173 aa6.87□□□□□ -1.31
TDP1-207ENST00000553617 EPS8L1Q8TE68 723 aa6.87□□□□□ -1.31
TDP1-207ENST00000553617 ACIN1Q9UKV3 1341 aaKnown RBP6.86□□□□□ -1.31
TDP1-207ENST00000553617 CFHP08603 1231 aa6.86□□□□□ -1.31
TDP1-207ENST00000553617 VAC14Q08AM6 782 aa6.86□□□□□ -1.31
TDP1-207ENST00000553617 SAMD7Q7Z3H4 446 aa6.86□□□□□ -1.31
TDP1-207ENST00000553617 AEBP1Q8IUX7 1158 aa6.86□□□□□ -1.31
TDP1-207ENST00000553617 PPP1R12CQ9BZL4 782 aa6.86□□□□□ -1.31
TDP1-207ENST00000553617 VPS9D1Q9Y2B5 631 aa6.86□□□□□ -1.31
TDP1-207ENST00000553617 C6orf229H3BNL8 230 aa6.85□□□□□ -1.31
TDP1-207ENST00000553617 ATP6V1AP38606 617 aa6.85□□□□□ -1.31
TDP1-207ENST00000553617 PDE4CQ08493 712 aa6.85□□□□□ -1.31
TDP1-207ENST00000553617 LAPTM4BQ86VI4 370 aa6.85□□□□□ -1.31
TDP1-207ENST00000553617 KCTD12Q96CX2 325 aaKnown RBP6.85□□□□□ -1.31
TDP1-207ENST00000553617 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.84□□□□□ -1.31
TDP1-207ENST00000553617 BHMG1C9JSJ3 638 aaPredicted RBP6.84□□□□□ -1.31
TDP1-207ENST00000553617 SLC4A3P48751 1232 aa6.84□□□□□ -1.31
TDP1-207ENST00000553617 HDGFP51858 240 aaKnown RBP6.84□□□□□ -1.31
TDP1-207ENST00000553617 PRR7Q8TB68 274 aa6.84□□□□□ -1.31
TDP1-207ENST00000553617 TSC1Q92574 1164 aa6.84□□□□□ -1.31
TDP1-207ENST00000553617 SYMPKQ92797 1274 aaKnown RBP6.84□□□□□ -1.31
TDP1-207ENST00000553617 STAC3Q96MF2 364 aa6.84□□□□□ -1.31
TDP1-207ENST00000553617 UCN2Q96RP3 112 aa6.84□□□□□ -1.31
TDP1-207ENST00000553617 USTQ9Y2C2 406 aa6.84□□□□□ -1.31
TDP1-207ENST00000553617 PER1O15534 1290 aaPredicted RBP6.83□□□□□ -1.32
TDP1-207ENST00000553617 SOX11P35716 441 aa6.83□□□□□ -1.32
TDP1-207ENST00000553617 DESI1Q6ICB0 168 aa6.83□□□□□ -1.32
TDP1-207ENST00000553617 RETREG3Q86VR2 466 aa6.83□□□□□ -1.32
TDP1-207ENST00000553617 PALM3A6NDB9 673 aaPredicted RBP6.82□□□□□ -1.32
TDP1-207ENST00000553617 NR6A1Q15406 480 aa6.82□□□□□ -1.32
TDP1-207ENST00000553617 MORN1Q5T089 497 aa6.82□□□□□ -1.32
TDP1-207ENST00000553617 RNF40O75150 1001 aa6.81□□□□□ -1.32
TDP1-207ENST00000553617 RFX1P22670 979 aa6.81□□□□□ -1.32
TDP1-207ENST00000553617 ACTN4O43707 911 aaKnown RBP6.8□□□□□ -1.32
TDP1-207ENST00000553617 BRD1O95696 1058 aa6.8□□□□□ -1.32
TDP1-207ENST00000553617 KMT5BQ4FZB7 885 aa6.8□□□□□ -1.32
TDP1-207ENST00000553617 ZFRQ96KR1 1074 aaKnown RBP6.8□□□□□ -1.32
TDP1-207ENST00000553617 NBPF3Q9H094 633 aa6.8□□□□□ -1.32
TDP1-207ENST00000553617 SLC27A5Q9Y2P5 690 aa6.79□□□□□ -1.32
TDP1-207ENST00000553617 MAFBQ9Y5Q3 323 aaPredicted RBP6.79□□□□□ -1.32
TDP1-207ENST00000553617 PATL2C9JE40 543 aaKnown RBP6.78□□□□□ -1.32
TDP1-207ENST00000553617 ATG7O95352 703 aa6.78□□□□□ -1.32
TDP1-207ENST00000553617 CSB-PGBD3P0DP91 1061 aa6.78□□□□□ -1.32
TDP1-207ENST00000553617 LMOD1P29536 600 aaPredicted RBP6.78□□□□□ -1.32
TDP1-207ENST00000553617 KCNA1Q09470 495 aa6.78□□□□□ -1.32
TDP1-207ENST00000553617 Q3C1V9 767 aa6.78□□□□□ -1.32
TDP1-207ENST00000553617 TMCO4Q5TGY1 634 aa6.78□□□□□ -1.32
TDP1-207ENST00000553617 LYPD8Q6UX82 237 aa6.78□□□□□ -1.32
TDP1-207ENST00000553617 RGS22Q8NE09 1264 aa6.78□□□□□ -1.32
TDP1-207ENST00000553617 GZF1Q9H116 711 aaPredicted RBP6.78□□□□□ -1.32
TDP1-207ENST00000553617 TFIP11Q9UBB9 837 aaKnown RBP6.78□□□□□ -1.32
TDP1-207ENST00000553617 PTPN5P54829 565 aa6.77□□□□□ -1.33
TDP1-207ENST00000553617 PUS10Q3MIT2 529 aaKnown RBP6.77□□□□□ -1.33
TDP1-207ENST00000553617 TMEM88BA6NKF7 163 aa6.76□□□□□ -1.33
TDP1-207ENST00000553617 F12P00748 615 aaPredicted RBP6.76□□□□□ -1.33
TDP1-207ENST00000553617 NR1H3Q13133 447 aa6.76□□□□□ -1.33
TDP1-207ENST00000553617 SEMA3FQ13275 785 aa6.76□□□□□ -1.33
TDP1-207ENST00000553617 IFFO2Q5TF58 517 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms