RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SLC52A1Q9NWF4 448 aa17.07■□□□□ 0.32
SHMT2-205ENST00000553474 CENPJQ9HC77 1338 aaPredicted RBP17.07■□□□□ 0.32
SHMT2-205ENST00000553474 A2ML1A8K2U0 1454 aa17.07■□□□□ 0.32
SHMT2-205ENST00000553474 ADAMTS8Q9UP79 889 aa17.07■□□□□ 0.32
SHMT2-205ENST00000553474 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
SHMT2-205ENST00000553474 QRICH2Q9H0J4 1663 aa17.06■□□□□ 0.32
SHMT2-205ENST00000553474 ZNF521Q96K83 1311 aa17.04■□□□□ 0.32
SHMT2-205ENST00000553474 ZFYVE9O95405 1425 aa17.03■□□□□ 0.32
SHMT2-205ENST00000553474 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.31
SHMT2-205ENST00000553474 CDCA7LQ96GN5 454 aa17.02■□□□□ 0.31
SHMT2-205ENST00000553474 POLR3AO14802 1390 aaPredicted RBP17.01■□□□□ 0.31
SHMT2-205ENST00000553474 SALL2Q9Y467 1007 aaPredicted RBP17.01■□□□□ 0.31
SHMT2-205ENST00000553474 NEXMIFQ5QGS0 1516 aa17.01■□□□□ 0.31
SHMT2-205ENST00000553474 GOLGA2Q08379 1002 aa17■□□□□ 0.31
SHMT2-205ENST00000553474 LMTK3Q96Q04 1460 aa16.99■□□□□ 0.31
SHMT2-205ENST00000553474 ARHGEF28Q8N1W1 1705 aaKnown RBP16.98■□□□□ 0.31
SHMT2-205ENST00000553474 SENP3-EIF4A1A0A087X0R7 540 aa16.98■□□□□ 0.31
SHMT2-205ENST00000553474 NUTM2DQ5VT03 806 aaPredicted RBP16.98■□□□□ 0.31
SHMT2-205ENST00000553474 AEBP2Q6ZN18 517 aaPredicted RBP16.98■□□□□ 0.31
SHMT2-205ENST00000553474 EXOC6Q8TAG9 804 aa16.98■□□□□ 0.31
SHMT2-205ENST00000553474 PLEKHH1Q9ULM0 1364 aa16.98■□□□□ 0.31
SHMT2-205ENST00000553474 TCERG1O14776 1098 aaKnown RBP16.97■□□□□ 0.31
SHMT2-205ENST00000553474 DUSP27Q5VZP5 1158 aa16.97■□□□□ 0.31
SHMT2-205ENST00000553474 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.97■□□□□ 0.31
SHMT2-205ENST00000553474 SENP3Q9H4L4 574 aaPredicted RBP16.97■□□□□ 0.31
SHMT2-205ENST00000553474 CARD14Q9BXL6 1004 aa16.97■□□□□ 0.31
SHMT2-205ENST00000553474 NSD2O96028 1365 aa16.96■□□□□ 0.31
SHMT2-205ENST00000553474 RIMS2Q9UQ26 1411 aa16.96■□□□□ 0.31
SHMT2-205ENST00000553474 MSH5O43196 834 aa16.96■□□□□ 0.31
SHMT2-205ENST00000553474 NINLQ9Y2I6 1382 aa16.96■□□□□ 0.31
SHMT2-205ENST00000553474 MS4A1P11836 297 aa16.95■□□□□ 0.3
SHMT2-205ENST00000553474 HSPA2P54652 639 aa16.95■□□□□ 0.3
SHMT2-205ENST00000553474 TRMT2AQ8IZ69 625 aaKnown RBP16.95■□□□□ 0.3
SHMT2-205ENST00000553474 THEMISQ8N1K5 641 aaPredicted RBP16.95■□□□□ 0.3
SHMT2-205ENST00000553474 TMEM2Q9UHN6 1383 aa16.94■□□□□ 0.3
SHMT2-205ENST00000553474 SLIT1O75093 1534 aa16.94■□□□□ 0.3
SHMT2-205ENST00000553474 EVC2Q86UK5 1308 aa16.93■□□□□ 0.3
SHMT2-205ENST00000553474 SLFN5Q08AF3 891 aa16.93■□□□□ 0.3
SHMT2-205ENST00000553474 TRAK1Q9UPV9 953 aa16.93■□□□□ 0.3
SHMT2-205ENST00000553474 NSD3Q9BZ95 1437 aa16.93■□□□□ 0.3
SHMT2-205ENST00000553474 NCBP3Q53F19 620 aaKnown RBP16.92■□□□□ 0.3
SHMT2-205ENST00000553474 NKTRP30414 1462 aaKnown RBP16.92■□□□□ 0.3
SHMT2-205ENST00000553474 ARHGAP23Q9P227 1491 aa16.92■□□□□ 0.3
SHMT2-205ENST00000553474 E9PSI1 815 aa16.92■□□□□ 0.3
SHMT2-205ENST00000553474 CGNL1Q0VF96 1302 aa16.91■□□□□ 0.3
SHMT2-205ENST00000553474 ANKRD36BQ8N2N9 1353 aa16.9■□□□□ 0.3
SHMT2-205ENST00000553474 ANP32AP39687 249 aaKnown RBP16.9■□□□□ 0.3
SHMT2-205ENST00000553474 SHPRHQ149N8 1683 aa16.9■□□□□ 0.3
SHMT2-205ENST00000553474 EID1Q9Y6B2 187 aa16.89■□□□□ 0.3
SHMT2-205ENST00000553474 TULP4Q9NRJ4 1543 aa16.89■□□□□ 0.29
SHMT2-205ENST00000553474 TXNDC2Q86VQ3 553 aa16.89■□□□□ 0.29
SHMT2-205ENST00000553474 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
SHMT2-205ENST00000553474 STRCQ7RTU9 1775 aa16.88■□□□□ 0.29
SHMT2-205ENST00000553474 LTKP29376 864 aa16.87■□□□□ 0.29
SHMT2-205ENST00000553474 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.87■□□□□ 0.29
SHMT2-205ENST00000553474 APAF1O14727 1248 aa16.87■□□□□ 0.29
SHMT2-205ENST00000553474 CRBNQ96SW2 442 aa16.87■□□□□ 0.29
SHMT2-205ENST00000553474 HDGFP51858 240 aaKnown RBP16.86■□□□□ 0.29
SHMT2-205ENST00000553474 ANKLE2Q86XL3 938 aa16.86■□□□□ 0.29
SHMT2-205ENST00000553474 NCKAP5LQ9HCH0 1330 aa16.86■□□□□ 0.29
SHMT2-205ENST00000553474 NRXN3Q9Y4C0 1643 aa16.86■□□□□ 0.29
SHMT2-205ENST00000553474 TMEM132EQ6IEE7 984 aa16.85■□□□□ 0.29
SHMT2-205ENST00000553474 CFAP53Q96M91 514 aa16.85■□□□□ 0.29
SHMT2-205ENST00000553474 SLC12A5Q9H2X9 1139 aa16.85■□□□□ 0.29
SHMT2-205ENST00000553474 PLIN1O60240 522 aa16.84■□□□□ 0.29
SHMT2-205ENST00000553474 ATAD2Q6PL18 1390 aa16.84■□□□□ 0.29
SHMT2-205ENST00000553474 CENPQQ7L2Z9 268 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-205ENST00000553474 MED14O60244 1454 aa16.83■□□□□ 0.29
SHMT2-205ENST00000553474 IPO9Q96P70 1041 aaKnown RBP16.83■□□□□ 0.28
SHMT2-205ENST00000553474 NOP58Q9Y2X3 529 aaKnown RBP16.83■□□□□ 0.28
SHMT2-205ENST00000553474 IQSEC2Q5JU85 1478 aa16.83■□□□□ 0.28
SHMT2-205ENST00000553474 ANKRD26Q9UPS8 1709 aa16.83■□□□□ 0.28
SHMT2-205ENST00000553474 PLEKHG1Q9ULL1 1385 aa16.82■□□□□ 0.28
SHMT2-205ENST00000553474 CCDC27Q2M243 656 aa16.82■□□□□ 0.28
SHMT2-205ENST00000553474 CCDC146Q8IYE0 955 aa16.82■□□□□ 0.28
SHMT2-205ENST00000553474 RUNDC1Q96C34 613 aa16.82■□□□□ 0.28
SHMT2-205ENST00000553474 SETD1AO15047 1707 aaKnown RBP16.82■□□□□ 0.28
SHMT2-205ENST00000553474 NPHP4O75161 1426 aaPredicted RBP16.82■□□□□ 0.28
SHMT2-205ENST00000553474 ABCC11Q96J66 1382 aa16.81■□□□□ 0.28
SHMT2-205ENST00000553474 KDM2BQ8NHM5 1336 aa16.81■□□□□ 0.28
SHMT2-205ENST00000553474 ALKQ9UM73 1620 aa16.81■□□□□ 0.28
SHMT2-205ENST00000553474 WWC1Q8IX03 1113 aa16.8■□□□□ 0.28
SHMT2-205ENST00000553474 PHF23Q9BUL5 403 aaPredicted RBP16.8■□□□□ 0.28
SHMT2-205ENST00000553474 AAMPQ13685 434 aa16.79■□□□□ 0.28
SHMT2-205ENST00000553474 WDR63Q8IWG1 891 aa16.79■□□□□ 0.28
SHMT2-205ENST00000553474 BACH2Q9BYV9 841 aa16.79■□□□□ 0.28
SHMT2-205ENST00000553474 YTHDC2Q9H6S0 1430 aaKnown RBP16.79■□□□□ 0.28
SHMT2-205ENST00000553474 PDE4AP27815 886 aa16.79■□□□□ 0.28
SHMT2-205ENST00000553474 PDE3AQ14432 1141 aa16.79■□□□□ 0.28
SHMT2-205ENST00000553474 SLC26A8Q96RN1 970 aa16.79■□□□□ 0.28
SHMT2-205ENST00000553474 DIP2AQ14689 1571 aa16.78■□□□□ 0.28
SHMT2-205ENST00000553474 DLC1Q96QB1 1528 aa16.78■□□□□ 0.28
SHMT2-205ENST00000553474 ADGRB2O60241 1585 aa16.77■□□□□ 0.28
SHMT2-205ENST00000553474 ADAMTS13Q76LX8 1427 aa16.77■□□□□ 0.27
SHMT2-205ENST00000553474 C20orf194Q5TEA3 1177 aa16.77■□□□□ 0.27
SHMT2-205ENST00000553474 TERF2IPQ9NYB0 399 aa16.77■□□□□ 0.27
SHMT2-205ENST00000553474 MTHFSP49914 203 aa16.76■□□□□ 0.27
SHMT2-205ENST00000553474 SPINK5Q9NQ38 1064 aaPredicted RBP16.75■□□□□ 0.27
SHMT2-205ENST00000553474 A0A1W2PP64 1363 aa16.75■□□□□ 0.27
SHMT2-205ENST00000553474 ZBTB47Q9UFB7 747 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms