RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 NGLY1Q96IV0 654 aa6.82□□□□□ -1.32
TMEM106C-220ENST00000552561 C19orf44Q9H6X5 657 aa6.82□□□□□ -1.32
TMEM106C-220ENST00000552561 LAMC1P11047 1609 aa6.82□□□□□ -1.32
TMEM106C-220ENST00000552561 NAIPQ13075 1403 aa6.82□□□□□ -1.32
TMEM106C-220ENST00000552561 PTPRUQ92729 1446 aa6.82□□□□□ -1.32
TMEM106C-220ENST00000552561 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.81□□□□□ -1.32
TMEM106C-220ENST00000552561 FXR2P51116 673 aaKnown RBP eCLIP6.81□□□□□ -1.32
TMEM106C-220ENST00000552561 CADPS2Q86UW7 1296 aa6.81□□□□□ -1.32
TMEM106C-220ENST00000552561 HFM1A2PYH4 1435 aa6.81□□□□□ -1.32
TMEM106C-220ENST00000552561 NEXMIFQ5QGS0 1516 aa6.81□□□□□ -1.32
TMEM106C-220ENST00000552561 RGS12O14924 1447 aa6.8□□□□□ -1.32
TMEM106C-220ENST00000552561 PTCH1Q13635 1447 aa6.8□□□□□ -1.32
TMEM106C-220ENST00000552561 SETD5Q9C0A6 1442 aa6.8□□□□□ -1.32
TMEM106C-220ENST00000552561 YY1P25490 414 aa6.79□□□□□ -1.32
TMEM106C-220ENST00000552561 RBM6P78332 1123 aaKnown RBP6.79□□□□□ -1.32
TMEM106C-220ENST00000552561 CCDC125Q86Z20 511 aa6.79□□□□□ -1.32
TMEM106C-220ENST00000552561 NHSL1Q5SYE7 1610 aa6.79□□□□□ -1.32
TMEM106C-220ENST00000552561 RPGRIP1LQ68CZ1 1315 aa6.78□□□□□ -1.32
TMEM106C-220ENST00000552561 MST1RQ04912 1400 aa6.78□□□□□ -1.32
TMEM106C-220ENST00000552561 ADGRL3Q9HAR2 1447 aa6.78□□□□□ -1.32
TMEM106C-220ENST00000552561 AMOTL2Q9Y2J4 779 aa6.78□□□□□ -1.32
TMEM106C-220ENST00000552561 LRP6O75581 1613 aa6.78□□□□□ -1.32
TMEM106C-220ENST00000552561 CLTCL1P53675 1640 aa6.78□□□□□ -1.32
TMEM106C-220ENST00000552561 ASXL1Q8IXJ9 1541 aa6.77□□□□□ -1.33
TMEM106C-220ENST00000552561 PPP1R15AO75807 674 aaPredicted RBP6.77□□□□□ -1.33
TMEM106C-220ENST00000552561 SF3B2Q13435 895 aaKnown RBP6.77□□□□□ -1.33
TMEM106C-220ENST00000552561 METP08581 1390 aa6.77□□□□□ -1.33
TMEM106C-220ENST00000552561 ACIN1Q9UKV3 1341 aaKnown RBP6.76□□□□□ -1.33
TMEM106C-220ENST00000552561 TECPR2O15040 1411 aa6.76□□□□□ -1.33
TMEM106C-220ENST00000552561 SENP3-EIF4A1A0A087X0R7 540 aa6.76□□□□□ -1.33
TMEM106C-220ENST00000552561 SPDYE2BA6NHP3 402 aa6.76□□□□□ -1.33
TMEM106C-220ENST00000552561 SPDYE6P0CI01 402 aa6.76□□□□□ -1.33
TMEM106C-220ENST00000552561 SPDYE2Q495Y8 402 aa6.76□□□□□ -1.33
TMEM106C-220ENST00000552561 BRINP3Q76B58 766 aa6.76□□□□□ -1.33
TMEM106C-220ENST00000552561 KIF1BO60333 1816 aa6.76□□□□□ -1.33
TMEM106C-220ENST00000552561 AFF2P51816 1311 aa6.76□□□□□ -1.33
TMEM106C-220ENST00000552561 EP400Q96L91 3159 aa6.74□□□□□ -1.33
TMEM106C-220ENST00000552561 NALCNQ8IZF0 1738 aa6.74□□□□□ -1.33
TMEM106C-220ENST00000552561 VGFO15240 615 aaPredicted RBP6.74□□□□□ -1.33
TMEM106C-220ENST00000552561 ATF3P18847 181 aa6.74□□□□□ -1.33
TMEM106C-220ENST00000552561 PPLO60437 1756 aa6.74□□□□□ -1.33
TMEM106C-220ENST00000552561 SPATA31E1Q6ZUB1 1445 aa6.74□□□□□ -1.33
TMEM106C-220ENST00000552561 SOS2Q07890 1332 aaPredicted RBP6.74□□□□□ -1.33
TMEM106C-220ENST00000552561 CDC42BPGQ6DT37 1551 aa6.74□□□□□ -1.33
TMEM106C-220ENST00000552561 C1orf167Q5SNV9 1468 aa6.73□□□□□ -1.33
TMEM106C-220ENST00000552561 BCANQ96GW7 911 aa6.73□□□□□ -1.33
TMEM106C-220ENST00000552561 IFT172Q9UG01 1749 aa6.73□□□□□ -1.33
TMEM106C-220ENST00000552561 COL22A1Q8NFW1 1626 aaPredicted RBP6.72□□□□□ -1.33
TMEM106C-220ENST00000552561 PNPLA6Q8IY17 1366 aa6.72□□□□□ -1.33
TMEM106C-220ENST00000552561 ROBO2Q9HCK4 1378 aa6.72□□□□□ -1.33
TMEM106C-220ENST00000552561 CHGAP10645 457 aaKnown RBP6.72□□□□□ -1.33
TMEM106C-220ENST00000552561 C14orf37Q86TY3 774 aa6.72□□□□□ -1.33
TMEM106C-220ENST00000552561 LRRC59Q96AG4 307 aaKnown RBP6.72□□□□□ -1.33
TMEM106C-220ENST00000552561 SIRT1Q96EB6 747 aa6.72□□□□□ -1.33
TMEM106C-220ENST00000552561 C8orf37Q96NL8 207 aa6.72□□□□□ -1.33
TMEM106C-220ENST00000552561 QTRT2Q9H974 415 aaKnown RBP6.72□□□□□ -1.33
TMEM106C-220ENST00000552561 NRXN1Q9ULB1 1477 aa6.72□□□□□ -1.33
TMEM106C-220ENST00000552561 ABCC11Q96J66 1382 aa6.71□□□□□ -1.33
TMEM106C-220ENST00000552561 ANKRD30BQ9BXX2 1392 aa6.71□□□□□ -1.33
TMEM106C-220ENST00000552561 KNDC1Q76NI1 1749 aa6.71□□□□□ -1.34
TMEM106C-220ENST00000552561 PIK3C2GO75747 1445 aa6.7□□□□□ -1.34
TMEM106C-220ENST00000552561 BLMP54132 1417 aaPredicted RBP6.7□□□□□ -1.34
TMEM106C-220ENST00000552561 MKRN4PQ13434 485 aaPredicted RBP6.7□□□□□ -1.34
TMEM106C-220ENST00000552561 MYOM2P54296 1465 aa6.69□□□□□ -1.34
TMEM106C-220ENST00000552561 GABBR2O75899 941 aa6.69□□□□□ -1.34
TMEM106C-220ENST00000552561 ZNF326Q5BKZ1 582 aaKnown RBP6.69□□□□□ -1.34
TMEM106C-220ENST00000552561 FNBP4Q8N3X1 1017 aaPredicted RBP6.69□□□□□ -1.34
TMEM106C-220ENST00000552561 TRPC5Q9UL62 973 aaPredicted RBP6.69□□□□□ -1.34
TMEM106C-220ENST00000552561 LRPPRCP42704 1394 aaKnown RBP6.69□□□□□ -1.34
TMEM106C-220ENST00000552561 CCDC144AA2RUR9 1427 aa6.68□□□□□ -1.34
TMEM106C-220ENST00000552561 PXDNQ92626 1479 aa6.68□□□□□ -1.34
TMEM106C-220ENST00000552561 CLEC11AQ9Y240 323 aa6.68□□□□□ -1.34
TMEM106C-220ENST00000552561 ITGAEP38570 1179 aa6.67□□□□□ -1.34
TMEM106C-220ENST00000552561 SPDYE1Q8NFV5 336 aaPredicted RBP6.67□□□□□ -1.34
TMEM106C-220ENST00000552561 STAC3Q96MF2 364 aa6.67□□□□□ -1.34
TMEM106C-220ENST00000552561 DLC1Q96QB1 1528 aa6.66□□□□□ -1.34
TMEM106C-220ENST00000552561 PRKAR2AP13861 404 aaKnown RBP6.66□□□□□ -1.34
TMEM106C-220ENST00000552561 HRCP23327 699 aa6.66□□□□□ -1.34
TMEM106C-220ENST00000552561 MPHOSPH9Q99550 1183 aa6.66□□□□□ -1.34
TMEM106C-220ENST00000552561 ZNF692Q9BU19 519 aaPredicted RBP6.66□□□□□ -1.34
TMEM106C-220ENST00000552561 SSUH2Q9Y2M2 353 aa6.66□□□□□ -1.34
TMEM106C-220ENST00000552561 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.66□□□□□ -1.34
TMEM106C-220ENST00000552561 NPHP3Q7Z494 1330 aa6.66□□□□□ -1.34
TMEM106C-220ENST00000552561 ADGRF5Q8IZF2 1346 aa6.66□□□□□ -1.34
TMEM106C-220ENST00000552561 ATRNO75882 1429 aa6.66□□□□□ -1.34
TMEM106C-220ENST00000552561 ADGRB2O60241 1585 aa6.65□□□□□ -1.34
TMEM106C-220ENST00000552561 KIF1AQ12756 1690 aa6.65□□□□□ -1.34
TMEM106C-220ENST00000552561 FMN2Q9NZ56 1722 aa6.65□□□□□ -1.34
TMEM106C-220ENST00000552561 ORAI2Q96SN7 254 aa6.65□□□□□ -1.34
TMEM106C-220ENST00000552561 C14orf93Q9H972 538 aaKnown RBP6.65□□□□□ -1.34
TMEM106C-220ENST00000552561 USP21Q9UK80 565 aa6.65□□□□□ -1.34
TMEM106C-220ENST00000552561 YTHDC2Q9H6S0 1430 aaKnown RBP6.65□□□□□ -1.35
TMEM106C-220ENST00000552561 BCL9LQ86UU0 1499 aa6.65□□□□□ -1.35
TMEM106C-220ENST00000552561 ADGRB1O14514 1584 aa6.65□□□□□ -1.35
TMEM106C-220ENST00000552561 MARF1Q9Y4F3 1742 aaKnown RBP6.64□□□□□ -1.35
TMEM106C-220ENST00000552561 BAG6P46379 1132 aa6.64□□□□□ -1.35
TMEM106C-220ENST00000552561 PPP1R1BQ9UD71 204 aaPredicted RBP6.64□□□□□ -1.35
TMEM106C-220ENST00000552561 SLIT2O94813 1529 aa6.64□□□□□ -1.35
TMEM106C-220ENST00000552561 PSDA5PKW4 1024 aaPredicted RBP6.63□□□□□ -1.35
TMEM106C-220ENST00000552561 ANKARQ7Z5J8 1434 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms