RNA–Protein interactions for RNA: ENST00000552573.6

TGFBR1-210, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-210ENST00000552573 LIAT1Q6ZQX7 453 aa5.02□□□□□ -1.61
TGFBR1-210ENST00000552573 SYMPKQ92797 1274 aaKnown RBP5.02□□□□□ -1.61
TGFBR1-210ENST00000552573 DXOO77932 396 aaKnown RBP5.01□□□□□ -1.61
TGFBR1-210ENST00000552573 FDX1P10109 184 aa5.01□□□□□ -1.61
TGFBR1-210ENST00000552573 USB1Q9BQ65 265 aaKnown RBP5.01□□□□□ -1.61
TGFBR1-210ENST00000552573 GPBP1L1Q9HC44 474 aaPredicted RBP5.01□□□□□ -1.61
TGFBR1-210ENST00000552573 SPTLC1O15269 473 aa5□□□□□ -1.61
TGFBR1-210ENST00000552573 GJA5P36382 358 aa5□□□□□ -1.61
TGFBR1-210ENST00000552573 SLC19A1P41440 591 aa5□□□□□ -1.61
TGFBR1-210ENST00000552573 RSBN1LQ6PCB5 846 aaPredicted RBP5□□□□□ -1.61
TGFBR1-210ENST00000552573 TRIM67Q6ZTA4 783 aa5□□□□□ -1.61
TGFBR1-210ENST00000552573 FCF1Q9Y324 198 aaKnown RBP5□□□□□ -1.61
TGFBR1-210ENST00000552573 MYSM1Q5VVJ2 828 aa4.99□□□□□ -1.61
TGFBR1-210ENST00000552573 SPRYD7Q5W111 196 aa4.99□□□□□ -1.61
TGFBR1-210ENST00000552573 RETREG3Q86VR2 466 aa4.99□□□□□ -1.61
TGFBR1-210ENST00000552573 IRX2Q9BZI1 471 aaPredicted RBP4.99□□□□□ -1.61
TGFBR1-210ENST00000552573 KDM4CQ9H3R0 1056 aa4.99□□□□□ -1.61
TGFBR1-210ENST00000552573 PCDHB15Q9Y5E8 787 aa4.99□□□□□ -1.61
TGFBR1-210ENST00000552573 LIMD1Q9UGP4 676 aa4.98□□□□□ -1.61
TGFBR1-210ENST00000552573 PLEKHG3A1L390 1219 aa4.97□□□□□ -1.61
TGFBR1-210ENST00000552573 C6orf229H3BNL8 230 aa4.97□□□□□ -1.61
TGFBR1-210ENST00000552573 JUNDP17535 347 aa4.97□□□□□ -1.61
TGFBR1-210ENST00000552573 DIXDC1Q155Q3 683 aa4.97□□□□□ -1.61
TGFBR1-210ENST00000552573 TPRNQ4KMQ1 711 aa4.97□□□□□ -1.61
TGFBR1-210ENST00000552573 RIC3Q7Z5B4 369 aa4.97□□□□□ -1.61
TGFBR1-210ENST00000552573 ZNF598Q86UK7 904 aaKnown RBP4.97□□□□□ -1.61
TGFBR1-210ENST00000552573 FAM117AQ9C073 453 aa4.97□□□□□ -1.61
TGFBR1-210ENST00000552573 LCE2BO14633 110 aa4.96□□□□□ -1.62
TGFBR1-210ENST00000552573 GDF9O60383 454 aa4.96□□□□□ -1.62
TGFBR1-210ENST00000552573 HRCP23327 699 aa4.96□□□□□ -1.62
TGFBR1-210ENST00000552573 RPIAP49247 311 aa4.96□□□□□ -1.62
TGFBR1-210ENST00000552573 MTMR2Q13614 643 aa4.96□□□□□ -1.62
TGFBR1-210ENST00000552573 TUSC1Q2TAM9 212 aa4.96□□□□□ -1.62
TGFBR1-210ENST00000552573 CFAP99D6REC4 459 aa4.95□□□□□ -1.62
TGFBR1-210ENST00000552573 LILRB3O75022 631 aa4.95□□□□□ -1.62
TGFBR1-210ENST00000552573 QPCTQ16769 361 aa4.95□□□□□ -1.62
TGFBR1-210ENST00000552573 ZNF697Q5TEC3 545 aa4.95□□□□□ -1.62
TGFBR1-210ENST00000552573 PRPF38BQ5VTL8 546 aaKnown RBP4.95□□□□□ -1.62
TGFBR1-210ENST00000552573 FBXO31Q5XUX0 539 aaPredicted RBP4.95□□□□□ -1.62
TGFBR1-210ENST00000552573 PRR7Q8TB68 274 aa4.95□□□□□ -1.62
TGFBR1-210ENST00000552573 CABLES1Q8TDN4 633 aa4.95□□□□□ -1.62
TGFBR1-210ENST00000552573 PKD2L1Q9P0L9 805 aa4.95□□□□□ -1.62
TGFBR1-210ENST00000552573 SPDYE5A6NIY4 337 aa4.94□□□□□ -1.62
TGFBR1-210ENST00000552573 GFRA3O60609 400 aa4.94□□□□□ -1.62
TGFBR1-210ENST00000552573 PRR20EP86478 221 aa4.94□□□□□ -1.62
TGFBR1-210ENST00000552573 PRR20CP86479 221 aa4.94□□□□□ -1.62
TGFBR1-210ENST00000552573 PRR20DP86480 221 aa4.94□□□□□ -1.62
TGFBR1-210ENST00000552573 PRR20BP86481 221 aa4.94□□□□□ -1.62
TGFBR1-210ENST00000552573 PRR20AP86496 221 aa4.94□□□□□ -1.62
TGFBR1-210ENST00000552573 DESI1Q6ICB0 168 aa4.94□□□□□ -1.62
TGFBR1-210ENST00000552573 PTCRAQ6ISU1 281 aaPredicted RBP4.94□□□□□ -1.62
TGFBR1-210ENST00000552573 PDZRN3Q9UPQ7 1066 aa4.94□□□□□ -1.62
TGFBR1-210ENST00000552573 NRG2O14511 850 aaPredicted RBP4.93□□□□□ -1.62
TGFBR1-210ENST00000552573 CLK2P49760 499 aaKnown RBP4.93□□□□□ -1.62
TGFBR1-210ENST00000552573 BRPF1P55201 1214 aaPredicted RBP4.93□□□□□ -1.62
TGFBR1-210ENST00000552573 TRIM32Q13049 653 aa4.93□□□□□ -1.62
TGFBR1-210ENST00000552573 SH3D19Q5HYK7 790 aa4.93□□□□□ -1.62
TGFBR1-210ENST00000552573 RTL5Q5HYW3 569 aaPredicted RBP4.93□□□□□ -1.62
TGFBR1-210ENST00000552573 NUDT12Q9BQG2 462 aa4.93□□□□□ -1.62
TGFBR1-210ENST00000552573 RSPH6AQ9H0K4 717 aa4.93□□□□□ -1.62
TGFBR1-210ENST00000552573 ZBTB3Q9H5J0 574 aa4.93□□□□□ -1.62
TGFBR1-210ENST00000552573 POLR3EQ9NVU0 708 aa4.93□□□□□ -1.62
TGFBR1-210ENST00000552573 LAPTM4AQ15012 233 aa4.92□□□□□ -1.62
TGFBR1-210ENST00000552573 SKIV2LQ15477 1246 aaKnown RBP4.92□□□□□ -1.62
TGFBR1-210ENST00000552573 PTPRNQ16849 979 aa4.92□□□□□ -1.62
TGFBR1-210ENST00000552573 CSPP1Q1MSJ5 1256 aa4.92□□□□□ -1.62
TGFBR1-210ENST00000552573 LYPD8Q6UX82 237 aa4.92□□□□□ -1.62
TGFBR1-210ENST00000552573 DDRGK1Q96HY6 314 aa4.92□□□□□ -1.62
TGFBR1-210ENST00000552573 EVA1BQ9NVM1 165 aa4.92□□□□□ -1.62
TGFBR1-210ENST00000552573 TNFRSF10AO00220 468 aa4.91□□□□□ -1.62
TGFBR1-210ENST00000552573 PER1O15534 1290 aaPredicted RBP4.91□□□□□ -1.62
TGFBR1-210ENST00000552573 CD2BP2O95400 341 aaKnown RBP4.91□□□□□ -1.62
TGFBR1-210ENST00000552573 CCNYL3P0C7X3 344 aa4.91□□□□□ -1.62
TGFBR1-210ENST00000552573 PRKCSHP14314 528 aaPredicted RBP4.91□□□□□ -1.62
TGFBR1-210ENST00000552573 SKOR1P84550 965 aa4.91□□□□□ -1.62
TGFBR1-210ENST00000552573 NEUROD2Q15784 382 aa4.91□□□□□ -1.62
TGFBR1-210ENST00000552573 CCDC24Q8N4L8 307 aa4.91□□□□□ -1.62
TGFBR1-210ENST00000552573 PROCA1Q8NCQ7 364 aaPredicted RBP4.91□□□□□ -1.62
TGFBR1-210ENST00000552573 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.91□□□□□ -1.62
TGFBR1-210ENST00000552573 ZBTB24O43167 697 aaPredicted RBP4.9□□□□□ -1.63
TGFBR1-210ENST00000552573 F12P00748 615 aaPredicted RBP4.9□□□□□ -1.63
TGFBR1-210ENST00000552573 KCNH2Q12809 1159 aa4.9□□□□□ -1.63
TGFBR1-210ENST00000552573 FOXC1Q12948 553 aa4.9□□□□□ -1.63
TGFBR1-210ENST00000552573 TOR4AQ9NXH8 423 aa4.9□□□□□ -1.63
TGFBR1-210ENST00000552573 WNT7AO00755 349 aa4.89□□□□□ -1.63
TGFBR1-210ENST00000552573 Q6ZNB5 142 aa4.89□□□□□ -1.63
TGFBR1-210ENST00000552573 NUTM2BA6NNL0 878 aaPredicted RBP4.88□□□□□ -1.63
TGFBR1-210ENST00000552573 NUTM2EB1AL46 878 aaPredicted RBP4.88□□□□□ -1.63
TGFBR1-210ENST00000552573 WNT7BP56706 349 aa4.88□□□□□ -1.63
TGFBR1-210ENST00000552573 NUTM2DQ5VT03 806 aaPredicted RBP4.88□□□□□ -1.63
TGFBR1-210ENST00000552573 PPP2R2DQ66LE6 453 aa4.88□□□□□ -1.63
TGFBR1-210ENST00000552573 NUTM2AQ8IVF1 878 aaPredicted RBP4.88□□□□□ -1.63
TGFBR1-210ENST00000552573 UNC93B1Q9H1C4 597 aa4.88□□□□□ -1.63
TGFBR1-210ENST00000552573 MAP10Q9P2G4 905 aa4.88□□□□□ -1.63
TGFBR1-210ENST00000552573 SH3BP2P78314 561 aa4.87□□□□□ -1.63
TGFBR1-210ENST00000552573 RC3H1Q5TC82 1133 aaKnown RBP4.87□□□□□ -1.63
TGFBR1-210ENST00000552573 TRAF7Q6Q0C0 670 aa4.87□□□□□ -1.63
TGFBR1-210ENST00000552573 IL27Q8NEV9 243 aa4.87□□□□□ -1.63
TGFBR1-210ENST00000552573 MRGPRX2Q96LB1 330 aa4.87□□□□□ -1.63
TGFBR1-210ENST00000552573 GOPCQ9HD26 462 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms