RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 SHPRHQ149N8 1683 aa15.69■□□□□ 0.1
DDX23-217ENST00000553065 TECPR2O15040 1411 aa15.68■□□□□ 0.1
DDX23-217ENST00000553065 NRXN1Q9ULB1 1477 aa15.68■□□□□ 0.1
DDX23-217ENST00000553065 PNPLA6Q8IY17 1366 aa15.68■□□□□ 0.1
DDX23-217ENST00000553065 HRCP23327 699 aa15.67■□□□□ 0.1
DDX23-217ENST00000553065 SIRT1Q96EB6 747 aa15.66■□□□□ 0.1
DDX23-217ENST00000553065 LAMC1P11047 1609 aa15.65■□□□□ 0.1
DDX23-217ENST00000553065 YTHDC2Q9H6S0 1430 aaKnown RBP15.65■□□□□ 0.1
DDX23-217ENST00000553065 ACIN1Q9UKV3 1341 aaKnown RBP15.65■□□□□ 0.1
DDX23-217ENST00000553065 NUTM2FA1L443 756 aa15.64■□□□□ 0.09
DDX23-217ENST00000553065 ESCO1Q5FWF5 840 aa15.63■□□□□ 0.09
DDX23-217ENST00000553065 FOXO3O43524 673 aa15.62■□□□□ 0.09
DDX23-217ENST00000553065 MEX3CQ5U5Q3 659 aaKnown RBP15.62■□□□□ 0.09
DDX23-217ENST00000553065 ZNF772Q68DY9 489 aaPredicted RBP15.62■□□□□ 0.09
DDX23-217ENST00000553065 AFF2P51816 1311 aa15.62■□□□□ 0.09
DDX23-217ENST00000553065 DHX57Q6P158 1386 aaKnown RBP15.62■□□□□ 0.09
DDX23-217ENST00000553065 XPCQ01831 940 aaPredicted RBP15.61■□□□□ 0.09
DDX23-217ENST00000553065 MYOM2P54296 1465 aa15.59■□□□□ 0.09
DDX23-217ENST00000553065 CDC42BPGQ6DT37 1551 aa15.59■□□□□ 0.09
DDX23-217ENST00000553065 C8orf37Q96NL8 207 aa15.59■□□□□ 0.09
DDX23-217ENST00000553065 KDM2AQ9Y2K7 1162 aa15.59■□□□□ 0.09
DDX23-217ENST00000553065 PXDNQ92626 1479 aa15.59■□□□□ 0.09
DDX23-217ENST00000553065 ADAMTS2O95450 1211 aa15.58■□□□□ 0.08
DDX23-217ENST00000553065 PRAM1Q96QH2 718 aa15.58■□□□□ 0.08
DDX23-217ENST00000553065 QTRT2Q9H974 415 aaKnown RBP15.58■□□□□ 0.08
DDX23-217ENST00000553065 KNDC1Q76NI1 1749 aa15.57■□□□□ 0.08
DDX23-217ENST00000553065 RXRBP28702 533 aa15.57■□□□□ 0.08
DDX23-217ENST00000553065 DCAF11Q8TEB1 546 aa15.57■□□□□ 0.08
DDX23-217ENST00000553065 ADGRB1O14514 1584 aa15.57■□□□□ 0.08
DDX23-217ENST00000553065 SAFB2Q14151 953 aaKnown RBP eCLIP15.56■□□□□ 0.08
DDX23-217ENST00000553065 FNBP4Q8N3X1 1017 aaPredicted RBP15.56■□□□□ 0.08
DDX23-217ENST00000553065 NPHP3Q7Z494 1330 aa15.55■□□□□ 0.08
DDX23-217ENST00000553065 UPF1Q92900 1129 aaKnown RBP eCLIP15.55■□□□□ 0.08
DDX23-217ENST00000553065 NGLY1Q96IV0 654 aa15.54■□□□□ 0.08
DDX23-217ENST00000553065 TRAK1Q9UPV9 953 aa15.54■□□□□ 0.08
DDX23-217ENST00000553065 KRT28Q7Z3Y7 464 aa15.53■□□□□ 0.08
DDX23-217ENST00000553065 FMN2Q9NZ56 1722 aa15.53■□□□□ 0.08
DDX23-217ENST00000553065 SPATA31A3Q5VYP0 1347 aa15.52■□□□□ 0.08
DDX23-217ENST00000553065 RGPD8O14715 1765 aaPredicted RBP15.52■□□□□ 0.07
DDX23-217ENST00000553065 COL22A1Q8NFW1 1626 aaPredicted RBP15.51■□□□□ 0.07
DDX23-217ENST00000553065 PRR36Q9H6K5 1346 aa15.51■□□□□ 0.07
DDX23-217ENST00000553065 RBM6P78332 1123 aaKnown RBP15.51■□□□□ 0.07
DDX23-217ENST00000553065 PHF8Q9UPP1 1060 aa15.51■□□□□ 0.07
DDX23-217ENST00000553065 DLC1Q96QB1 1528 aa15.51■□□□□ 0.07
DDX23-217ENST00000553065 HIRIP3Q9BW71 556 aaPredicted RBP15.5■□□□□ 0.07
DDX23-217ENST00000553065 USP21Q9UK80 565 aa15.5■□□□□ 0.07
DDX23-217ENST00000553065 BCL9LQ86UU0 1499 aa15.5■□□□□ 0.07
DDX23-217ENST00000553065 CDK12Q9NYV4 1490 aaPredicted RBP15.49■□□□□ 0.07
DDX23-217ENST00000553065 PMFBP1Q8TBY8 1022 aa15.49■□□□□ 0.07
DDX23-217ENST00000553065 USP32Q8NFA0 1604 aa15.49■□□□□ 0.07
DDX23-217ENST00000553065 NBPF1Q3BBV0 1214 aa15.48■□□□□ 0.07
DDX23-217ENST00000553065 CABLES1Q8TDN4 633 aa15.48■□□□□ 0.07
DDX23-217ENST00000553065 STAC3Q96MF2 364 aa15.48■□□□□ 0.07
DDX23-217ENST00000553065 POGKQ9P215 609 aa15.48■□□□□ 0.07
DDX23-217ENST00000553065 RGS12O14924 1447 aa15.48■□□□□ 0.07
DDX23-217ENST00000553065 MINK1Q8N4C8 1332 aaPredicted RBP15.47■□□□□ 0.07
DDX23-217ENST00000553065 WASLO00401 505 aaPredicted RBP15.46■□□□□ 0.07
DDX23-217ENST00000553065 ATRNO75882 1429 aa15.45■□□□□ 0.06
DDX23-217ENST00000553065 TRPC5Q9UL62 973 aaPredicted RBP15.44■□□□□ 0.06
DDX23-217ENST00000553065 PSME1Q06323 249 aa15.43■□□□□ 0.06
DDX23-217ENST00000553065 SIN3AQ96ST3 1273 aa15.43■□□□□ 0.06
DDX23-217ENST00000553065 SBNO1A3KN83 1393 aa15.42■□□□□ 0.06
DDX23-217ENST00000553065 SLIT2O94813 1529 aa15.42■□□□□ 0.06
DDX23-217ENST00000553065 ANKARQ7Z5J8 1434 aa15.42■□□□□ 0.06
DDX23-217ENST00000553065 ADGRB2O60241 1585 aa15.41■□□□□ 0.06
DDX23-217ENST00000553065 FAM83GA6ND36 823 aa15.41■□□□□ 0.06
DDX23-217ENST00000553065 GJD4Q96KN9 370 aaPredicted RBP15.41■□□□□ 0.06
DDX23-217ENST00000553065 KIF1AQ12756 1690 aa15.41■□□□□ 0.06
DDX23-217ENST00000553065 UNC5CLQ8IV45 518 aa15.4■□□□□ 0.06
DDX23-217ENST00000553065 L3MBTL2Q969R5 705 aa15.4■□□□□ 0.06
DDX23-217ENST00000553065 TNS3Q68CZ2 1445 aa15.4■□□□□ 0.06
DDX23-217ENST00000553065 PLEKHG5O94827 1062 aa15.39■□□□□ 0.05
DDX23-217ENST00000553065 NUDT16Q96DE0 195 aaKnown RBP15.39■□□□□ 0.05
DDX23-217ENST00000553065 CDK19Q9BWU1 502 aa15.39■□□□□ 0.05
DDX23-217ENST00000553065 MARF1Q9Y4F3 1742 aaKnown RBP15.38■□□□□ 0.05
DDX23-217ENST00000553065 EP400Q96L91 3159 aa15.37■□□□□ 0.05
DDX23-217ENST00000553065 ARHGEF28Q8N1W1 1705 aaKnown RBP15.37■□□□□ 0.05
DDX23-217ENST00000553065 TRPM3Q9HCF6 1732 aaPredicted RBP15.37■□□□□ 0.05
DDX23-217ENST00000553065 LMOD2Q6P5Q4 547 aa15.36■□□□□ 0.05
DDX23-217ENST00000553065 TULP4Q9NRJ4 1543 aa15.36■□□□□ 0.05
DDX23-217ENST00000553065 ONECUT3O60422 494 aaPredicted RBP15.35■□□□□ 0.05
DDX23-217ENST00000553065 GLI3P10071 1580 aa15.35■□□□□ 0.05
DDX23-217ENST00000553065 ATP7BP35670 1465 aa15.34■□□□□ 0.05
DDX23-217ENST00000553065 RALGAPBQ86X10 1494 aa15.34■□□□□ 0.05
DDX23-217ENST00000553065 PLEKHG3A1L390 1219 aa15.33■□□□□ 0.04
DDX23-217ENST00000553065 VPS72Q15906 364 aa15.33■□□□□ 0.04
DDX23-217ENST00000553065 NBPF8Q3BBV2 869 aa15.33■□□□□ 0.04
DDX23-217ENST00000553065 NGDNQ8NEJ9 315 aaKnown RBP15.33■□□□□ 0.04
DDX23-217ENST00000553065 ARHGEF10O15013 1369 aa15.33■□□□□ 0.04
DDX23-217ENST00000553065 ALS2Q96Q42 1657 aa15.32■□□□□ 0.04
DDX23-217ENST00000553065 KIAA1210Q9ULL0 1709 aa15.31■□□□□ 0.04
DDX23-217ENST00000553065 CCDC61Q9Y6R9 512 aa15.31■□□□□ 0.04
DDX23-217ENST00000553065 ACEP12821 1306 aa15.31■□□□□ 0.04
DDX23-217ENST00000553065 POLR3AO14802 1390 aaPredicted RBP15.3■□□□□ 0.04
DDX23-217ENST00000553065 NEUROD1Q13562 356 aa15.3■□□□□ 0.04
DDX23-217ENST00000553065 GPRASP1Q5JY77 1395 aa15.3■□□□□ 0.04
DDX23-217ENST00000553065 ABCA3Q99758 1704 aa15.3■□□□□ 0.04
DDX23-217ENST00000553065 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.3■□□□□ 0.04
DDX23-217ENST00000553065 SRCAPQ6ZRS2 3230 aa15.3■□□□□ 0.04
DDX23-217ENST00000553065 SEPT12Q8IYM1 358 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms