RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 GPATCH8Q9UKJ3 1502 aaKnown RBP13.93□□□□□ -0.18
PRIM1-208ENST00000552590 TIAM1Q13009 1591 aa13.93□□□□□ -0.18
PRIM1-208ENST00000552590 ARHGAP23Q9P227 1491 aa13.93□□□□□ -0.18
PRIM1-208ENST00000552590 EID1Q9Y6B2 187 aa13.93□□□□□ -0.18
PRIM1-208ENST00000552590 LRP5O75197 1615 aa13.92□□□□□ -0.18
PRIM1-208ENST00000552590 CFAP65Q6ZU64 1925 aaKnown RBP13.92□□□□□ -0.18
PRIM1-208ENST00000552590 C8orf37Q96NL8 207 aa13.92□□□□□ -0.18
PRIM1-208ENST00000552590 PLEKHH2Q8IVE3 1493 aa13.91□□□□□ -0.18
PRIM1-208ENST00000552590 SLIT1O75093 1534 aa13.91□□□□□ -0.18
PRIM1-208ENST00000552590 C3orf67Q6ZVT6 689 aa13.91□□□□□ -0.18
PRIM1-208ENST00000552590 SLC26A8Q96RN1 970 aa13.91□□□□□ -0.18
PRIM1-208ENST00000552590 CFDP1Q9UEE9 299 aaPredicted RBP13.91□□□□□ -0.18
PRIM1-208ENST00000552590 ERVK-7P63135 1459 aa13.9□□□□□ -0.18
PRIM1-208ENST00000552590 YY1P25490 414 aa13.89□□□□□ -0.19
PRIM1-208ENST00000552590 NGLY1Q96IV0 654 aa13.89□□□□□ -0.19
PRIM1-208ENST00000552590 AHDC1Q5TGY3 1603 aaPredicted RBP13.88□□□□□ -0.19
PRIM1-208ENST00000552590 ARHGAP35Q9NRY4 1499 aa13.88□□□□□ -0.19
PRIM1-208ENST00000552590 CCDC125Q86Z20 511 aa13.87□□□□□ -0.19
PRIM1-208ENST00000552590 ZNF644Q9H582 1327 aaPredicted RBP13.87□□□□□ -0.19
PRIM1-208ENST00000552590 DIP2AQ14689 1571 aa13.86□□□□□ -0.19
PRIM1-208ENST00000552590 NKTRP30414 1462 aaKnown RBP13.86□□□□□ -0.19
PRIM1-208ENST00000552590 KDM5AP29375 1690 aaKnown RBP13.86□□□□□ -0.19
PRIM1-208ENST00000552590 ABCC3O15438 1527 aa13.85□□□□□ -0.19
PRIM1-208ENST00000552590 RTEL1-TNFRSF6BF6WH68 1400 aa13.85□□□□□ -0.19
PRIM1-208ENST00000552590 PDCD7Q8N8D1 485 aaKnown RBP13.84□□□□□ -0.19
PRIM1-208ENST00000552590 L3MBTL3Q96JM7 780 aaPredicted RBP13.83□□□□□ -0.2
PRIM1-208ENST00000552590 NWD1Q149M9 1564 aa13.83□□□□□ -0.2
PRIM1-208ENST00000552590 TMEM2Q9UHN6 1383 aa13.83□□□□□ -0.2
PRIM1-208ENST00000552590 CCDC18Q5T9S5 1454 aa13.82□□□□□ -0.2
PRIM1-208ENST00000552590 MBD5Q9P267 1494 aa13.82□□□□□ -0.2
PRIM1-208ENST00000552590 TET3O43151 1660 aa13.82□□□□□ -0.2
PRIM1-208ENST00000552590 DEFB132Q7Z7B7 95 aa13.81□□□□□ -0.2
PRIM1-208ENST00000552590 PSDA5PKW4 1024 aaPredicted RBP13.8□□□□□ -0.2
PRIM1-208ENST00000552590 CCNB3Q8WWL7 1395 aa13.8□□□□□ -0.2
PRIM1-208ENST00000552590 BRINP3Q76B58 766 aa13.8□□□□□ -0.2
PRIM1-208ENST00000552590 C14orf37Q86TY3 774 aa13.8□□□□□ -0.2
PRIM1-208ENST00000552590 ADAMTS2O95450 1211 aa13.79□□□□□ -0.2
PRIM1-208ENST00000552590 HRCP23327 699 aa13.79□□□□□ -0.2
PRIM1-208ENST00000552590 MAST1Q9Y2H9 1570 aa13.79□□□□□ -0.2
PRIM1-208ENST00000552590 CADPS2Q86UW7 1296 aa13.77□□□□□ -0.21
PRIM1-208ENST00000552590 BCANQ96GW7 911 aa13.77□□□□□ -0.21
PRIM1-208ENST00000552590 USP21Q9UK80 565 aa13.77□□□□□ -0.21
PRIM1-208ENST00000552590 TRPC5Q9UL62 973 aaPredicted RBP13.77□□□□□ -0.21
PRIM1-208ENST00000552590 PCDHB8Q9UN66 801 aa13.77□□□□□ -0.21
PRIM1-208ENST00000552590 NHSL1Q5SYE7 1610 aa13.77□□□□□ -0.21
PRIM1-208ENST00000552590 PYGBP11216 843 aa13.76□□□□□ -0.21
PRIM1-208ENST00000552590 ATF3P18847 181 aa13.76□□□□□ -0.21
PRIM1-208ENST00000552590 RNF166Q96A37 237 aaPredicted RBP13.76□□□□□ -0.21
PRIM1-208ENST00000552590 PIK3C2BO00750 1634 aa13.76□□□□□ -0.21
PRIM1-208ENST00000552590 CASKIN1Q8WXD9 1431 aa13.76□□□□□ -0.21
PRIM1-208ENST00000552590 SETD5Q9C0A6 1442 aa13.76□□□□□ -0.21
PRIM1-208ENST00000552590 CEP350Q5VT06 3117 aa13.76□□□□□ -0.21
PRIM1-208ENST00000552590 UBTFP17480 764 aaKnown RBP13.75□□□□□ -0.21
PRIM1-208ENST00000552590 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.75□□□□□ -0.21
PRIM1-208ENST00000552590 BLMP54132 1417 aaPredicted RBP13.74□□□□□ -0.21
PRIM1-208ENST00000552590 SENP3-EIF4A1A0A087X0R7 540 aa13.74□□□□□ -0.21
PRIM1-208ENST00000552590 LRRC59Q96AG4 307 aaKnown RBP13.74□□□□□ -0.21
PRIM1-208ENST00000552590 CAMSAP2Q08AD1 1489 aa13.73□□□□□ -0.21
PRIM1-208ENST00000552590 CHD2O14647 1828 aaKnown RBP13.73□□□□□ -0.21
PRIM1-208ENST00000552590 PNPLA6Q8IY17 1366 aa13.73□□□□□ -0.21
PRIM1-208ENST00000552590 CEP152O94986 1710 aa13.73□□□□□ -0.21
PRIM1-208ENST00000552590 C19orf44Q9H6X5 657 aa13.73□□□□□ -0.21
PRIM1-208ENST00000552590 EEA1Q15075 1411 aa13.72□□□□□ -0.21
PRIM1-208ENST00000552590 ATRNO75882 1429 aa13.71□□□□□ -0.21
PRIM1-208ENST00000552590 NCOA3Q9Y6Q9 1424 aa13.71□□□□□ -0.21
PRIM1-208ENST00000552590 BCL9LQ86UU0 1499 aa13.71□□□□□ -0.21
PRIM1-208ENST00000552590 EFCAB6Q5THR3 1501 aa13.71□□□□□ -0.21
PRIM1-208ENST00000552590 MKRN3Q13064 507 aaKnown RBP13.71□□□□□ -0.21
PRIM1-208ENST00000552590 DCAF8Q5TAQ9 597 aa13.71□□□□□ -0.21
PRIM1-208ENST00000552590 DDX17Q92841 729 aaKnown RBP13.71□□□□□ -0.21
PRIM1-208ENST00000552590 CCDC141Q6ZP82 1450 aa13.7□□□□□ -0.22
PRIM1-208ENST00000552590 ASXL1Q8IXJ9 1541 aa13.7□□□□□ -0.22
PRIM1-208ENST00000552590 UTRNP46939 3433 aa13.69□□□□□ -0.22
PRIM1-208ENST00000552590 GOLGA2Q08379 1002 aa13.68□□□□□ -0.22
PRIM1-208ENST00000552590 SF3B2Q13435 895 aaKnown RBP13.68□□□□□ -0.22
PRIM1-208ENST00000552590 FNBP4Q8N3X1 1017 aaPredicted RBP13.68□□□□□ -0.22
PRIM1-208ENST00000552590 MROH1Q8NDA8 1641 aa13.68□□□□□ -0.22
PRIM1-208ENST00000552590 IDI1Q13907 227 aa13.67□□□□□ -0.22
PRIM1-208ENST00000552590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.66□□□□□ -0.228e-7■□□□□ 8.8
PRIM1-208ENST00000552590 HOXB3P14651 431 aaPredicted RBP13.64□□□□□ -0.23
PRIM1-208ENST00000552590 ARHGAP31Q2M1Z3 1444 aa13.64□□□□□ -0.23
PRIM1-208ENST00000552590 HOXB1P14653 301 aaPredicted RBP13.63□□□□□ -0.23
PRIM1-208ENST00000552590 FYCO1Q9BQS8 1478 aa13.63□□□□□ -0.23
PRIM1-208ENST00000552590 ERBB3P21860 1342 aa13.62□□□□□ -0.23
PRIM1-208ENST00000552590 R3HDM1Q15032 1099 aaKnown RBP13.62□□□□□ -0.23
PRIM1-208ENST00000552590 GJD4Q96KN9 370 aaPredicted RBP13.62□□□□□ -0.23
PRIM1-208ENST00000552590 TSPY4P0CV99 314 aa13.61□□□□□ -0.23
PRIM1-208ENST00000552590 TSPY10P0CW01 314 aa13.61□□□□□ -0.23
PRIM1-208ENST00000552590 RSPH4AQ5TD94 716 aa13.61□□□□□ -0.23
PRIM1-208ENST00000552590 MTUS2Q5JR59 1369 aa13.61□□□□□ -0.23
PRIM1-208ENST00000552590 PLEKHG1Q9ULL1 1385 aa13.6□□□□□ -0.23
PRIM1-208ENST00000552590 BRWD3Q6RI45 1802 aa13.6□□□□□ -0.23
PRIM1-208ENST00000552590 ZNF710Q8N1W2 664 aa13.6□□□□□ -0.23
PRIM1-208ENST00000552590 TBX22Q9Y458 520 aa13.6□□□□□ -0.23
PRIM1-208ENST00000552590 MST1RQ04912 1400 aa13.6□□□□□ -0.23
PRIM1-208ENST00000552590 EIF2AK4Q9P2K8 1649 aaKnown RBP13.59□□□□□ -0.23
PRIM1-208ENST00000552590 PTCH1Q13635 1447 aa13.59□□□□□ -0.23
PRIM1-208ENST00000552590 ZNF784Q8NCA9 323 aaPredicted RBP13.59□□□□□ -0.23
PRIM1-208ENST00000552590 PPP1R15AO75807 674 aaPredicted RBP13.58□□□□□ -0.24
PRIM1-208ENST00000552590 UNC13BO14795 1591 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms