RNA–Protein interactions for RNA: ENST00000553317.1

CCDC175-203, Transcript of coiled-coil domain containing 175, humanhuman

TSL 3

Gene CCDC175, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-203ENST00000553317 PRDM9Q9NQV7 894 aa12.35□□□□□ -0.43
CCDC175-203ENST00000553317 CD46P15529 392 aa12.34□□□□□ -0.43
CCDC175-203ENST00000553317 RNF19BQ6ZMZ0 732 aa12.34□□□□□ -0.43
CCDC175-203ENST00000553317 ST8SIA5O15466 376 aa12.33□□□□□ -0.44
CCDC175-203ENST00000553317 FOXC1Q12948 553 aa12.33□□□□□ -0.44
CCDC175-203ENST00000553317 CCDC102AQ96A19 550 aa12.33□□□□□ -0.44
CCDC175-203ENST00000553317 MMP16P51512 607 aa12.32□□□□□ -0.44
CCDC175-203ENST00000553317 BARGINQ6ZT62 677 aa12.32□□□□□ -0.44
CCDC175-203ENST00000553317 ZMYND10O75800 440 aa12.31□□□□□ -0.44
CCDC175-203ENST00000553317 GRIPAP1Q4V328 841 aa12.31□□□□□ -0.44
CCDC175-203ENST00000553317 LCE2AQ5TA79 106 aaPredicted RBP12.3□□□□□ -0.44
CCDC175-203ENST00000553317 SMCPP49901 116 aaPredicted RBP12.29□□□□□ -0.44
CCDC175-203ENST00000553317 Q3C1V9 767 aa12.29□□□□□ -0.44
CCDC175-203ENST00000553317 MDM2Q00987 491 aaPredicted RBP12.27□□□□□ -0.45
CCDC175-203ENST00000553317 WNT7AO00755 349 aa12.26□□□□□ -0.45
CCDC175-203ENST00000553317 CTC1Q2NKJ3 1217 aa12.26□□□□□ -0.45
CCDC175-203ENST00000553317 DXOO77932 396 aaKnown RBP12.25□□□□□ -0.45
CCDC175-203ENST00000553317 CYP4X1Q8N118 509 aa12.25□□□□□ -0.45
CCDC175-203ENST00000553317 DACH1Q9UI36 760 aa12.25□□□□□ -0.45
CCDC175-203ENST00000553317 KDM4AO75164 1064 aa12.24□□□□□ -0.45
CCDC175-203ENST00000553317 USP46P62068 366 aa12.23□□□□□ -0.45
CCDC175-203ENST00000553317 ZBTB24O43167 697 aaPredicted RBP12.22□□□□□ -0.45
CCDC175-203ENST00000553317 CLCN1P35523 988 aa12.22□□□□□ -0.45
CCDC175-203ENST00000553317 TRIM32Q13049 653 aa12.22□□□□□ -0.45
CCDC175-203ENST00000553317 USB1Q9BQ65 265 aaKnown RBP12.22□□□□□ -0.45
CCDC175-203ENST00000553317 TREML4Q6UXN2 200 aa12.21□□□□□ -0.45
CCDC175-203ENST00000553317 GPCPD1Q9NPB8 672 aa12.21□□□□□ -0.45
CCDC175-203ENST00000553317 AXIN1O15169 862 aa12.2□□□□□ -0.46
CCDC175-203ENST00000553317 SMPD1P17405 629 aa12.19□□□□□ -0.46
CCDC175-203ENST00000553317 HOXA2O43364 376 aa12.18□□□□□ -0.46
CCDC175-203ENST00000553317 TTLL12Q14166 644 aaPredicted RBP12.18□□□□□ -0.46
CCDC175-203ENST00000553317 SNIP1Q8TAD8 396 aaKnown RBP12.18□□□□□ -0.46
CCDC175-203ENST00000553317 AK7Q96M32 723 aa12.18□□□□□ -0.46
CCDC175-203ENST00000553317 HLA-CQ95604 372 aa12.17□□□□□ -0.46
CCDC175-203ENST00000553317 GMPR2Q9P2T1 348 aaKnown RBP12.16□□□□□ -0.46
CCDC175-203ENST00000553317 MRGPRX2Q96LB1 330 aa12.15□□□□□ -0.46
CCDC175-203ENST00000553317 TTC24A2A3L6 582 aaPredicted RBP12.14□□□□□ -0.47
CCDC175-203ENST00000553317 SLC24A3Q9HC58 644 aa12.14□□□□□ -0.47
CCDC175-203ENST00000553317 FAM217BQ9NTX9 383 aaPredicted RBP12.14□□□□□ -0.47
CCDC175-203ENST00000553317 TRIM66O15016 1216 aa12.12□□□□□ -0.47
CCDC175-203ENST00000553317 WNT7BP56706 349 aa12.12□□□□□ -0.47
CCDC175-203ENST00000553317 AMHR2Q16671 573 aa12.12□□□□□ -0.47
CCDC175-203ENST00000553317 REPIN1Q9BWE0 567 aaKnown RBP12.12□□□□□ -0.47
CCDC175-203ENST00000553317 SSTR3P32745 418 aaPredicted RBP12.11□□□□□ -0.47
CCDC175-203ENST00000553317 SKOR1P84550 965 aa12.11□□□□□ -0.47
CCDC175-203ENST00000553317 C11orf95C9JLR9 678 aaPredicted RBP12.09□□□□□ -0.47
CCDC175-203ENST00000553317 J3QL48 77 aa12.09□□□□□ -0.47
CCDC175-203ENST00000553317 JUNDP17535 347 aa12.09□□□□□ -0.47
CCDC175-203ENST00000553317 NUTM1Q86Y26 1132 aa12.09□□□□□ -0.47
CCDC175-203ENST00000553317 GUCA2AQ02747 115 aa12.08□□□□□ -0.48
CCDC175-203ENST00000553317 NFX1Q12986 1120 aaKnown RBP12.07□□□□□ -0.48
CCDC175-203ENST00000553317 RC3H1Q5TC82 1133 aaKnown RBP12.07□□□□□ -0.48
CCDC175-203ENST00000553317 GIGYF2Q6Y7W6 1299 aaKnown RBP12.07□□□□□ -0.48
CCDC175-203ENST00000553317 ATP13A2Q9NQ11 1180 aa12.07□□□□□ -0.48
CCDC175-203ENST00000553317 RETREG3Q86VR2 466 aa12.05□□□□□ -0.48
CCDC175-203ENST00000553317 PDE4DQ08499 809 aa12.04□□□□□ -0.48
CCDC175-203ENST00000553317 SYMPKQ92797 1274 aaKnown RBP12.04□□□□□ -0.48
CCDC175-203ENST00000553317 HPS1Q92902 700 aa12.04□□□□□ -0.48
CCDC175-203ENST00000553317 WFS1O76024 890 aa12.03□□□□□ -0.48
CCDC175-203ENST00000553317 CCDC24Q8N4L8 307 aa12.03□□□□□ -0.48
CCDC175-203ENST00000553317 TRIM47Q96LD4 638 aa12.03□□□□□ -0.48
CCDC175-203ENST00000553317 PCDHGC3Q9UN70 934 aa12.03□□□□□ -0.48
CCDC175-203ENST00000553317 SIAH2O43255 324 aa12.02□□□□□ -0.49
CCDC175-203ENST00000553317 PARP9Q8IXQ6 854 aa12.02□□□□□ -0.49
CCDC175-203ENST00000553317 WIPF1O43516 503 aa12.01□□□□□ -0.49
CCDC175-203ENST00000553317 PTCRAQ6ISU1 281 aaPredicted RBP12.01□□□□□ -0.49
CCDC175-203ENST00000553317 SNRPBP14678 240 aaKnown RBP12□□□□□ -0.49
CCDC175-203ENST00000553317 NUDT12Q9BQG2 462 aa12□□□□□ -0.49
CCDC175-203ENST00000553317 BEGAINQ9BUH8 593 aa12□□□□□ -0.49
CCDC175-203ENST00000553317 SENP2Q9HC62 589 aa12□□□□□ -0.49
CCDC175-203ENST00000553317 LCE2CQ5TA81 110 aa11.99□□□□□ -0.49
CCDC175-203ENST00000553317 FDX1P10109 184 aa11.98□□□□□ -0.49
CCDC175-203ENST00000553317 SPIRE2Q8WWL2 714 aa11.96□□□□□ -0.49
CCDC175-203ENST00000553317 DIXDC1Q155Q3 683 aa11.95□□□□□ -0.5
CCDC175-203ENST00000553317 KIFC2Q96AC6 838 aa11.95□□□□□ -0.5
CCDC175-203ENST00000553317 MS4A1P11836 297 aa11.94□□□□□ -0.5
CCDC175-203ENST00000553317 PTPRNQ16849 979 aa11.94□□□□□ -0.5
CCDC175-203ENST00000553317 TERTO14746 1132 aaKnown RBP11.93□□□□□ -0.5
CCDC175-203ENST00000553317 CCNYL3P0C7X3 344 aa11.93□□□□□ -0.5
CCDC175-203ENST00000553317 ALDH1A1P00352 501 aa11.92□□□□□ -0.5
CCDC175-203ENST00000553317 SH3BP2P78314 561 aa11.92□□□□□ -0.5
CCDC175-203ENST00000553317 DESI1Q6ICB0 168 aa11.92□□□□□ -0.5
CCDC175-203ENST00000553317 EVA1BQ9NVM1 165 aa11.92□□□□□ -0.5
CCDC175-203ENST00000553317 MOXD2PA6NHM9 499 aa11.9□□□□□ -0.5
CCDC175-203ENST00000553317 C6orf229H3BNL8 230 aa11.9□□□□□ -0.5
CCDC175-203ENST00000553317 NDUFV2P19404 249 aa11.9□□□□□ -0.5
CCDC175-203ENST00000553317 GJA5P36382 358 aa11.9□□□□□ -0.5
CCDC175-203ENST00000553317 EHBP1Q8NDI1 1231 aa11.9□□□□□ -0.5
CCDC175-203ENST00000553317 TBC1D2Q9BYX2 928 aa11.9□□□□□ -0.5
CCDC175-203ENST00000553317 SPDYE5A6NIY4 337 aa11.88□□□□□ -0.51
CCDC175-203ENST00000553317 MPNDQ8N594 471 aa11.88□□□□□ -0.51
CCDC175-203ENST00000553317 TRIM46Q7Z4K8 759 aa11.87□□□□□ -0.51
CCDC175-203ENST00000553317 UNC93B1Q9H1C4 597 aa11.87□□□□□ -0.51
CCDC175-203ENST00000553317 STK17AQ9UEE5 414 aa11.87□□□□□ -0.51
CCDC175-203ENST00000553317 KCNH2Q12809 1159 aa11.86□□□□□ -0.51
CCDC175-203ENST00000553317 TPRNQ4KMQ1 711 aa11.86□□□□□ -0.51
CCDC175-203ENST00000553317 PRR7Q8TB68 274 aa11.85□□□□□ -0.51
CCDC175-203ENST00000553317 INSM1Q01101 510 aaPredicted RBP11.84□□□□□ -0.51
CCDC175-203ENST00000553317 MTMR2Q13614 643 aa11.84□□□□□ -0.51
CCDC175-203ENST00000553317 GPBP1L1Q9HC44 474 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms