RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 RIC3Q7Z5B4 369 aa6.87□□□□□ -1.31
NPAS3-212ENST00000552696 SPSB2Q99619 263 aa6.87□□□□□ -1.31
NPAS3-212ENST00000552696 POLR3EQ9NVU0 708 aa6.87□□□□□ -1.31
NPAS3-212ENST00000552696 GJA5P36382 358 aa6.86□□□□□ -1.31
NPAS3-212ENST00000552696 SYMPKQ92797 1274 aaKnown RBP6.86□□□□□ -1.31
NPAS3-212ENST00000552696 SALL2Q9Y467 1007 aaPredicted RBP6.86□□□□□ -1.31
NPAS3-212ENST00000552696 PCDHB15Q9Y5E8 787 aa6.86□□□□□ -1.31
NPAS3-212ENST00000552696 C6orf229H3BNL8 230 aa6.85□□□□□ -1.31
NPAS3-212ENST00000552696 PRDM9Q9NQV7 894 aa6.85□□□□□ -1.31
NPAS3-212ENST00000552696 A0A0G2JS52 829 aa6.84□□□□□ -1.31
NPAS3-212ENST00000552696 S1PR4O95977 384 aa6.84□□□□□ -1.31
NPAS3-212ENST00000552696 SKIV2LQ15477 1246 aaKnown RBP6.84□□□□□ -1.31
NPAS3-212ENST00000552696 QPCTQ16769 361 aa6.84□□□□□ -1.31
NPAS3-212ENST00000552696 RETREG3Q86VR2 466 aa6.84□□□□□ -1.31
NPAS3-212ENST00000552696 FAM160A2Q8N612 972 aaPredicted RBP6.84□□□□□ -1.31
NPAS3-212ENST00000552696 CABLES1Q8TDN4 633 aa6.84□□□□□ -1.31
NPAS3-212ENST00000552696 USB1Q9BQ65 265 aaKnown RBP6.84□□□□□ -1.31
NPAS3-212ENST00000552696 MTMR2Q13614 643 aa6.83□□□□□ -1.32
NPAS3-212ENST00000552696 MSS51Q4VC12 460 aa6.83□□□□□ -1.32
NPAS3-212ENST00000552696 PROCA1Q8NCQ7 364 aaPredicted RBP6.83□□□□□ -1.32
NPAS3-212ENST00000552696 SLC6A16Q9GZN6 736 aa6.83□□□□□ -1.32
NPAS3-212ENST00000552696 HRCP23327 699 aa6.82□□□□□ -1.32
NPAS3-212ENST00000552696 TUSC1Q2TAM9 212 aa6.82□□□□□ -1.32
NPAS3-212ENST00000552696 PPP1R18Q6NYC8 613 aa6.82□□□□□ -1.32
NPAS3-212ENST00000552696 ZBTB3Q9H5J0 574 aa6.82□□□□□ -1.32
NPAS3-212ENST00000552696 ATP1B4Q9UN42 357 aaPredicted RBP6.82□□□□□ -1.32
NPAS3-212ENST00000552696 GGCXP38435 758 aa6.81□□□□□ -1.32
NPAS3-212ENST00000552696 PRPF38BQ5VTL8 546 aaKnown RBP6.81□□□□□ -1.32
NPAS3-212ENST00000552696 PCMTD1Q96MG8 357 aaPredicted RBP6.81□□□□□ -1.32
NPAS3-212ENST00000552696 GOPCQ9HD26 462 aa6.81□□□□□ -1.32
NPAS3-212ENST00000552696 NUTM2BA6NNL0 878 aaPredicted RBP6.8□□□□□ -1.32
NPAS3-212ENST00000552696 NUTM2EB1AL46 878 aaPredicted RBP6.8□□□□□ -1.32
NPAS3-212ENST00000552696 LILRB3O75022 631 aa6.8□□□□□ -1.32
NPAS3-212ENST00000552696 NUTM2DQ5VT03 806 aaPredicted RBP6.8□□□□□ -1.32
NPAS3-212ENST00000552696 FBXO31Q5XUX0 539 aaPredicted RBP6.8□□□□□ -1.32
NPAS3-212ENST00000552696 NUTM2AQ8IVF1 878 aaPredicted RBP6.8□□□□□ -1.32
NPAS3-212ENST00000552696 PRR7Q8TB68 274 aa6.8□□□□□ -1.32
NPAS3-212ENST00000552696 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.8□□□□□ -1.32
NPAS3-212ENST00000552696 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.8□□□□□ -1.32
NPAS3-212ENST00000552696 SPDYE5A6NIY4 337 aa6.79□□□□□ -1.32
NPAS3-212ENST00000552696 CFAP99D6REC4 459 aa6.79□□□□□ -1.32
NPAS3-212ENST00000552696 RNF223E7ERA6 249 aa6.79□□□□□ -1.32
NPAS3-212ENST00000552696 PPEF1O14829 653 aaPredicted RBP6.79□□□□□ -1.32
NPAS3-212ENST00000552696 MMP16P51512 607 aa6.79□□□□□ -1.32
NPAS3-212ENST00000552696 RTL5Q5HYW3 569 aaPredicted RBP6.79□□□□□ -1.32
NPAS3-212ENST00000552696 DXOO77932 396 aaKnown RBP6.78□□□□□ -1.32
NPAS3-212ENST00000552696 JUNDP17535 347 aa6.78□□□□□ -1.32
NPAS3-212ENST00000552696 FCF1Q9Y324 198 aaKnown RBP6.78□□□□□ -1.32
NPAS3-212ENST00000552696 PPP2R2DQ66LE6 453 aa6.76□□□□□ -1.33
NPAS3-212ENST00000552696 ANKLE1Q8NAG6 615 aa6.76□□□□□ -1.33
NPAS3-212ENST00000552696 TSC1Q92574 1164 aa6.76□□□□□ -1.33
NPAS3-212ENST00000552696 PLA2G2CQ5R387 149 aa6.75□□□□□ -1.33
NPAS3-212ENST00000552696 RFC5P40937 340 aa6.74□□□□□ -1.33
NPAS3-212ENST00000552696 DESI1Q6ICB0 168 aa6.74□□□□□ -1.33
NPAS3-212ENST00000552696 HELBQ8NG08 1087 aaPredicted RBP6.74□□□□□ -1.33
NPAS3-212ENST00000552696 PTPRNQ16849 979 aa6.73□□□□□ -1.33
NPAS3-212ENST00000552696 TMEM132AQ24JP5 1023 aa6.73□□□□□ -1.33
NPAS3-212ENST00000552696 NUDT12Q9BQG2 462 aa6.73□□□□□ -1.33
NPAS3-212ENST00000552696 PER1O15534 1290 aaPredicted RBP6.72□□□□□ -1.33
NPAS3-212ENST00000552696 AP1G2O75843 785 aa6.72□□□□□ -1.33
NPAS3-212ENST00000552696 CCNYL3P0C7X3 344 aa6.72□□□□□ -1.33
NPAS3-212ENST00000552696 LYPD8Q6UX82 237 aa6.72□□□□□ -1.33
NPAS3-212ENST00000552696 CCDC24Q8N4L8 307 aa6.72□□□□□ -1.33
NPAS3-212ENST00000552696 EMID1Q96A84 441 aaPredicted RBP6.72□□□□□ -1.33
NPAS3-212ENST00000552696 PRKD2Q9BZL6 878 aa6.72□□□□□ -1.33
NPAS3-212ENST00000552696 USP17L8P0C7I0 530 aa6.7□□□□□ -1.34
NPAS3-212ENST00000552696 CTDSPL2Q05D32 466 aa6.7□□□□□ -1.34
NPAS3-212ENST00000552696 LIAT1Q6ZQX7 453 aa6.7□□□□□ -1.34
NPAS3-212ENST00000552696 RGS20O76081 388 aa6.69□□□□□ -1.34
NPAS3-212ENST00000552696 F12P00748 615 aaPredicted RBP6.69□□□□□ -1.34
NPAS3-212ENST00000552696 SLC19A1P41440 591 aa6.69□□□□□ -1.34
NPAS3-212ENST00000552696 MAP10Q9P2G4 905 aa6.69□□□□□ -1.34
NPAS3-212ENST00000552696 CTHP32929 405 aa6.68□□□□□ -1.34
NPAS3-212ENST00000552696 KCNH2Q12809 1159 aa6.68□□□□□ -1.34
NPAS3-212ENST00000552696 TMEM259Q4ZIN3 620 aa6.68□□□□□ -1.34
NPAS3-212ENST00000552696 PTCRAQ6ISU1 281 aaPredicted RBP6.68□□□□□ -1.34
NPAS3-212ENST00000552696 LRRN4Q8WUT4 740 aa6.68□□□□□ -1.34
NPAS3-212ENST00000552696 EVA1BQ9NVM1 165 aa6.68□□□□□ -1.34
NPAS3-212ENST00000552696 V9GY48 417 aaPredicted RBP6.68□□□□□ -1.34
NPAS3-212ENST00000552696 ZBTB24O43167 697 aaPredicted RBP6.67□□□□□ -1.34
NPAS3-212ENST00000552696 RPIAP49247 311 aa6.67□□□□□ -1.34
NPAS3-212ENST00000552696 TRIM32Q13049 653 aa6.67□□□□□ -1.34
NPAS3-212ENST00000552696 SPRYD7Q5W111 196 aa6.67□□□□□ -1.34
NPAS3-212ENST00000552696 UNC93B1Q9H1C4 597 aa6.67□□□□□ -1.34
NPAS3-212ENST00000552696 HMX1Q9NP08 348 aaPredicted RBP6.66□□□□□ -1.34
NPAS3-212ENST00000552696 ZNF697Q5TEC3 545 aa6.65□□□□□ -1.34
NPAS3-212ENST00000552696 NR6A1Q15406 480 aa6.64□□□□□ -1.35
NPAS3-212ENST00000552696 LINC01559Q495D7 138 aa6.64□□□□□ -1.35
NPAS3-212ENST00000552696 CD2BP2O95400 341 aaKnown RBP6.63□□□□□ -1.35
NPAS3-212ENST00000552696 ZNF598Q86UK7 904 aaKnown RBP6.63□□□□□ -1.35
NPAS3-212ENST00000552696 BANK1Q8NDB2 785 aa6.63□□□□□ -1.35
NPAS3-212ENST00000552696 EPS8L1Q8TE68 723 aa6.63□□□□□ -1.35
NPAS3-212ENST00000552696 SNRKQ9NRH2 765 aa6.63□□□□□ -1.35
NPAS3-212ENST00000552696 SKOR1P84550 965 aa6.62□□□□□ -1.35
NPAS3-212ENST00000552696 MTMR14Q8NCE2 650 aa6.62□□□□□ -1.35
NPAS3-212ENST00000552696 BAP1Q92560 729 aa6.62□□□□□ -1.35
NPAS3-212ENST00000552696 TRIM34Q9BYJ4 488 aa6.62□□□□□ -1.35
NPAS3-212ENST00000552696 WNT7BP56706 349 aa6.61□□□□□ -1.35
NPAS3-212ENST00000552696 SH3BP2P78314 561 aa6.61□□□□□ -1.35
NPAS3-212ENST00000552696 ZNF511Q8NB15 262 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms