RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 ALKQ9UM73 1620 aa15.62■□□□□ 0.09
CACNB3-224ENST00000552812 ANP32CO43423 234 aa15.61■□□□□ 0.09
CACNB3-224ENST00000552812 MKRN4PQ13434 485 aaPredicted RBP15.61■□□□□ 0.09
CACNB3-224ENST00000552812 ASXL1Q8IXJ9 1541 aa15.6■□□□□ 0.09
CACNB3-224ENST00000552812 DISP3Q9P2K9 1392 aa15.6■□□□□ 0.09
CACNB3-224ENST00000552812 CDCA8Q53HL2 280 aa15.6■□□□□ 0.09
CACNB3-224ENST00000552812 ZNF692Q9BU19 519 aaPredicted RBP15.6■□□□□ 0.09
CACNB3-224ENST00000552812 SLIT1O75093 1534 aa15.59■□□□□ 0.09
CACNB3-224ENST00000552812 SETD1AO15047 1707 aaKnown RBP15.58■□□□□ 0.08
CACNB3-224ENST00000552812 TMEM132EQ6IEE7 984 aa15.58■□□□□ 0.08
CACNB3-224ENST00000552812 ARHGEF28Q8N1W1 1705 aaKnown RBP15.58■□□□□ 0.08
CACNB3-224ENST00000552812 NRXN3Q9Y4C0 1643 aa15.58■□□□□ 0.08
CACNB3-224ENST00000552812 ARHGAP23Q9P227 1491 aa15.58■□□□□ 0.08
CACNB3-224ENST00000552812 CENPJQ9HC77 1338 aaPredicted RBP15.58■□□□□ 0.08
CACNB3-224ENST00000552812 POLR3GLQ9BT43 218 aa15.57■□□□□ 0.08
CACNB3-224ENST00000552812 CEP170BQ9Y4F5 1589 aaPredicted RBP15.56■□□□□ 0.08
CACNB3-224ENST00000552812 QRICH2Q9H0J4 1663 aa15.56■□□□□ 0.08
CACNB3-224ENST00000552812 TRAK1Q9UPV9 953 aa15.56■□□□□ 0.08
CACNB3-224ENST00000552812 ZNF142P52746 1687 aaPredicted RBP15.56■□□□□ 0.08
CACNB3-224ENST00000552812 YTHDC2Q9H6S0 1430 aaKnown RBP15.55■□□□□ 0.08
CACNB3-224ENST00000552812 THEMISQ8N1K5 641 aaPredicted RBP15.55■□□□□ 0.08
CACNB3-224ENST00000552812 PTPRMP28827 1452 aa15.55■□□□□ 0.08
CACNB3-224ENST00000552812 SETD1BQ9UPS6 1966 aaKnown RBP15.55■□□□□ 0.08
CACNB3-224ENST00000552812 PLEKHG1Q9ULL1 1385 aa15.54■□□□□ 0.08
CACNB3-224ENST00000552812 DLC1Q96QB1 1528 aa15.53■□□□□ 0.08
CACNB3-224ENST00000552812 CCER2I3L3R5 266 aa15.53■□□□□ 0.08
CACNB3-224ENST00000552812 EID1Q9Y6B2 187 aa15.53■□□□□ 0.08
CACNB3-224ENST00000552812 LRPPRCP42704 1394 aaKnown RBP15.52■□□□□ 0.07
CACNB3-224ENST00000552812 CHADLQ6NUI6 762 aa15.51■□□□□ 0.07
CACNB3-224ENST00000552812 TXNDC2Q86VQ3 553 aa15.51■□□□□ 0.07
CACNB3-224ENST00000552812 ABCC11Q96J66 1382 aa15.5■□□□□ 0.07
CACNB3-224ENST00000552812 LTKP29376 864 aa15.5■□□□□ 0.07
CACNB3-224ENST00000552812 ADAMTS13Q76LX8 1427 aa15.49■□□□□ 0.07
CACNB3-224ENST00000552812 KNDC1Q76NI1 1749 aa15.49■□□□□ 0.07
CACNB3-224ENST00000552812 PUS7Q96PZ0 661 aaKnown RBP15.49■□□□□ 0.07
CACNB3-224ENST00000552812 MED14O60244 1454 aa15.49■□□□□ 0.07
CACNB3-224ENST00000552812 PRKRIP1Q9H875 184 aaPredicted RBP15.48■□□□□ 0.07
CACNB3-224ENST00000552812 MYOM1P52179 1685 aa15.48■□□□□ 0.07
CACNB3-224ENST00000552812 TECPR2O15040 1411 aa15.48■□□□□ 0.07
CACNB3-224ENST00000552812 DIP2AQ14689 1571 aa15.48■□□□□ 0.07
CACNB3-224ENST00000552812 STK26Q9P289 416 aa15.48■□□□□ 0.07
CACNB3-224ENST00000552812 METP08581 1390 aa15.48■□□□□ 0.07
CACNB3-224ENST00000552812 EVC2Q86UK5 1308 aa15.46■□□□□ 0.07
CACNB3-224ENST00000552812 KTN1Q86UP2 1357 aaKnown RBP15.46■□□□□ 0.07
CACNB3-224ENST00000552812 CPS1P31327 1500 aa15.46■□□□□ 0.06
CACNB3-224ENST00000552812 SIRT1Q96EB6 747 aa15.46■□□□□ 0.06
CACNB3-224ENST00000552812 BCANQ96GW7 911 aa15.46■□□□□ 0.06
CACNB3-224ENST00000552812 PRAM1Q96QH2 718 aa15.46■□□□□ 0.06
CACNB3-224ENST00000552812 TULP4Q9NRJ4 1543 aa15.46■□□□□ 0.06
CACNB3-224ENST00000552812 FAM135BQ49AJ0 1406 aa15.45■□□□□ 0.06
CACNB3-224ENST00000552812 PER1O15534 1290 aaPredicted RBP15.45■□□□□ 0.06
CACNB3-224ENST00000552812 POGKQ9P215 609 aa15.45■□□□□ 0.06
CACNB3-224ENST00000552812 PANK3Q9H999 370 aa15.44■□□□□ 0.06
CACNB3-224ENST00000552812 PRR29P0C7W0 189 aa15.43■□□□□ 0.06
CACNB3-224ENST00000552812 TBX22Q9Y458 520 aa15.43■□□□□ 0.06
CACNB3-224ENST00000552812 ANKLE2Q86XL3 938 aa15.41■□□□□ 0.06
CACNB3-224ENST00000552812 RALBP1Q15311 655 aa15.4■□□□□ 0.06
CACNB3-224ENST00000552812 PIK3R4Q99570 1358 aa15.4■□□□□ 0.06
CACNB3-224ENST00000552812 NINLQ9Y2I6 1382 aa15.4■□□□□ 0.06
CACNB3-224ENST00000552812 SAFB2Q14151 953 aaKnown RBP eCLIP15.4■□□□□ 0.06
CACNB3-224ENST00000552812 ATAD2Q6PL18 1390 aa15.39■□□□□ 0.05
CACNB3-224ENST00000552812 SLC26A8Q96RN1 970 aa15.38■□□□□ 0.05
CACNB3-224ENST00000552812 PARD3Q8TEW0 1356 aa15.38■□□□□ 0.05
CACNB3-224ENST00000552812 NPC1L1Q9UHC9 1359 aa15.38■□□□□ 0.05
CACNB3-224ENST00000552812 MINK1Q8N4C8 1332 aaPredicted RBP15.38■□□□□ 0.05
CACNB3-224ENST00000552812 KNSTRNQ9Y448 316 aa15.37■□□□□ 0.05
CACNB3-224ENST00000552812 PLEKHH1Q9ULM0 1364 aa15.37■□□□□ 0.05
CACNB3-224ENST00000552812 PTCH1Q13635 1447 aa15.37■□□□□ 0.05
CACNB3-224ENST00000552812 WAPLQ7Z5K2 1190 aa15.37■□□□□ 0.05
CACNB3-224ENST00000552812 PTPRUQ92729 1446 aa15.36■□□□□ 0.05
CACNB3-224ENST00000552812 ROBO2Q9HCK4 1378 aa15.36■□□□□ 0.05
CACNB3-224ENST00000552812 XRN1Q8IZH2 1706 aaKnown RBP15.36■□□□□ 0.05
CACNB3-224ENST00000552812 ADGRB2O60241 1585 aa15.35■□□□□ 0.05
CACNB3-224ENST00000552812 POTEIP0CG38 1075 aa15.35■□□□□ 0.05
CACNB3-224ENST00000552812 SRPK2P78362 688 aaKnown RBP15.35■□□□□ 0.05
CACNB3-224ENST00000552812 YTHDC1Q96MU7 727 aaKnown RBP15.35■□□□□ 0.05
CACNB3-224ENST00000552812 CABP2Q9NPB3 220 aa15.34■□□□□ 0.05
CACNB3-224ENST00000552812 MYBBP1AQ9BQG0 1328 aaKnown RBP15.34■□□□□ 0.05
CACNB3-224ENST00000552812 ANKRD36BQ8N2N9 1353 aa15.34■□□□□ 0.05
CACNB3-224ENST00000552812 CENPBP07199 599 aaPredicted RBP15.34■□□□□ 0.05
CACNB3-224ENST00000552812 AMER1Q5JTC6 1135 aaPredicted RBP15.34■□□□□ 0.05
CACNB3-224ENST00000552812 USP32Q8NFA0 1604 aa15.33■□□□□ 0.05
CACNB3-224ENST00000552812 CLCN6P51797 869 aa15.33■□□□□ 0.04
CACNB3-224ENST00000552812 TMC1Q8TDI8 760 aa15.33■□□□□ 0.04
CACNB3-224ENST00000552812 CDK19Q9BWU1 502 aa15.33■□□□□ 0.04
CACNB3-224ENST00000552812 SLC12A5Q9H2X9 1139 aa15.33■□□□□ 0.04
CACNB3-224ENST00000552812 AMOTL2Q9Y2J4 779 aa15.33■□□□□ 0.04
CACNB3-224ENST00000552812 NPHP4O75161 1426 aaPredicted RBP15.32■□□□□ 0.04
CACNB3-224ENST00000552812 MRS2Q9HD23 443 aa15.32■□□□□ 0.04
CACNB3-224ENST00000552812 WASLO00401 505 aaPredicted RBP15.31■□□□□ 0.04
CACNB3-224ENST00000552812 CD44P16070 742 aaKnown RBP15.31■□□□□ 0.04
CACNB3-224ENST00000552812 BRD4O60885 1362 aaPredicted RBP15.31■□□□□ 0.04
CACNB3-224ENST00000552812 KDM4FA0A1W2PPD8 638 aa15.31■□□□□ 0.04
CACNB3-224ENST00000552812 CC2D1BQ5T0F9 858 aaKnown RBP15.31■□□□□ 0.04
CACNB3-224ENST00000552812 CARD14Q9BXL6 1004 aa15.31■□□□□ 0.04
CACNB3-224ENST00000552812 CHD2O14647 1828 aaKnown RBP15.3■□□□□ 0.04
CACNB3-224ENST00000552812 NLRP13Q86W25 1043 aa15.3■□□□□ 0.04
CACNB3-224ENST00000552812 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.3■□□□□ 0.04
CACNB3-224ENST00000552812 CNGB1Q14028 1251 aaPredicted RBP15.29■□□□□ 0.04
CACNB3-224ENST00000552812 CCDC184Q52MB2 194 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms