RNA–Protein interactions for RNA: ENST00000553189.5

TMTC1-209, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 2

Gene TMTC1, Length 5,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-209ENST00000553189 TMOD3Q9NYL9 352 aa9.1□□□□□ -0.95
TMTC1-209ENST00000553189 ZNF644Q9H582 1327 aaPredicted RBP9.1□□□□□ -0.95
TMTC1-209ENST00000553189 CASKIN1Q8WXD9 1431 aa9.1□□□□□ -0.95
TMTC1-209ENST00000553189 FGD1P98174 961 aa9.1□□□□□ -0.95
TMTC1-209ENST00000553189 RSPH6AQ9H0K4 717 aa9.1□□□□□ -0.95
TMTC1-209ENST00000553189 SLAIN2Q9P270 581 aa9.1□□□□□ -0.95
TMTC1-209ENST00000553189 ZMYM3Q14202 1370 aa9.1□□□□□ -0.95
TMTC1-209ENST00000553189 TMOD2Q9NZR1 351 aa9.09□□□□□ -0.95
TMTC1-209ENST00000553189 UNC13AQ9UPW8 1703 aa9.09□□□□□ -0.95
TMTC1-209ENST00000553189 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.09□□□□□ -0.95
TMTC1-209ENST00000553189 CDK19Q9BWU1 502 aa9.09□□□□□ -0.95
TMTC1-209ENST00000553189 TOP2BQ02880 1626 aa9.09□□□□□ -0.95
TMTC1-209ENST00000553189 KIF14Q15058 1648 aa9.08□□□□□ -0.96
TMTC1-209ENST00000553189 TMEM132EQ6IEE7 984 aa9.08□□□□□ -0.96
TMTC1-209ENST00000553189 CABP2Q9NPB3 220 aa9.08□□□□□ -0.96
TMTC1-209ENST00000553189 TSHZ2Q9NRE2 1034 aa9.08□□□□□ -0.96
TMTC1-209ENST00000553189 EIF4G3O43432 1585 aaKnown RBP9.08□□□□□ -0.96
TMTC1-209ENST00000553189 STARD3NLO95772 234 aa9.08□□□□□ -0.96
TMTC1-209ENST00000553189 NF2P35240 595 aa9.08□□□□□ -0.96
TMTC1-209ENST00000553189 RFC4P35249 363 aa9.08□□□□□ -0.96
TMTC1-209ENST00000553189 WWC1Q8IX03 1113 aa9.08□□□□□ -0.96
TMTC1-209ENST00000553189 PARP3Q9Y6F1 533 aa9.08□□□□□ -0.96
TMTC1-209ENST00000553189 GOLGA6L3A6NEY3 463 aa9.08□□□□□ -0.96
TMTC1-209ENST00000553189 FRAT1Q92837 279 aaPredicted RBP9.08□□□□□ -0.96
TMTC1-209ENST00000553189 MCCP23508 829 aa9.07□□□□□ -0.96
TMTC1-209ENST00000553189 TCERG1O14776 1098 aaKnown RBP9.07□□□□□ -0.96
TMTC1-209ENST00000553189 KIF21AQ7Z4S6 1674 aa9.07□□□□□ -0.96
TMTC1-209ENST00000553189 ANKRD30BQ9BXX2 1392 aa9.07□□□□□ -0.96
TMTC1-209ENST00000553189 A0A087WZG4 1122 aa9.07□□□□□ -0.96
TMTC1-209ENST00000553189 HSP90AA2PQ14568 343 aaPredicted RBP9.06□□□□□ -0.96
TMTC1-209ENST00000553189 KANK4Q5T7N3 995 aaPredicted RBP9.06□□□□□ -0.96
TMTC1-209ENST00000553189 ABCC10Q5T3U5 1492 aa9.06□□□□□ -0.96
TMTC1-209ENST00000553189 DHX29Q7Z478 1369 aaKnown RBP9.06□□□□□ -0.96
TMTC1-209ENST00000553189 TCEAL9Q9UHQ7 104 aa9.06□□□□□ -0.96
TMTC1-209ENST00000553189 CCDC141Q6ZP82 1450 aa9.06□□□□□ -0.96
TMTC1-209ENST00000553189 FAM177BA6PVY3 158 aa9.06□□□□□ -0.96
TMTC1-209ENST00000553189 PEG3Q9GZU2 1588 aa9.06□□□□□ -0.96
TMTC1-209ENST00000553189 IPO9Q96P70 1041 aaKnown RBP9.06□□□□□ -0.96
TMTC1-209ENST00000553189 SENP3-EIF4A1A0A087X0R7 540 aa9.05□□□□□ -0.96
TMTC1-209ENST00000553189 RPRD2Q5VT52 1461 aaKnown RBP9.05□□□□□ -0.96
TMTC1-209ENST00000553189 CNKSR2Q8WXI2 1034 aa9.05□□□□□ -0.96
TMTC1-209ENST00000553189 ZNF622Q969S3 477 aaKnown RBP eCLIP9.05□□□□□ -0.96
TMTC1-209ENST00000553189 SYAP1Q96A49 352 aaPredicted RBP9.05□□□□□ -0.96
TMTC1-209ENST00000553189 BCL2L13Q9BXK5 485 aa9.05□□□□□ -0.96
TMTC1-209ENST00000553189 KIF21BO75037 1637 aa9.05□□□□□ -0.96
TMTC1-209ENST00000553189 YEATS2Q9ULM3 1422 aa9.05□□□□□ -0.96
TMTC1-209ENST00000553189 NEO1Q92859 1461 aa9.04□□□□□ -0.96
TMTC1-209ENST00000553189 GPATCH3Q96I76 525 aa9.04□□□□□ -0.96
TMTC1-209ENST00000553189 RBM6P78332 1123 aaKnown RBP9.04□□□□□ -0.96
TMTC1-209ENST00000553189 ST5P78524 1137 aa9.04□□□□□ -0.96
TMTC1-209ENST00000553189 FLAD1Q8NFF5 587 aa9.04□□□□□ -0.96
TMTC1-209ENST00000553189 PLCH2O75038 1416 aa9.04□□□□□ -0.96
TMTC1-209ENST00000553189 BICDL1Q6ZP65 573 aa9.04□□□□□ -0.96
TMTC1-209ENST00000553189 CCDC61Q9Y6R9 512 aa9.04□□□□□ -0.96
TMTC1-209ENST00000553189 IPO8O15397 1037 aaKnown RBP9.04□□□□□ -0.96
TMTC1-209ENST00000553189 SPRYD3Q8NCJ5 442 aa9.04□□□□□ -0.96
TMTC1-209ENST00000553189 GAS2L2Q8NHY3 880 aa9.04□□□□□ -0.96
TMTC1-209ENST00000553189 JDP2Q8WYK2 163 aa9.04□□□□□ -0.96
TMTC1-209ENST00000553189 ARID3AQ99856 593 aa9.04□□□□□ -0.96
TMTC1-209ENST00000553189 TRAPPC8Q9Y2L5 1435 aa9.04□□□□□ -0.96
TMTC1-209ENST00000553189 RAD21O60216 631 aa9.03□□□□□ -0.96
TMTC1-209ENST00000553189 RBM5P52756 815 aaKnown RBP eCLIP9.03□□□□□ -0.96
TMTC1-209ENST00000553189 RPGRQ92834 1020 aaKnown RBP9.03□□□□□ -0.96
TMTC1-209ENST00000553189 DPY19L2Q6NUT2 758 aa9.03□□□□□ -0.96
TMTC1-209ENST00000553189 TIMELESSQ9UNS1 1208 aa9.03□□□□□ -0.96
TMTC1-209ENST00000553189 IDI1Q13907 227 aa9.03□□□□□ -0.96
TMTC1-209ENST00000553189 LRRFIP1Q32MZ4 808 aaKnown RBP9.03□□□□□ -0.96
TMTC1-209ENST00000553189 A2MP01023 1474 aa9.03□□□□□ -0.96
TMTC1-209ENST00000553189 WDR97A6NE52 1622 aa9.03□□□□□ -0.96
TMTC1-209ENST00000553189 EIF2S2P20042 333 aaKnown RBP9.03□□□□□ -0.96
TMTC1-209ENST00000553189 PHF14O94880 888 aa9.02□□□□□ -0.97
TMTC1-209ENST00000553189 ARHGEF6Q15052 776 aa9.02□□□□□ -0.97
TMTC1-209ENST00000553189 ERBINQ96RT1 1412 aa9.02□□□□□ -0.97
TMTC1-209ENST00000553189 GZF1Q9H116 711 aaPredicted RBP9.02□□□□□ -0.97
TMTC1-209ENST00000553189 PODXL2Q9NZ53 605 aa9.02□□□□□ -0.97
TMTC1-209ENST00000553189 ST20-MTHFSA0A0A6YYL1 179 aa9.02□□□□□ -0.97
TMTC1-209ENST00000553189 MTHFSP49914 203 aa9.02□□□□□ -0.97
TMTC1-209ENST00000553189 ZNF530Q6P9A1 599 aaPredicted RBP9.02□□□□□ -0.97
TMTC1-209ENST00000553189 NUDT16Q96DE0 195 aaKnown RBP9.02□□□□□ -0.97
TMTC1-209ENST00000553189 KTN1Q86UP2 1357 aaKnown RBP9.02□□□□□ -0.97
TMTC1-209ENST00000553189 FAM196AQ6ZSG2 479 aa9.01□□□□□ -0.97
TMTC1-209ENST00000553189 TBX22Q9Y458 520 aa9.01□□□□□ -0.97
TMTC1-209ENST00000553189 DIAPH1O60610 1272 aaKnown RBP9.01□□□□□ -0.97
TMTC1-209ENST00000553189 NAP1L2Q9ULW6 460 aaPredicted RBP9.01□□□□□ -0.97
TMTC1-209ENST00000553189 HFM1A2PYH4 1435 aa9.01□□□□□ -0.97
TMTC1-209ENST00000553189 ZFYVE16Q7Z3T8 1539 aa9.01□□□□□ -0.97
TMTC1-209ENST00000553189 VSIG10Q8N0Z9 540 aa9.01□□□□□ -0.97
TMTC1-209ENST00000553189 GOLGA6L1Q8N7Z2 621 aa9.01□□□□□ -0.97
TMTC1-209ENST00000553189 ZNF219Q9P2Y4 722 aaPredicted RBP9.01□□□□□ -0.97
TMTC1-209ENST00000553189 RAB3GAP2Q9H2M9 1393 aa9.01□□□□□ -0.97
TMTC1-209ENST00000553189 VPS53Q5VIR6 699 aa9□□□□□ -0.97
TMTC1-209ENST00000553189 CCDC87Q9NVE4 849 aa9□□□□□ -0.97
TMTC1-209ENST00000553189 NUP160Q12769 1436 aa9□□□□□ -0.97
TMTC1-209ENST00000553189 KRT27Q7Z3Y8 459 aa9□□□□□ -0.97
TMTC1-209ENST00000553189 EHBP1L1Q8N3D4 1523 aa9□□□□□ -0.97
TMTC1-209ENST00000553189 HTATSF1O43719 755 aaKnown RBP9□□□□□ -0.97
TMTC1-209ENST00000553189 MPRIPQ6WCQ1 1025 aa9□□□□□ -0.97
TMTC1-209ENST00000553189 PNISRQ8TF01 805 aaKnown RBP9□□□□□ -0.97
TMTC1-209ENST00000553189 RIC3Q7Z5B4 369 aa9□□□□□ -0.97
TMTC1-209ENST00000553189 SLKQ9H2G2 1235 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms