RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 PPM1GO15355 546 aaPredicted RBP9.68□□□□□ -0.86
BEST3-212ENST00000553096 INSRP06213 1382 aa9.68□□□□□ -0.86
BEST3-212ENST00000553096 TMF1P82094 1093 aa9.67□□□□□ -0.86
BEST3-212ENST00000553096 CFAP70Q5T0N1 1121 aa9.67□□□□□ -0.86
BEST3-212ENST00000553096 GGT6Q6P531 493 aa9.67□□□□□ -0.86
BEST3-212ENST00000553096 PANK3Q9H999 370 aa9.67□□□□□ -0.86
BEST3-212ENST00000553096 TMEM131LA2VDJ0 1609 aa9.67□□□□□ -0.86
BEST3-212ENST00000553096 DDRGK1Q96HY6 314 aa9.66□□□□□ -0.86
BEST3-212ENST00000553096 STAC3Q96MF2 364 aa9.66□□□□□ -0.86
BEST3-212ENST00000553096 RCAN3Q9UKA8 241 aa9.66□□□□□ -0.86
BEST3-212ENST00000553096 CLTCQ00610 1675 aaKnown RBP9.66□□□□□ -0.86
BEST3-212ENST00000553096 BRD2P25440 801 aaKnown RBP9.65□□□□□ -0.86
BEST3-212ENST00000553096 MLECQ14165 292 aa9.65□□□□□ -0.86
BEST3-212ENST00000553096 ASXL1Q8IXJ9 1541 aa9.65□□□□□ -0.87
BEST3-212ENST00000553096 GLIPR1L2Q4G1C9 344 aa9.65□□□□□ -0.87
BEST3-212ENST00000553096 ARHGAP31Q2M1Z3 1444 aa9.65□□□□□ -0.87
BEST3-212ENST00000553096 REREQ9P2R6 1566 aa9.64□□□□□ -0.87
BEST3-212ENST00000553096 PDE4AP27815 886 aa9.64□□□□□ -0.87
BEST3-212ENST00000553096 CC2D1BQ5T0F9 858 aaKnown RBP9.64□□□□□ -0.87
BEST3-212ENST00000553096 C14orf37Q86TY3 774 aa9.64□□□□□ -0.87
BEST3-212ENST00000553096 WASHC2CQ9Y4E1 1318 aa9.64□□□□□ -0.87
BEST3-212ENST00000553096 NLRP13Q86W25 1043 aa9.64□□□□□ -0.87
BEST3-212ENST00000553096 BACH2Q9BYV9 841 aa9.64□□□□□ -0.87
BEST3-212ENST00000553096 EIF3AQ14152 1382 aaKnown RBP9.64□□□□□ -0.87
BEST3-212ENST00000553096 BLMP54132 1417 aaPredicted RBP9.63□□□□□ -0.87
BEST3-212ENST00000553096 EXOC6Q8TAG9 804 aa9.62□□□□□ -0.87
BEST3-212ENST00000553096 AMER1Q5JTC6 1135 aaPredicted RBP9.62□□□□□ -0.87
BEST3-212ENST00000553096 SETD1AO15047 1707 aaKnown RBP9.61□□□□□ -0.87
BEST3-212ENST00000553096 NEFMP07197 916 aa9.61□□□□□ -0.87
BEST3-212ENST00000553096 SBNO2Q9Y2G9 1366 aa9.6□□□□□ -0.87
BEST3-212ENST00000553096 TULP4Q9NRJ4 1543 aa9.6□□□□□ -0.87
BEST3-212ENST00000553096 CHGAP10645 457 aaKnown RBP9.6□□□□□ -0.87
BEST3-212ENST00000553096 ARHGEF40Q8TER5 1519 aa9.6□□□□□ -0.87
BEST3-212ENST00000553096 SHPRHQ149N8 1683 aa9.6□□□□□ -0.87
BEST3-212ENST00000553096 USP32Q8NFA0 1604 aa9.6□□□□□ -0.87
BEST3-212ENST00000553096 AGLP35573 1532 aa9.6□□□□□ -0.87
BEST3-212ENST00000553096 C14orf93Q9H972 538 aaKnown RBP9.59□□□□□ -0.87
BEST3-212ENST00000553096 TAOK2Q9UL54 1235 aa9.59□□□□□ -0.87
BEST3-212ENST00000553096 NUTM2DQ5VT03 806 aaPredicted RBP9.58□□□□□ -0.88
BEST3-212ENST00000553096 TMEM132EQ6IEE7 984 aa9.58□□□□□ -0.88
BEST3-212ENST00000553096 PPP2R1AP30153 589 aa9.57□□□□□ -0.88
BEST3-212ENST00000553096 CARD14Q9BXL6 1004 aa9.57□□□□□ -0.88
BEST3-212ENST00000553096 RPGRIP1LQ68CZ1 1315 aa9.57□□□□□ -0.88
BEST3-212ENST00000553096 SPATA31D1Q6ZQQ2 1576 aa9.57□□□□□ -0.88
BEST3-212ENST00000553096 IDI1Q13907 227 aa9.57□□□□□ -0.88
BEST3-212ENST00000553096 NPC1L1Q9UHC9 1359 aa9.57□□□□□ -0.88
BEST3-212ENST00000553096 CENPJQ9HC77 1338 aaPredicted RBP9.56□□□□□ -0.88
BEST3-212ENST00000553096 ZFYVE9O95405 1425 aa9.56□□□□□ -0.88
BEST3-212ENST00000553096 TRAK1Q9UPV9 953 aa9.56□□□□□ -0.88
BEST3-212ENST00000553096 LAS1LQ9Y4W2 734 aaKnown RBP9.56□□□□□ -0.88
BEST3-212ENST00000553096 NRXN3Q9Y4C0 1643 aa9.56□□□□□ -0.88
BEST3-212ENST00000553096 CDCA8Q53HL2 280 aa9.55□□□□□ -0.88
BEST3-212ENST00000553096 KNSTRNQ9Y448 316 aa9.55□□□□□ -0.88
BEST3-212ENST00000553096 PTPRMP28827 1452 aa9.55□□□□□ -0.88
BEST3-212ENST00000553096 FBXO31Q5XUX0 539 aaPredicted RBP9.55□□□□□ -0.88
BEST3-212ENST00000553096 ALKQ9UM73 1620 aa9.55□□□□□ -0.88
BEST3-212ENST00000553096 ANKRD26Q9UPS8 1709 aa9.54□□□□□ -0.88
BEST3-212ENST00000553096 NAP1L5Q96NT1 182 aaPredicted RBP9.54□□□□□ -0.88
BEST3-212ENST00000553096 CEBPAP49715 358 aaPredicted RBP9.53□□□□□ -0.88
BEST3-212ENST00000553096 CENPQQ7L2Z9 268 aaPredicted RBP9.53□□□□□ -0.88
BEST3-212ENST00000553096 GSE1Q14687 1217 aa9.53□□□□□ -0.88
BEST3-212ENST00000553096 CDCA7LQ96GN5 454 aa9.52□□□□□ -0.88
BEST3-212ENST00000553096 ADAMTS8Q9UP79 889 aa9.52□□□□□ -0.88
BEST3-212ENST00000553096 NSD3Q9BZ95 1437 aa9.52□□□□□ -0.88
BEST3-212ENST00000553096 PLEKHH1Q9ULM0 1364 aa9.52□□□□□ -0.88
BEST3-212ENST00000553096 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.52□□□□□ -0.89
BEST3-212ENST00000553096 CRBNQ96SW2 442 aa9.52□□□□□ -0.89
BEST3-212ENST00000553096 SENP3Q9H4L4 574 aaPredicted RBP9.52□□□□□ -0.89
BEST3-212ENST00000553096 A2ML1A8K2U0 1454 aa9.51□□□□□ -0.89
BEST3-212ENST00000553096 SLC52A1Q9NWF4 448 aa9.51□□□□□ -0.89
BEST3-212ENST00000553096 KIF20BQ96Q89 1820 aa9.51□□□□□ -0.89
BEST3-212ENST00000553096 ADAMTSL3P82987 1691 aa9.51□□□□□ -0.89
BEST3-212ENST00000553096 ESF1Q9H501 851 aaKnown RBP9.51□□□□□ -0.89
BEST3-212ENST00000553096 KDM2BQ8NHM5 1336 aa9.5□□□□□ -0.89
BEST3-212ENST00000553096 VGFO15240 615 aaPredicted RBP9.5□□□□□ -0.89
BEST3-212ENST00000553096 FAM161AQ3B820 660 aa9.5□□□□□ -0.89
BEST3-212ENST00000553096 SLC12A5Q9H2X9 1139 aa9.5□□□□□ -0.89
BEST3-212ENST00000553096 NAP1L2Q9ULW6 460 aaPredicted RBP9.5□□□□□ -0.89
BEST3-212ENST00000553096 UBR1Q8IWV7 1749 aa9.5□□□□□ -0.89
BEST3-212ENST00000553096 RIMS1Q86UR5 1692 aaKnown RBP9.5□□□□□ -0.89
BEST3-212ENST00000553096 CD163L1Q9NR16 1453 aa9.49□□□□□ -0.89
BEST3-212ENST00000553096 NFKBIBQ15653 356 aa9.49□□□□□ -0.89
BEST3-212ENST00000553096 YTHDC2Q9H6S0 1430 aaKnown RBP9.49□□□□□ -0.89
BEST3-212ENST00000553096 ZNF521Q96K83 1311 aa9.49□□□□□ -0.89
BEST3-212ENST00000553096 KNDC1Q76NI1 1749 aa9.49□□□□□ -0.89
BEST3-212ENST00000553096 PLIN1O60240 522 aa9.47□□□□□ -0.89
BEST3-212ENST00000553096 FER1L4A9Z1Z3 1794 aa9.47□□□□□ -0.89
BEST3-212ENST00000553096 TPRNQ4KMQ1 711 aa9.47□□□□□ -0.89
BEST3-212ENST00000553096 CHMP4BQ9H444 224 aaKnown RBP9.46□□□□□ -0.89
BEST3-212ENST00000553096 ANKRD36BQ8N2N9 1353 aa9.46□□□□□ -0.89
BEST3-212ENST00000553096 IQSEC2Q5JU85 1478 aa9.46□□□□□ -0.89
BEST3-212ENST00000553096 DLC1Q96QB1 1528 aa9.46□□□□□ -0.89
BEST3-212ENST00000553096 SAFB2Q14151 953 aaKnown RBP eCLIP9.46□□□□□ -0.9
BEST3-212ENST00000553096 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.46□□□□□ -0.9
BEST3-212ENST00000553096 CNKSR2Q8WXI2 1034 aa9.46□□□□□ -0.9
BEST3-212ENST00000553096 CABP2Q9NPB3 220 aa9.46□□□□□ -0.9
BEST3-212ENST00000553096 POLR3AO14802 1390 aaPredicted RBP9.46□□□□□ -0.9
BEST3-212ENST00000553096 NLRP1Q9C000 1473 aa9.46□□□□□ -0.9
BEST3-212ENST00000553096 WDR43Q15061 677 aaKnown RBP eCLIP9.45□□□□□ -0.9
BEST3-212ENST00000553096 CCDC146Q8IYE0 955 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms