RNA–Protein interactions for RNA: ENST00000552248.5

CNTN1-210, Transcript of contactin 1, humanhuman

TSL 3

Gene CNTN1, Length 463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-210ENST00000552248 HOXA2O43364 376 aa10.44□□□□□ -0.74
CNTN1-210ENST00000552248 HLA-CQ95604 372 aa10.44□□□□□ -0.74
CNTN1-210ENST00000552248 SLC24A3Q9HC58 644 aa10.43□□□□□ -0.74
CNTN1-210ENST00000552248 GFRA3O60609 400 aa10.42□□□□□ -0.74
CNTN1-210ENST00000552248 PARP9Q8IXQ6 854 aa10.42□□□□□ -0.74
CNTN1-210ENST00000552248 FAM160A2Q8N612 972 aaPredicted RBP10.42□□□□□ -0.74
CNTN1-210ENST00000552248 GUCA2AQ02747 115 aa10.41□□□□□ -0.74
CNTN1-210ENST00000552248 LAPTM4AQ15012 233 aa10.41□□□□□ -0.74
CNTN1-210ENST00000552248 PRDM9Q9NQV7 894 aa10.41□□□□□ -0.74
CNTN1-210ENST00000552248 MSS51Q4VC12 460 aa10.4□□□□□ -0.74
CNTN1-210ENST00000552248 BEGAINQ9BUH8 593 aa10.4□□□□□ -0.74
CNTN1-210ENST00000552248 FCF1Q9Y324 198 aaKnown RBP10.4□□□□□ -0.74
CNTN1-210ENST00000552248 USB1Q9BQ65 265 aaKnown RBP10.39□□□□□ -0.75
CNTN1-210ENST00000552248 SMARCA4P51532 1647 aa10.39□□□□□ -0.75
CNTN1-210ENST00000552248 SPRYD7Q5W111 196 aa10.38□□□□□ -0.75
CNTN1-210ENST00000552248 Q6ZNB5 142 aa10.38□□□□□ -0.75
CNTN1-210ENST00000552248 LIAT1Q6ZQX7 453 aa10.38□□□□□ -0.75
CNTN1-210ENST00000552248 SPIRE2Q8WWL2 714 aa10.38□□□□□ -0.75
CNTN1-210ENST00000552248 PDZRN3Q9UPQ7 1066 aa10.38□□□□□ -0.75
CNTN1-210ENST00000552248 FDX1P10109 184 aa10.37□□□□□ -0.75
CNTN1-210ENST00000552248 PDE4DQ08499 809 aa10.37□□□□□ -0.75
CNTN1-210ENST00000552248 PLA2G2CQ5R387 149 aa10.37□□□□□ -0.75
CNTN1-210ENST00000552248 EMID1Q96A84 441 aaPredicted RBP10.37□□□□□ -0.75
CNTN1-210ENST00000552248 ZNF598Q86UK7 904 aaKnown RBP10.36□□□□□ -0.75
CNTN1-210ENST00000552248 WIZO95785 1651 aa10.36□□□□□ -0.75
CNTN1-210ENST00000552248 C6orf229H3BNL8 230 aa10.35□□□□□ -0.75
CNTN1-210ENST00000552248 MS4A1P11836 297 aa10.35□□□□□ -0.75
CNTN1-210ENST00000552248 ZNF697Q5TEC3 545 aa10.35□□□□□ -0.75
CNTN1-210ENST00000552248 NRG2O14511 850 aaPredicted RBP10.34□□□□□ -0.75
CNTN1-210ENST00000552248 ZBTB24O43167 697 aaPredicted RBP10.34□□□□□ -0.75
CNTN1-210ENST00000552248 DIXDC1Q155Q3 683 aa10.34□□□□□ -0.75
CNTN1-210ENST00000552248 SYMPKQ92797 1274 aaKnown RBP10.34□□□□□ -0.75
CNTN1-210ENST00000552248 MOXD2PA6NHM9 499 aa10.33□□□□□ -0.76
CNTN1-210ENST00000552248 NDUFV2P19404 249 aa10.33□□□□□ -0.76
CNTN1-210ENST00000552248 RPIAP49247 311 aa10.33□□□□□ -0.76
CNTN1-210ENST00000552248 TBC1D2Q9BYX2 928 aa10.33□□□□□ -0.76
CNTN1-210ENST00000552248 CD2BP2O95400 341 aaKnown RBP10.32□□□□□ -0.76
CNTN1-210ENST00000552248 MMP16P51512 607 aa10.32□□□□□ -0.76
CNTN1-210ENST00000552248 RETREG3Q86VR2 466 aa10.32□□□□□ -0.76
CNTN1-210ENST00000552248 CCDC24Q8N4L8 307 aa10.31□□□□□ -0.76
CNTN1-210ENST00000552248 PCDHGC3Q9UN70 934 aa10.31□□□□□ -0.76
CNTN1-210ENST00000552248 DXOO77932 396 aaKnown RBP10.3□□□□□ -0.76
CNTN1-210ENST00000552248 TOP2AP11388 1531 aaKnown RBP10.29□□□□□ -0.76
CNTN1-210ENST00000552248 JUNDP17535 347 aa10.29□□□□□ -0.76
CNTN1-210ENST00000552248 FOXC1Q12948 553 aa10.28□□□□□ -0.76
CNTN1-210ENST00000552248 TNFRSF10AO00220 468 aa10.27□□□□□ -0.77
CNTN1-210ENST00000552248 MTMR2Q13614 643 aa10.27□□□□□ -0.77
CNTN1-210ENST00000552248 TRIM67Q6ZTA4 783 aa10.27□□□□□ -0.77
CNTN1-210ENST00000552248 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
CNTN1-210ENST00000552248 RSBN1LQ6PCB5 846 aaPredicted RBP10.26□□□□□ -0.77
CNTN1-210ENST00000552248 SPDYE5A6NIY4 337 aa10.25□□□□□ -0.77
CNTN1-210ENST00000552248 GJA5P36382 358 aa10.25□□□□□ -0.77
CNTN1-210ENST00000552248 PRR20EP86478 221 aa10.25□□□□□ -0.77
CNTN1-210ENST00000552248 PRR20CP86479 221 aa10.25□□□□□ -0.77
CNTN1-210ENST00000552248 PRR20DP86480 221 aa10.25□□□□□ -0.77
CNTN1-210ENST00000552248 PRR20BP86481 221 aa10.25□□□□□ -0.77
CNTN1-210ENST00000552248 PRR20AP86496 221 aa10.25□□□□□ -0.77
CNTN1-210ENST00000552248 RIC3Q7Z5B4 369 aa10.25□□□□□ -0.77
CNTN1-210ENST00000552248 SPTLC1O15269 473 aa10.23□□□□□ -0.77
CNTN1-210ENST00000552248 GDF9O60383 454 aa10.23□□□□□ -0.77
CNTN1-210ENST00000552248 TRIM32Q13049 653 aa10.23□□□□□ -0.77
CNTN1-210ENST00000552248 CSPP1Q1MSJ5 1256 aa10.23□□□□□ -0.77
CNTN1-210ENST00000552248 PKDCCQ504Y2 493 aa10.23□□□□□ -0.77
CNTN1-210ENST00000552248 TRAF7Q6Q0C0 670 aa10.23□□□□□ -0.77
CNTN1-210ENST00000552248 PRR7Q8TB68 274 aa10.23□□□□□ -0.77
CNTN1-210ENST00000552248 NUDT12Q9BQG2 462 aa10.23□□□□□ -0.77
CNTN1-210ENST00000552248 ZBTB3Q9H5J0 574 aa10.22□□□□□ -0.77
CNTN1-210ENST00000552248 MYSM1Q5VVJ2 828 aa10.21□□□□□ -0.77
CNTN1-210ENST00000552248 PKD2L1Q9P0L9 805 aa10.21□□□□□ -0.77
CNTN1-210ENST00000552248 PCDHB15Q9Y5E8 787 aa10.21□□□□□ -0.77
CNTN1-210ENST00000552248 FAM187AA6NFU0 413 aa10.2□□□□□ -0.78
CNTN1-210ENST00000552248 SMARCA2P51531 1590 aa10.19□□□□□ -0.78
CNTN1-210ENST00000552248 ATAD2BQ9ULI0 1458 aa10.19□□□□□ -0.78
CNTN1-210ENST00000552248 CCNYL3P0C7X3 344 aa10.19□□□□□ -0.78
CNTN1-210ENST00000552248 CYP4X1Q8N118 509 aa10.19□□□□□ -0.78
CNTN1-210ENST00000552248 RSPH6AQ9H0K4 717 aa10.19□□□□□ -0.78
CNTN1-210ENST00000552248 KDM4CQ9H3R0 1056 aa10.19□□□□□ -0.78
CNTN1-210ENST00000552248 GPBP1L1Q9HC44 474 aaPredicted RBP10.19□□□□□ -0.78
CNTN1-210ENST00000552248 NUTM2BA6NNL0 878 aaPredicted RBP10.18□□□□□ -0.78
CNTN1-210ENST00000552248 NUTM2EB1AL46 878 aaPredicted RBP10.18□□□□□ -0.78
CNTN1-210ENST00000552248 DGAT1O75907 488 aa10.18□□□□□ -0.78
CNTN1-210ENST00000552248 HRCP23327 699 aa10.18□□□□□ -0.78
CNTN1-210ENST00000552248 PTPRNQ16849 979 aa10.18□□□□□ -0.78
CNTN1-210ENST00000552248 NUTM2DQ5VT03 806 aaPredicted RBP10.18□□□□□ -0.78
CNTN1-210ENST00000552248 PRPF38BQ5VTL8 546 aaKnown RBP10.18□□□□□ -0.78
CNTN1-210ENST00000552248 NUTM2AQ8IVF1 878 aaPredicted RBP10.18□□□□□ -0.78
CNTN1-210ENST00000552248 DESI1Q6ICB0 168 aa10.17□□□□□ -0.78
CNTN1-210ENST00000552248 CABLES1Q8TDN4 633 aa10.17□□□□□ -0.78
CNTN1-210ENST00000552248 LIMD1Q9UGP4 676 aa10.17□□□□□ -0.78
CNTN1-210ENST00000552248 EIF4G1Q04637 1599 aaKnown RBP10.17□□□□□ -0.78
CNTN1-210ENST00000552248 TSC1Q92574 1164 aa10.16□□□□□ -0.78
CNTN1-210ENST00000552248 ATP1B4Q9UN42 357 aaPredicted RBP10.16□□□□□ -0.78
CNTN1-210ENST00000552248 CCDC88BA6NC98 1476 aa10.16□□□□□ -0.78
CNTN1-210ENST00000552248 TTC24A2A3L6 582 aaPredicted RBP10.15□□□□□ -0.78
CNTN1-210ENST00000552248 CFAP99D6REC4 459 aa10.15□□□□□ -0.78
CNTN1-210ENST00000552248 WNT7AO00755 349 aa10.15□□□□□ -0.78
CNTN1-210ENST00000552248 CLK2P49760 499 aaKnown RBP10.15□□□□□ -0.78
CNTN1-210ENST00000552248 DDRGK1Q96HY6 314 aa10.15□□□□□ -0.78
CNTN1-210ENST00000552248 POLR3EQ9NVU0 708 aa10.15□□□□□ -0.78
CNTN1-210ENST00000552248 LCE2BO14633 110 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms