RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 MSS51Q4VC12 460 aa12.35□□□□□ -0.43
LETMD1-233ENST00000552433 GIGYF2Q6Y7W6 1299 aaKnown RBP12.35□□□□□ -0.43
LETMD1-233ENST00000552433 TRAF7Q6Q0C0 670 aa12.34□□□□□ -0.43
LETMD1-233ENST00000552433 USB1Q9BQ65 265 aaKnown RBP12.34□□□□□ -0.43
LETMD1-233ENST00000552433 TNFRSF10AO00220 468 aa12.33□□□□□ -0.44
LETMD1-233ENST00000552433 SPIRE2Q8WWL2 714 aa12.32□□□□□ -0.44
LETMD1-233ENST00000552433 AK7Q96M32 723 aa12.32□□□□□ -0.44
LETMD1-233ENST00000552433 NDUFV2P19404 249 aa12.31□□□□□ -0.44
LETMD1-233ENST00000552433 FOXC1Q12948 553 aa12.31□□□□□ -0.44
LETMD1-233ENST00000552433 GDF9O60383 454 aa12.3□□□□□ -0.44
LETMD1-233ENST00000552433 PARP9Q8IXQ6 854 aa12.3□□□□□ -0.44
LETMD1-233ENST00000552433 RPIAP49247 311 aa12.29□□□□□ -0.44
LETMD1-233ENST00000552433 BEGAINQ9BUH8 593 aa12.29□□□□□ -0.44
LETMD1-233ENST00000552433 SLC24A3Q9HC58 644 aa12.29□□□□□ -0.44
LETMD1-233ENST00000552433 PCDHGC3Q9UN70 934 aa12.29□□□□□ -0.44
LETMD1-233ENST00000552433 CD2BP2O95400 341 aaKnown RBP12.28□□□□□ -0.44
LETMD1-233ENST00000552433 FDX1P10109 184 aa12.28□□□□□ -0.44
LETMD1-233ENST00000552433 MMP16P51512 607 aa12.28□□□□□ -0.44
LETMD1-233ENST00000552433 MOXD2PA6NHM9 499 aa12.27□□□□□ -0.45
LETMD1-233ENST00000552433 ZBTB24O43167 697 aaPredicted RBP12.27□□□□□ -0.45
LETMD1-233ENST00000552433 CCDC24Q8N4L8 307 aa12.27□□□□□ -0.45
LETMD1-233ENST00000552433 DXOO77932 396 aaKnown RBP12.26□□□□□ -0.45
LETMD1-233ENST00000552433 MS4A1P11836 297 aa12.26□□□□□ -0.45
LETMD1-233ENST00000552433 PRR20EP86478 221 aa12.26□□□□□ -0.45
LETMD1-233ENST00000552433 PRR20CP86479 221 aa12.26□□□□□ -0.45
LETMD1-233ENST00000552433 PRR20DP86480 221 aa12.26□□□□□ -0.45
LETMD1-233ENST00000552433 PRR20BP86481 221 aa12.26□□□□□ -0.45
LETMD1-233ENST00000552433 PRR20AP86496 221 aa12.26□□□□□ -0.45
LETMD1-233ENST00000552433 PKD2L1Q9P0L9 805 aa12.26□□□□□ -0.45
LETMD1-233ENST00000552433 C6orf229H3BNL8 230 aa12.25□□□□□ -0.45
LETMD1-233ENST00000552433 PDE4DQ08499 809 aa12.23□□□□□ -0.45
LETMD1-233ENST00000552433 PKDCCQ504Y2 493 aa12.23□□□□□ -0.45
LETMD1-233ENST00000552433 FAM187AA6NFU0 413 aa12.22□□□□□ -0.45
LETMD1-233ENST00000552433 TBC1D2Q9BYX2 928 aa12.22□□□□□ -0.45
LETMD1-233ENST00000552433 RETREG3Q86VR2 466 aa12.21□□□□□ -0.45
LETMD1-233ENST00000552433 JUNDP17535 347 aa12.2□□□□□ -0.46
LETMD1-233ENST00000552433 TRIM32Q13049 653 aa12.19□□□□□ -0.46
LETMD1-233ENST00000552433 DGAT1O75907 488 aa12.18□□□□□ -0.46
LETMD1-233ENST00000552433 MYT1Q01538 1121 aa12.17□□□□□ -0.46
LETMD1-233ENST00000552433 BCANQ96GW7 911 aa12.17□□□□□ -0.46
LETMD1-233ENST00000552433 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
LETMD1-233ENST00000552433 PTCRAQ6ISU1 281 aaPredicted RBP12.15□□□□□ -0.46
LETMD1-233ENST00000552433 CYP4X1Q8N118 509 aa12.15□□□□□ -0.46
LETMD1-233ENST00000552433 MTMR2Q13614 643 aa12.14□□□□□ -0.47
LETMD1-233ENST00000552433 RSBN1LQ6PCB5 846 aaPredicted RBP12.14□□□□□ -0.47
LETMD1-233ENST00000552433 PRR7Q8TB68 274 aa12.14□□□□□ -0.47
LETMD1-233ENST00000552433 NUDT12Q9BQG2 462 aa12.14□□□□□ -0.47
LETMD1-233ENST00000552433 TOR4AQ9NXH8 423 aa12.13□□□□□ -0.47
LETMD1-233ENST00000552433 CSPP1Q1MSJ5 1256 aa12.12□□□□□ -0.47
LETMD1-233ENST00000552433 RIC3Q7Z5B4 369 aa12.12□□□□□ -0.47
LETMD1-233ENST00000552433 DIXDC1Q155Q3 683 aa12.11□□□□□ -0.47
LETMD1-233ENST00000552433 ZNF787Q6DD87 383 aa12.11□□□□□ -0.47
LETMD1-233ENST00000552433 MRGPRX2Q96LB1 330 aa12.11□□□□□ -0.47
LETMD1-233ENST00000552433 TTC24A2A3L6 582 aaPredicted RBP12.1□□□□□ -0.47
LETMD1-233ENST00000552433 WNT7AO00755 349 aa12.1□□□□□ -0.47
LETMD1-233ENST00000552433 SPTLC1O15269 473 aa12.1□□□□□ -0.47
LETMD1-233ENST00000552433 ST8SIA5O15466 376 aa12.1□□□□□ -0.47
LETMD1-233ENST00000552433 SKOR1P84550 965 aa12.1□□□□□ -0.47
LETMD1-233ENST00000552433 CABLES1Q8TDN4 633 aa12.09□□□□□ -0.47
LETMD1-233ENST00000552433 RC3H1Q5TC82 1133 aaKnown RBP12.08□□□□□ -0.48
LETMD1-233ENST00000552433 SPDYE5A6NIY4 337 aa12.07□□□□□ -0.48
LETMD1-233ENST00000552433 CCNYL3P0C7X3 344 aa12.07□□□□□ -0.48
LETMD1-233ENST00000552433 HRCP23327 699 aa12.07□□□□□ -0.48
LETMD1-233ENST00000552433 GJA5P36382 358 aa12.07□□□□□ -0.48
LETMD1-233ENST00000552433 LIMD1Q9UGP4 676 aa12.07□□□□□ -0.48
LETMD1-233ENST00000552433 CFAP99D6REC4 459 aa12.06□□□□□ -0.48
LETMD1-233ENST00000552433 MYSM1Q5VVJ2 828 aa12.06□□□□□ -0.48
LETMD1-233ENST00000552433 SNIP1Q8TAD8 396 aaKnown RBP12.06□□□□□ -0.48
LETMD1-233ENST00000552433 AAASQ9NRG9 546 aa12.06□□□□□ -0.48
LETMD1-233ENST00000552433 POTECB2RU33 542 aa12.05□□□□□ -0.48
LETMD1-233ENST00000552433 PTPRNQ16849 979 aa12.05□□□□□ -0.48
LETMD1-233ENST00000552433 EVA1BQ9NVM1 165 aa12.05□□□□□ -0.48
LETMD1-233ENST00000552433 J3QL48 77 aa12.04□□□□□ -0.48
LETMD1-233ENST00000552433 ZBTB3Q9H5J0 574 aa12.04□□□□□ -0.48
LETMD1-233ENST00000552433 SMPD1P17405 629 aa12.03□□□□□ -0.48
LETMD1-233ENST00000552433 WNT7BP56706 349 aa12.03□□□□□ -0.48
LETMD1-233ENST00000552433 QPCTQ16769 361 aa12.03□□□□□ -0.48
LETMD1-233ENST00000552433 GPBP1L1Q9HC44 474 aaPredicted RBP12.03□□□□□ -0.48
LETMD1-233ENST00000552433 KCNH2Q12809 1159 aa12.02□□□□□ -0.49
LETMD1-233ENST00000552433 DESI1Q6ICB0 168 aa12.02□□□□□ -0.49
LETMD1-233ENST00000552433 UNC93B1Q9H1C4 597 aa12.02□□□□□ -0.49
LETMD1-233ENST00000552433 POLR3EQ9NVU0 708 aa12.02□□□□□ -0.49
LETMD1-233ENST00000552433 DACH1Q9UI36 760 aa12.02□□□□□ -0.49
LETMD1-233ENST00000552433 NUTM2BA6NNL0 878 aaPredicted RBP12.01□□□□□ -0.49
LETMD1-233ENST00000552433 NUTM2EB1AL46 878 aaPredicted RBP12.01□□□□□ -0.49
LETMD1-233ENST00000552433 CTHP32929 405 aa12.01□□□□□ -0.49
LETMD1-233ENST00000552433 LINC01559Q495D7 138 aa12.01□□□□□ -0.49
LETMD1-233ENST00000552433 NUTM2DQ5VT03 806 aaPredicted RBP12.01□□□□□ -0.49
LETMD1-233ENST00000552433 NUTM2AQ8IVF1 878 aaPredicted RBP12.01□□□□□ -0.49
LETMD1-233ENST00000552433 BAP1Q92560 729 aa12.01□□□□□ -0.49
LETMD1-233ENST00000552433 TSC1Q92574 1164 aa12.01□□□□□ -0.49
LETMD1-233ENST00000552433 SH3BP2P78314 561 aa12□□□□□ -0.49
LETMD1-233ENST00000552433 LYPD8Q6UX82 237 aa12□□□□□ -0.49
LETMD1-233ENST00000552433 AVPP01185 164 aa11.99□□□□□ -0.49
LETMD1-233ENST00000552433 PRPF38BQ5VTL8 546 aaKnown RBP11.99□□□□□ -0.49
LETMD1-233ENST00000552433 AXIN1O15169 862 aa11.98□□□□□ -0.49
LETMD1-233ENST00000552433 EHBP1Q8NDI1 1231 aa11.98□□□□□ -0.49
LETMD1-233ENST00000552433 PER1O15534 1290 aaPredicted RBP11.97□□□□□ -0.49
LETMD1-233ENST00000552433 ALDH1A1P00352 501 aa11.97□□□□□ -0.49
LETMD1-233ENST00000552433 RTL5Q5HYW3 569 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms