RNA–Protein interactions for RNA: ENST00000552487.1

ATF1-204, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-204ENST00000552487 NALCNQ8IZF0 1738 aa16.19■□□□□ 0.18
ATF1-204ENST00000552487 AFF2P51816 1311 aa16.19■□□□□ 0.18
ATF1-204ENST00000552487 ABCC11Q96J66 1382 aa16.18■□□□□ 0.18
ATF1-204ENST00000552487 LRP6O75581 1613 aa16.18■□□□□ 0.18
ATF1-204ENST00000552487 PIK3C2GO75747 1445 aa16.18■□□□□ 0.18
ATF1-204ENST00000552487 PNPLA6Q8IY17 1366 aa16.17■□□□□ 0.18
ATF1-204ENST00000552487 NUTM2FA1L443 756 aa16.17■□□□□ 0.18
ATF1-204ENST00000552487 HAP1P54257 671 aaPredicted RBP16.17■□□□□ 0.18
ATF1-204ENST00000552487 WAPLQ7Z5K2 1190 aa16.17■□□□□ 0.18
ATF1-204ENST00000552487 YTHDC2Q9H6S0 1430 aaKnown RBP16.16■□□□□ 0.18
ATF1-204ENST00000552487 TECPR2O15040 1411 aa16.15■□□□□ 0.18
ATF1-204ENST00000552487 CDC42BPGQ6DT37 1551 aa16.15■□□□□ 0.18
ATF1-204ENST00000552487 STAC3Q96MF2 364 aa16.15■□□□□ 0.18
ATF1-204ENST00000552487 NHSL1Q5SYE7 1610 aa16.15■□□□□ 0.18
ATF1-204ENST00000552487 SOS2Q07890 1332 aaPredicted RBP16.15■□□□□ 0.18
ATF1-204ENST00000552487 FOXO3O43524 673 aa16.14■□□□□ 0.17
ATF1-204ENST00000552487 C14orf93Q9H972 538 aaKnown RBP16.14■□□□□ 0.17
ATF1-204ENST00000552487 KDM2AQ9Y2K7 1162 aa16.14■□□□□ 0.17
ATF1-204ENST00000552487 HRCP23327 699 aa16.13■□□□□ 0.17
ATF1-204ENST00000552487 PSME1Q06323 249 aa16.13■□□□□ 0.17
ATF1-204ENST00000552487 SAFB2Q14151 953 aaKnown RBP eCLIP16.13■□□□□ 0.17
ATF1-204ENST00000552487 CFAP70Q5T0N1 1121 aa16.13■□□□□ 0.17
ATF1-204ENST00000552487 MYOM2P54296 1465 aa16.13■□□□□ 0.17
ATF1-204ENST00000552487 SETD1AO15047 1707 aaKnown RBP16.12■□□□□ 0.17
ATF1-204ENST00000552487 DCAF11Q8TEB1 546 aa16.12■□□□□ 0.17
ATF1-204ENST00000552487 SIRT1Q96EB6 747 aa16.12■□□□□ 0.17
ATF1-204ENST00000552487 PRAM1Q96QH2 718 aa16.12■□□□□ 0.17
ATF1-204ENST00000552487 QTRT2Q9H974 415 aaKnown RBP16.12■□□□□ 0.17
ATF1-204ENST00000552487 RBM6P78332 1123 aaKnown RBP16.11■□□□□ 0.17
ATF1-204ENST00000552487 XPCQ01831 940 aaPredicted RBP16.11■□□□□ 0.17
ATF1-204ENST00000552487 LAMC1P11047 1609 aa16.1■□□□□ 0.17
ATF1-204ENST00000552487 LMOD2Q6P5Q4 547 aa16.1■□□□□ 0.17
ATF1-204ENST00000552487 USP21Q9UK80 565 aa16.1■□□□□ 0.17
ATF1-204ENST00000552487 EIF3AQ14152 1382 aaKnown RBP16.1■□□□□ 0.17
ATF1-204ENST00000552487 TRPC5Q9UL62 973 aaPredicted RBP16.09■□□□□ 0.17
ATF1-204ENST00000552487 PHF8Q9UPP1 1060 aa16.08■□□□□ 0.16
ATF1-204ENST00000552487 PLEKHH1Q9ULM0 1364 aa16.08■□□□□ 0.16
ATF1-204ENST00000552487 TRAK1Q9UPV9 953 aa16.07■□□□□ 0.16
ATF1-204ENST00000552487 IFT172Q9UG01 1749 aa16.06■□□□□ 0.16
ATF1-204ENST00000552487 CDK12Q9NYV4 1490 aaPredicted RBP16.06■□□□□ 0.16
ATF1-204ENST00000552487 KRT28Q7Z3Y7 464 aa16.06■□□□□ 0.16
ATF1-204ENST00000552487 KNDC1Q76NI1 1749 aa16.05■□□□□ 0.16
ATF1-204ENST00000552487 NRXN1Q9ULB1 1477 aa16.04■□□□□ 0.16
ATF1-204ENST00000552487 PLEKHG5O94827 1062 aa16.04■□□□□ 0.16
ATF1-204ENST00000552487 GPRASP1Q5JY77 1395 aa16.03■□□□□ 0.16
ATF1-204ENST00000552487 KIF1AQ12756 1690 aa16.02■□□□□ 0.16
ATF1-204ENST00000552487 MINK1Q8N4C8 1332 aaPredicted RBP16.02■□□□□ 0.16
ATF1-204ENST00000552487 HIRIP3Q9BW71 556 aaPredicted RBP16.02■□□□□ 0.16
ATF1-204ENST00000552487 PXDNQ92626 1479 aa16.02■□□□□ 0.15
ATF1-204ENST00000552487 ARHGEF10O15013 1369 aa16.01■□□□□ 0.15
ATF1-204ENST00000552487 SPATA31A3Q5VYP0 1347 aa16.01■□□□□ 0.15
ATF1-204ENST00000552487 ANKARQ7Z5J8 1434 aa16.01■□□□□ 0.15
ATF1-204ENST00000552487 DLC1Q96QB1 1528 aa16■□□□□ 0.15
ATF1-204ENST00000552487 FNBP4Q8N3X1 1017 aaPredicted RBP16■□□□□ 0.15
ATF1-204ENST00000552487 NGDNQ8NEJ9 315 aaKnown RBP16■□□□□ 0.15
ATF1-204ENST00000552487 UPF1Q92900 1129 aaKnown RBP eCLIP16■□□□□ 0.15
ATF1-204ENST00000552487 CCDC9Q9Y3X0 531 aaKnown RBP16■□□□□ 0.15
ATF1-204ENST00000552487 ATAD2Q6PL18 1390 aa16■□□□□ 0.15
ATF1-204ENST00000552487 PMFBP1Q8TBY8 1022 aa15.99■□□□□ 0.15
ATF1-204ENST00000552487 TNS3Q68CZ2 1445 aa15.99■□□□□ 0.15
ATF1-204ENST00000552487 FMN2Q9NZ56 1722 aa15.98■□□□□ 0.15
ATF1-204ENST00000552487 RGS12O14924 1447 aa15.97■□□□□ 0.15
ATF1-204ENST00000552487 A0A0G2JS52 829 aa15.97■□□□□ 0.15
ATF1-204ENST00000552487 PAK3O75914 559 aaPredicted RBP15.97■□□□□ 0.15
ATF1-204ENST00000552487 MYT1Q01538 1121 aa15.97■□□□□ 0.15
ATF1-204ENST00000552487 SBNO1A3KN83 1393 aa15.97■□□□□ 0.15
ATF1-204ENST00000552487 WASLO00401 505 aaPredicted RBP15.96■□□□□ 0.15
ATF1-204ENST00000552487 UNC5CLQ8IV45 518 aa15.96■□□□□ 0.15
ATF1-204ENST00000552487 COL22A1Q8NFW1 1626 aaPredicted RBP15.96■□□□□ 0.15
ATF1-204ENST00000552487 GJD4Q96KN9 370 aaPredicted RBP15.94■□□□□ 0.14
ATF1-204ENST00000552487 ATRNO75882 1429 aa15.94■□□□□ 0.14
ATF1-204ENST00000552487 ADGRB1O14514 1584 aa15.92■□□□□ 0.14
ATF1-204ENST00000552487 CABLES1Q8TDN4 633 aa15.92■□□□□ 0.14
ATF1-204ENST00000552487 TULP4Q9NRJ4 1543 aa15.91■□□□□ 0.14
ATF1-204ENST00000552487 SF3B2Q13435 895 aaKnown RBP15.91■□□□□ 0.14
ATF1-204ENST00000552487 ADGRB2O60241 1585 aa15.91■□□□□ 0.14
ATF1-204ENST00000552487 SRPK2P78362 688 aaKnown RBP15.9■□□□□ 0.14
ATF1-204ENST00000552487 CCDC125Q86Z20 511 aa15.89■□□□□ 0.13
ATF1-204ENST00000552487 NUDT16Q96DE0 195 aaKnown RBP15.89■□□□□ 0.13
ATF1-204ENST00000552487 CDK19Q9BWU1 502 aa15.88■□□□□ 0.13
ATF1-204ENST00000552487 BCL9LQ86UU0 1499 aa15.88■□□□□ 0.13
ATF1-204ENST00000552487 NEUROD1Q13562 356 aa15.87■□□□□ 0.13
ATF1-204ENST00000552487 PRDM11Q9NQV5 511 aa15.87■□□□□ 0.13
ATF1-204ENST00000552487 USP32Q8NFA0 1604 aa15.86■□□□□ 0.13
ATF1-204ENST00000552487 VPS72Q15906 364 aa15.86■□□□□ 0.13
ATF1-204ENST00000552487 CCDC61Q9Y6R9 512 aa15.86■□□□□ 0.13
ATF1-204ENST00000552487 CENPJQ9HC77 1338 aaPredicted RBP15.86■□□□□ 0.13
ATF1-204ENST00000552487 PRR36Q9H6K5 1346 aa15.85■□□□□ 0.13
ATF1-204ENST00000552487 RALGAPBQ86X10 1494 aa15.84■□□□□ 0.13
ATF1-204ENST00000552487 SLIT2O94813 1529 aa15.84■□□□□ 0.13
ATF1-204ENST00000552487 BTG4Q9NY30 223 aa15.84■□□□□ 0.13
ATF1-204ENST00000552487 SEPT12Q8IYM1 358 aa15.83■□□□□ 0.12
ATF1-204ENST00000552487 ZRANB1Q9UGI0 708 aa15.83■□□□□ 0.12
ATF1-204ENST00000552487 FAM83GA6ND36 823 aa15.82■□□□□ 0.12
ATF1-204ENST00000552487 MARF1Q9Y4F3 1742 aaKnown RBP15.82■□□□□ 0.12
ATF1-204ENST00000552487 ROCK2O75116 1388 aaKnown RBP15.81■□□□□ 0.12
ATF1-204ENST00000552487 ATP7BP35670 1465 aa15.81■□□□□ 0.12
ATF1-204ENST00000552487 EVA1CP58658 441 aa15.81■□□□□ 0.12
ATF1-204ENST00000552487 NBPF1Q3BBV0 1214 aa15.81■□□□□ 0.12
ATF1-204ENST00000552487 ABTB2Q8N961 1025 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms