RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 NUTM2FA1L443 756 aa24.43■■□□□ 1.5
XRCC3-204ENST00000553361 RXRBP28702 533 aa24.43■■□□□ 1.5
XRCC3-204ENST00000553361 SOS2Q07890 1332 aaPredicted RBP24.42■■□□□ 1.5
XRCC3-204ENST00000553361 ADAMTS2O95450 1211 aa24.42■■□□□ 1.5
XRCC3-204ENST00000553361 NHSL1Q5SYE7 1610 aa24.41■■□□□ 1.5
XRCC3-204ENST00000553361 ABCC11Q96J66 1382 aa24.41■■□□□ 1.5
XRCC3-204ENST00000553361 CFAP70Q5T0N1 1121 aa24.39■■□□□ 1.49
XRCC3-204ENST00000553361 C14orf93Q9H972 538 aaKnown RBP24.39■■□□□ 1.49
XRCC3-204ENST00000553361 PLEKHH1Q9ULM0 1364 aa24.39■■□□□ 1.49
XRCC3-204ENST00000553361 PIK3C2GO75747 1445 aa24.38■■□□□ 1.49
XRCC3-204ENST00000553361 NGLY1Q96IV0 654 aa24.38■■□□□ 1.49
XRCC3-204ENST00000553361 FOXO3O43524 673 aa24.37■■□□□ 1.49
XRCC3-204ENST00000553361 XPCQ01831 940 aaPredicted RBP24.36■■□□□ 1.49
XRCC3-204ENST00000553361 QTRT2Q9H974 415 aaKnown RBP24.36■■□□□ 1.49
XRCC3-204ENST00000553361 NPHP3Q7Z494 1330 aa24.35■■□□□ 1.49
XRCC3-204ENST00000553361 TECPR2O15040 1411 aa24.35■■□□□ 1.49
XRCC3-204ENST00000553361 YTHDC2Q9H6S0 1430 aaKnown RBP24.35■■□□□ 1.49
XRCC3-204ENST00000553361 SIRT1Q96EB6 747 aa24.32■■□□□ 1.48
XRCC3-204ENST00000553361 DHX57Q6P158 1386 aaKnown RBP24.31■■□□□ 1.48
XRCC3-204ENST00000553361 SAFB2Q14151 953 aaKnown RBP eCLIP24.31■■□□□ 1.48
XRCC3-204ENST00000553361 KDM2AQ9Y2K7 1162 aa24.3■■□□□ 1.48
XRCC3-204ENST00000553361 RBM6P78332 1123 aaKnown RBP24.29■■□□□ 1.48
XRCC3-204ENST00000553361 CDC42BPGQ6DT37 1551 aa24.29■■□□□ 1.48
XRCC3-204ENST00000553361 IFT172Q9UG01 1749 aa24.28■■□□□ 1.48
XRCC3-204ENST00000553361 UPF1Q92900 1129 aaKnown RBP eCLIP24.28■■□□□ 1.48
XRCC3-204ENST00000553361 PRAM1Q96QH2 718 aa24.28■■□□□ 1.48
XRCC3-204ENST00000553361 POGKQ9P215 609 aa24.27■■□□□ 1.48
XRCC3-204ENST00000553361 USP21Q9UK80 565 aa24.27■■□□□ 1.48
XRCC3-204ENST00000553361 LAMC1P11047 1609 aa24.26■■□□□ 1.47
XRCC3-204ENST00000553361 DCAF11Q8TEB1 546 aa24.26■■□□□ 1.47
XRCC3-204ENST00000553361 NRXN1Q9ULB1 1477 aa24.26■■□□□ 1.47
XRCC3-204ENST00000553361 HRCP23327 699 aa24.25■■□□□ 1.47
XRCC3-204ENST00000553361 MYOM2P54296 1465 aa24.25■■□□□ 1.47
XRCC3-204ENST00000553361 KRT28Q7Z3Y7 464 aa24.23■■□□□ 1.47
XRCC3-204ENST00000553361 FNBP4Q8N3X1 1017 aaPredicted RBP24.23■■□□□ 1.47
XRCC3-204ENST00000553361 PXDNQ92626 1479 aa24.22■■□□□ 1.47
XRCC3-204ENST00000553361 TRAK1Q9UPV9 953 aa24.22■■□□□ 1.47
XRCC3-204ENST00000553361 CDK12Q9NYV4 1490 aaPredicted RBP24.21■■□□□ 1.47
XRCC3-204ENST00000553361 PHF8Q9UPP1 1060 aa24.21■■□□□ 1.47
XRCC3-204ENST00000553361 TRPC5Q9UL62 973 aaPredicted RBP24.2■■□□□ 1.46
XRCC3-204ENST00000553361 KNDC1Q76NI1 1749 aa24.18■■□□□ 1.46
XRCC3-204ENST00000553361 SPATA31A3Q5VYP0 1347 aa24.18■■□□□ 1.46
XRCC3-204ENST00000553361 PLEKHG5O94827 1062 aa24.17■■□□□ 1.46
XRCC3-204ENST00000553361 HIRIP3Q9BW71 556 aaPredicted RBP24.17■■□□□ 1.46
XRCC3-204ENST00000553361 RGS12O14924 1447 aa24.17■■□□□ 1.46
XRCC3-204ENST00000553361 PSME1Q06323 249 aa24.16■■□□□ 1.46
XRCC3-204ENST00000553361 PMFBP1Q8TBY8 1022 aa24.15■■□□□ 1.46
XRCC3-204ENST00000553361 LMOD2Q6P5Q4 547 aa24.14■■□□□ 1.45
XRCC3-204ENST00000553361 STAC3Q96MF2 364 aa24.14■■□□□ 1.45
XRCC3-204ENST00000553361 MINK1Q8N4C8 1332 aaPredicted RBP24.13■■□□□ 1.45
XRCC3-204ENST00000553361 HAP1P54257 671 aaPredicted RBP24.12■■□□□ 1.45
XRCC3-204ENST00000553361 FMN2Q9NZ56 1722 aa24.12■■□□□ 1.45
XRCC3-204ENST00000553361 COL22A1Q8NFW1 1626 aaPredicted RBP24.11■■□□□ 1.45
XRCC3-204ENST00000553361 CABLES1Q8TDN4 633 aa24.11■■□□□ 1.45
XRCC3-204ENST00000553361 ATRNO75882 1429 aa24.1■■□□□ 1.45
XRCC3-204ENST00000553361 ADGRB1O14514 1584 aa24.09■■□□□ 1.45
XRCC3-204ENST00000553361 BCL9LQ86UU0 1499 aa24.09■■□□□ 1.45
XRCC3-204ENST00000553361 DLC1Q96QB1 1528 aa24.09■■□□□ 1.45
XRCC3-204ENST00000553361 WASLO00401 505 aaPredicted RBP24.07■■□□□ 1.44
XRCC3-204ENST00000553361 UNC5CLQ8IV45 518 aa24.07■■□□□ 1.44
XRCC3-204ENST00000553361 GJD4Q96KN9 370 aaPredicted RBP24.07■■□□□ 1.44
XRCC3-204ENST00000553361 TNS3Q68CZ2 1445 aa24.06■■□□□ 1.44
XRCC3-204ENST00000553361 KIF1AQ12756 1690 aa24.05■■□□□ 1.44
XRCC3-204ENST00000553361 SBNO1A3KN83 1393 aa24.05■■□□□ 1.44
XRCC3-204ENST00000553361 ANKARQ7Z5J8 1434 aa24.04■■□□□ 1.44
XRCC3-204ENST00000553361 PRR36Q9H6K5 1346 aa24.04■■□□□ 1.44
XRCC3-204ENST00000553361 NGDNQ8NEJ9 315 aaKnown RBP24.02■■□□□ 1.44
XRCC3-204ENST00000553361 ATAD2Q6PL18 1390 aa24.02■■□□□ 1.44
XRCC3-204ENST00000553361 ARHGEF10O15013 1369 aa24.01■■□□□ 1.43
XRCC3-204ENST00000553361 EIF3AQ14152 1382 aaKnown RBP24■■□□□ 1.43
XRCC3-204ENST00000553361 GPRASP1Q5JY77 1395 aa24■■□□□ 1.43
XRCC3-204ENST00000553361 RGPD8O14715 1765 aaPredicted RBP23.99■■□□□ 1.43
XRCC3-204ENST00000553361 SLIT2O94813 1529 aa23.99■■□□□ 1.43
XRCC3-204ENST00000553361 FAM83GA6ND36 823 aa23.97■■□□□ 1.43
XRCC3-204ENST00000553361 PAK3O75914 559 aaPredicted RBP23.97■■□□□ 1.43
XRCC3-204ENST00000553361 NUDT16Q96DE0 195 aaKnown RBP23.97■■□□□ 1.43
XRCC3-204ENST00000553361 CCDC9Q9Y3X0 531 aaKnown RBP23.97■■□□□ 1.43
XRCC3-204ENST00000553361 NBPF1Q3BBV0 1214 aa23.96■■□□□ 1.43
XRCC3-204ENST00000553361 ADGRB2O60241 1585 aa23.95■■□□□ 1.43
XRCC3-204ENST00000553361 CDK19Q9BWU1 502 aa23.95■■□□□ 1.42
XRCC3-204ENST00000553361 USP32Q8NFA0 1604 aa23.95■■□□□ 1.42
XRCC3-204ENST00000553361 VPS72Q15906 364 aa23.94■■□□□ 1.42
XRCC3-204ENST00000553361 RALGAPBQ86X10 1494 aa23.94■■□□□ 1.42
XRCC3-204ENST00000553361 TULP4Q9NRJ4 1543 aa23.93■■□□□ 1.42
XRCC3-204ENST00000553361 SEPT12Q8IYM1 358 aa23.91■■□□□ 1.42
XRCC3-204ENST00000553361 MARF1Q9Y4F3 1742 aaKnown RBP23.9■■□□□ 1.42
XRCC3-204ENST00000553361 BTG4Q9NY30 223 aa23.89■■□□□ 1.41
XRCC3-204ENST00000553361 CCDC61Q9Y6R9 512 aa23.87■■□□□ 1.41
XRCC3-204ENST00000553361 CCDC125Q86Z20 511 aa23.86■■□□□ 1.41
XRCC3-204ENST00000553361 L3MBTL2Q969R5 705 aa23.86■■□□□ 1.41
XRCC3-204ENST00000553361 SIN3AQ96ST3 1273 aa23.86■■□□□ 1.41
XRCC3-204ENST00000553361 EP400Q96L91 3159 aa23.85■■□□□ 1.41
XRCC3-204ENST00000553361 NUTM2GQ5VZR2 741 aa23.85■■□□□ 1.41
XRCC3-204ENST00000553361 GLI3P10071 1580 aa23.85■■□□□ 1.41
XRCC3-204ENST00000553361 ACEP12821 1306 aa23.84■■□□□ 1.41
XRCC3-204ENST00000553361 ATP7BP35670 1465 aa23.84■■□□□ 1.41
XRCC3-204ENST00000553361 A0A0G2JS52 829 aa23.84■■□□□ 1.41
XRCC3-204ENST00000553361 ONECUT3O60422 494 aaPredicted RBP23.84■■□□□ 1.41
XRCC3-204ENST00000553361 MYT1Q01538 1121 aa23.84■■□□□ 1.41
XRCC3-204ENST00000553361 NEUROD1Q13562 356 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms