RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 PCDHGC3Q9UN70 934 aa11.01□□□□□ -0.65
ATXN3-218ENST00000553309 USB1Q9BQ65 265 aaKnown RBP11□□□□□ -0.65
ATXN3-218ENST00000553309 NEUROD2Q15784 382 aa10.99□□□□□ -0.65
ATXN3-218ENST00000553309 FAM117AQ9C073 453 aa10.99□□□□□ -0.65
ATXN3-218ENST00000553309 C6orf229H3BNL8 230 aa10.98□□□□□ -0.65
ATXN3-218ENST00000553309 RIC3Q7Z5B4 369 aa10.98□□□□□ -0.65
ATXN3-218ENST00000553309 SPTLC1O15269 473 aa10.97□□□□□ -0.65
ATXN3-218ENST00000553309 RSBN1LQ6PCB5 846 aaPredicted RBP10.97□□□□□ -0.65
ATXN3-218ENST00000553309 PRKD2Q9BZL6 878 aa10.97□□□□□ -0.65
ATXN3-218ENST00000553309 GJA5P36382 358 aa10.96□□□□□ -0.65
ATXN3-218ENST00000553309 MSS51Q4VC12 460 aa10.96□□□□□ -0.65
ATXN3-218ENST00000553309 MYSM1Q5VVJ2 828 aa10.96□□□□□ -0.65
ATXN3-218ENST00000553309 ANKLE1Q8NAG6 615 aa10.96□□□□□ -0.65
ATXN3-218ENST00000553309 RSPH6AQ9H0K4 717 aa10.96□□□□□ -0.65
ATXN3-218ENST00000553309 PRDM9Q9NQV7 894 aa10.96□□□□□ -0.65
ATXN3-218ENST00000553309 PCDHB15Q9Y5E8 787 aa10.96□□□□□ -0.65
ATXN3-218ENST00000553309 RETREG3Q86VR2 466 aa10.94□□□□□ -0.66
ATXN3-218ENST00000553309 DDRGK1Q96HY6 314 aa10.94□□□□□ -0.66
ATXN3-218ENST00000553309 POLR3EQ9NVU0 708 aa10.94□□□□□ -0.66
ATXN3-218ENST00000553309 SLC19A1P41440 591 aa10.92□□□□□ -0.66
ATXN3-218ENST00000553309 BRPF1P55201 1214 aaPredicted RBP10.92□□□□□ -0.66
ATXN3-218ENST00000553309 MTMR2Q13614 643 aa10.92□□□□□ -0.66
ATXN3-218ENST00000553309 CSPP1Q1MSJ5 1256 aa10.92□□□□□ -0.66
ATXN3-218ENST00000553309 LIMD1Q9UGP4 676 aa10.92□□□□□ -0.66
ATXN3-218ENST00000553309 V9GY48 417 aaPredicted RBP10.92□□□□□ -0.66
ATXN3-218ENST00000553309 PLEKHG3A1L390 1219 aa10.91□□□□□ -0.66
ATXN3-218ENST00000553309 MMP16P51512 607 aa10.91□□□□□ -0.66
ATXN3-218ENST00000553309 FCF1Q9Y324 198 aaKnown RBP10.91□□□□□ -0.66
ATXN3-218ENST00000553309 SPDYE5A6NIY4 337 aa10.9□□□□□ -0.66
ATXN3-218ENST00000553309 IL27Q8NEV9 243 aa10.9□□□□□ -0.66
ATXN3-218ENST00000553309 DXOO77932 396 aaKnown RBP10.89□□□□□ -0.67
ATXN3-218ENST00000553309 HRCP23327 699 aa10.89□□□□□ -0.67
ATXN3-218ENST00000553309 PLA2G2CQ5R387 149 aa10.89□□□□□ -0.67
ATXN3-218ENST00000553309 LIAT1Q6ZQX7 453 aa10.89□□□□□ -0.67
ATXN3-218ENST00000553309 EMID1Q96A84 441 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-218ENST00000553309 JUNDP17535 347 aa10.88□□□□□ -0.67
ATXN3-218ENST00000553309 SKIV2LQ15477 1246 aaKnown RBP10.88□□□□□ -0.67
ATXN3-218ENST00000553309 PRR7Q8TB68 274 aa10.88□□□□□ -0.67
ATXN3-218ENST00000553309 CABLES1Q8TDN4 633 aa10.88□□□□□ -0.67
ATXN3-218ENST00000553309 ZBTB3Q9H5J0 574 aa10.88□□□□□ -0.67
ATXN3-218ENST00000553309 ATP1B4Q9UN42 357 aaPredicted RBP10.88□□□□□ -0.67
ATXN3-218ENST00000553309 NUTM2BA6NNL0 878 aaPredicted RBP10.87□□□□□ -0.67
ATXN3-218ENST00000553309 NUTM2EB1AL46 878 aaPredicted RBP10.87□□□□□ -0.67
ATXN3-218ENST00000553309 CLK2P49760 499 aaKnown RBP10.87□□□□□ -0.67
ATXN3-218ENST00000553309 TUSC1Q2TAM9 212 aa10.87□□□□□ -0.67
ATXN3-218ENST00000553309 NUTM2DQ5VT03 806 aaPredicted RBP10.87□□□□□ -0.67
ATXN3-218ENST00000553309 PRPF38BQ5VTL8 546 aaKnown RBP10.87□□□□□ -0.67
ATXN3-218ENST00000553309 NUTM2AQ8IVF1 878 aaPredicted RBP10.87□□□□□ -0.67
ATXN3-218ENST00000553309 QPCTQ16769 361 aa10.86□□□□□ -0.67
ATXN3-218ENST00000553309 CCDC24Q8N4L8 307 aa10.86□□□□□ -0.67
ATXN3-218ENST00000553309 SH3D19Q5HYK7 790 aa10.85□□□□□ -0.67
ATXN3-218ENST00000553309 LILRB3O75022 631 aa10.84□□□□□ -0.67
ATXN3-218ENST00000553309 SPRYD7Q5W111 196 aa10.84□□□□□ -0.67
ATXN3-218ENST00000553309 PROCA1Q8NCQ7 364 aaPredicted RBP10.84□□□□□ -0.67
ATXN3-218ENST00000553309 ZBTB24O43167 697 aaPredicted RBP10.83□□□□□ -0.68
ATXN3-218ENST00000553309 CFAP99D6REC4 459 aa10.82□□□□□ -0.68
ATXN3-218ENST00000553309 CD2BP2O95400 341 aaKnown RBP10.82□□□□□ -0.68
ATXN3-218ENST00000553309 RPIAP49247 311 aa10.82□□□□□ -0.68
ATXN3-218ENST00000553309 RTL5Q5HYW3 569 aaPredicted RBP10.82□□□□□ -0.68
ATXN3-218ENST00000553309 DESI1Q6ICB0 168 aa10.81□□□□□ -0.68
ATXN3-218ENST00000553309 ZNF598Q86UK7 904 aaKnown RBP10.81□□□□□ -0.68
ATXN3-218ENST00000553309 NUDT12Q9BQG2 462 aa10.81□□□□□ -0.68
ATXN3-218ENST00000553309 IRX2Q9BZI1 471 aaPredicted RBP10.81□□□□□ -0.68
ATXN3-218ENST00000553309 TSC1Q92574 1164 aa10.79□□□□□ -0.68
ATXN3-218ENST00000553309 PTPRNQ16849 979 aa10.78□□□□□ -0.68
ATXN3-218ENST00000553309 ZNF697Q5TEC3 545 aa10.78□□□□□ -0.68
ATXN3-218ENST00000553309 LYPD8Q6UX82 237 aa10.78□□□□□ -0.68
ATXN3-218ENST00000553309 CCNYL3P0C7X3 344 aa10.77□□□□□ -0.69
ATXN3-218ENST00000553309 PTCRAQ6ISU1 281 aaPredicted RBP10.77□□□□□ -0.69
ATXN3-218ENST00000553309 PCMTD1Q96MG8 357 aaPredicted RBP10.77□□□□□ -0.69
ATXN3-218ENST00000553309 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.77□□□□□ -0.69
ATXN3-218ENST00000553309 GOPCQ9HD26 462 aa10.77□□□□□ -0.69
ATXN3-218ENST00000553309 EVA1BQ9NVM1 165 aa10.77□□□□□ -0.69
ATXN3-218ENST00000553309 GFRA3O60609 400 aa10.76□□□□□ -0.69
ATXN3-218ENST00000553309 FBXO31Q5XUX0 539 aaPredicted RBP10.75□□□□□ -0.69
ATXN3-218ENST00000553309 PDZRN3Q9UPQ7 1066 aa10.75□□□□□ -0.69
ATXN3-218ENST00000553309 KCNH2Q12809 1159 aa10.74□□□□□ -0.69
ATXN3-218ENST00000553309 TRIM32Q13049 653 aa10.74□□□□□ -0.69
ATXN3-218ENST00000553309 PER1O15534 1290 aaPredicted RBP10.73□□□□□ -0.69
ATXN3-218ENST00000553309 FOXC1Q12948 553 aa10.73□□□□□ -0.69
ATXN3-218ENST00000553309 PPP2R2DQ66LE6 453 aa10.73□□□□□ -0.69
ATXN3-218ENST00000553309 HELBQ8NG08 1087 aaPredicted RBP10.73□□□□□ -0.69
ATXN3-218ENST00000553309 CTHP32929 405 aa10.72□□□□□ -0.69
ATXN3-218ENST00000553309 TRIM67Q6ZTA4 783 aa10.72□□□□□ -0.69
ATXN3-218ENST00000553309 CTDSPL2Q05D32 466 aa10.71□□□□□ -0.69
ATXN3-218ENST00000553309 LAPTM4AQ15012 233 aa10.71□□□□□ -0.69
ATXN3-218ENST00000553309 GDF9O60383 454 aa10.7□□□□□ -0.7
ATXN3-218ENST00000553309 PKD2L1Q9P0L9 805 aa10.7□□□□□ -0.7
ATXN3-218ENST00000553309 TNFRSF10AO00220 468 aa10.69□□□□□ -0.7
ATXN3-218ENST00000553309 UNC93B1Q9H1C4 597 aa10.69□□□□□ -0.7
ATXN3-218ENST00000553309 NRG2O14511 850 aaPredicted RBP10.68□□□□□ -0.7
ATXN3-218ENST00000553309 AP1G2O75843 785 aa10.68□□□□□ -0.7
ATXN3-218ENST00000553309 PRR20EP86478 221 aa10.68□□□□□ -0.7
ATXN3-218ENST00000553309 PRR20CP86479 221 aa10.68□□□□□ -0.7
ATXN3-218ENST00000553309 PRR20DP86480 221 aa10.68□□□□□ -0.7
ATXN3-218ENST00000553309 PRR20BP86481 221 aa10.68□□□□□ -0.7
ATXN3-218ENST00000553309 PRR20AP86496 221 aa10.68□□□□□ -0.7
ATXN3-218ENST00000553309 SKOR1P84550 965 aa10.67□□□□□ -0.7
ATXN3-218ENST00000553309 BAP1Q92560 729 aa10.67□□□□□ -0.7
ATXN3-218ENST00000553309 MAP10Q9P2G4 905 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms