RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 SAFB2Q14151 953 aaKnown RBP eCLIP18.64■□□□□ 0.57
RAB3IP-216ENST00000552199 CABP2Q9NPB3 220 aa18.63■□□□□ 0.57
RAB3IP-216ENST00000552199 ANKRD36BQ8N2N9 1353 aa18.63■□□□□ 0.57
RAB3IP-216ENST00000552199 CDCA7LQ96GN5 454 aa18.62■□□□□ 0.57
RAB3IP-216ENST00000552199 MORC1Q86VD1 984 aa18.62■□□□□ 0.57
RAB3IP-216ENST00000552199 PRAM1Q96QH2 718 aa18.62■□□□□ 0.57
RAB3IP-216ENST00000552199 POGKQ9P215 609 aa18.61■□□□□ 0.57
RAB3IP-216ENST00000552199 RCAN3Q9UKA8 241 aa18.61■□□□□ 0.57
RAB3IP-216ENST00000552199 CGNL1Q0VF96 1302 aa18.61■□□□□ 0.57
RAB3IP-216ENST00000552199 NINLQ9Y2I6 1382 aa18.61■□□□□ 0.57
RAB3IP-216ENST00000552199 POLR3AO14802 1390 aaPredicted RBP18.6■□□□□ 0.57
RAB3IP-216ENST00000552199 SETD1AO15047 1707 aaKnown RBP18.6■□□□□ 0.57
RAB3IP-216ENST00000552199 MINK1Q8N4C8 1332 aaPredicted RBP18.59■□□□□ 0.57
RAB3IP-216ENST00000552199 SRPK2P78362 688 aaKnown RBP18.59■□□□□ 0.57
RAB3IP-216ENST00000552199 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.58■□□□□ 0.56
RAB3IP-216ENST00000552199 DLC1Q96QB1 1528 aa18.58■□□□□ 0.56
RAB3IP-216ENST00000552199 PLEKHH1Q9ULM0 1364 aa18.58■□□□□ 0.56
RAB3IP-216ENST00000552199 NSD2O96028 1365 aa18.57■□□□□ 0.56
RAB3IP-216ENST00000552199 ATAD2Q6PL18 1390 aa18.57■□□□□ 0.56
RAB3IP-216ENST00000552199 RRP1P56182 461 aaKnown RBP18.57■□□□□ 0.56
RAB3IP-216ENST00000552199 B4GALNT3Q6L9W6 998 aa18.57■□□□□ 0.56
RAB3IP-216ENST00000552199 TNRQ92752 1358 aa18.56■□□□□ 0.56
RAB3IP-216ENST00000552199 ZNF521Q96K83 1311 aa18.56■□□□□ 0.56
RAB3IP-216ENST00000552199 NRXN3Q9Y4C0 1643 aa18.55■□□□□ 0.56
RAB3IP-216ENST00000552199 CCDC146Q8IYE0 955 aa18.54■□□□□ 0.56
RAB3IP-216ENST00000552199 A0A1W2PP64 1363 aa18.54■□□□□ 0.56
RAB3IP-216ENST00000552199 ABCC11Q96J66 1382 aa18.54■□□□□ 0.56
RAB3IP-216ENST00000552199 SHPRHQ149N8 1683 aa18.53■□□□□ 0.56
RAB3IP-216ENST00000552199 TNNT2P45379 298 aaPredicted RBP18.53■□□□□ 0.56
RAB3IP-216ENST00000552199 HDGFP51858 240 aaKnown RBP18.53■□□□□ 0.56
RAB3IP-216ENST00000552199 CDK19Q9BWU1 502 aa18.53■□□□□ 0.56
RAB3IP-216ENST00000552199 GOLGA2Q08379 1002 aa18.51■□□□□ 0.55
RAB3IP-216ENST00000552199 TERF2IPQ9NYB0 399 aa18.51■□□□□ 0.55
RAB3IP-216ENST00000552199 APAF1O14727 1248 aa18.51■□□□□ 0.55
RAB3IP-216ENST00000552199 NGEFQ8N5V2 710 aa18.51■□□□□ 0.55
RAB3IP-216ENST00000552199 UBR1Q8IWV7 1749 aa18.51■□□□□ 0.55
RAB3IP-216ENST00000552199 CD163L1Q9NR16 1453 aa18.5■□□□□ 0.55
RAB3IP-216ENST00000552199 MTHFSP49914 203 aa18.5■□□□□ 0.55
RAB3IP-216ENST00000552199 WAPLQ7Z5K2 1190 aa18.5■□□□□ 0.55
RAB3IP-216ENST00000552199 DUSP27Q5VZP5 1158 aa18.49■□□□□ 0.55
RAB3IP-216ENST00000552199 METP08581 1390 aa18.48■□□□□ 0.55
RAB3IP-216ENST00000552199 CFAP53Q96M91 514 aa18.48■□□□□ 0.55
RAB3IP-216ENST00000552199 TMEM2Q9UHN6 1383 aa18.47■□□□□ 0.55
RAB3IP-216ENST00000552199 SLFN5Q08AF3 891 aa18.47■□□□□ 0.55
RAB3IP-216ENST00000552199 CCDC136Q96JN2 1154 aa18.47■□□□□ 0.55
RAB3IP-216ENST00000552199 ANKRD26Q9UPS8 1709 aa18.47■□□□□ 0.55
RAB3IP-216ENST00000552199 HDGFL2Q7Z4V5 671 aaPredicted RBP18.47■□□□□ 0.55
RAB3IP-216ENST00000552199 MED14O60244 1454 aa18.46■□□□□ 0.55
RAB3IP-216ENST00000552199 KNDC1Q76NI1 1749 aa18.46■□□□□ 0.55
RAB3IP-216ENST00000552199 TRMT2AQ8IZ69 625 aaKnown RBP18.46■□□□□ 0.55
RAB3IP-216ENST00000552199 SIRT1Q96EB6 747 aa18.45■□□□□ 0.54
RAB3IP-216ENST00000552199 CABP1Q9NZU7 370 aa18.45■□□□□ 0.54
RAB3IP-216ENST00000552199 NLRP1Q9C000 1473 aa18.44■□□□□ 0.54
RAB3IP-216ENST00000552199 FYB1O15117 783 aa18.44■□□□□ 0.54
RAB3IP-216ENST00000552199 EXOC6Q8TAG9 804 aa18.44■□□□□ 0.54
RAB3IP-216ENST00000552199 GGNBP2Q9H3C7 697 aa18.44■□□□□ 0.54
RAB3IP-216ENST00000552199 RBM19Q9Y4C8 960 aaKnown RBP18.44■□□□□ 0.54
RAB3IP-216ENST00000552199 RUNDC1Q96C34 613 aa18.43■□□□□ 0.54
RAB3IP-216ENST00000552199 TECPR2O15040 1411 aa18.43■□□□□ 0.54
RAB3IP-216ENST00000552199 FAM135BQ49AJ0 1406 aa18.43■□□□□ 0.54
RAB3IP-216ENST00000552199 TRHP20396 242 aaPredicted RBP18.43■□□□□ 0.54
RAB3IP-216ENST00000552199 ATP7BP35670 1465 aa18.42■□□□□ 0.54
RAB3IP-216ENST00000552199 KIF20BQ96Q89 1820 aa18.42■□□□□ 0.54
RAB3IP-216ENST00000552199 TXNDC2Q86VQ3 553 aa18.41■□□□□ 0.54
RAB3IP-216ENST00000552199 CPS1P31327 1500 aa18.41■□□□□ 0.54
RAB3IP-216ENST00000552199 C3P01024 1663 aa18.41■□□□□ 0.54
RAB3IP-216ENST00000552199 E9PSI1 815 aa18.41■□□□□ 0.54
RAB3IP-216ENST00000552199 WASLO00401 505 aaPredicted RBP18.41■□□□□ 0.54
RAB3IP-216ENST00000552199 CEBPAP49715 358 aaPredicted RBP18.41■□□□□ 0.54
RAB3IP-216ENST00000552199 PLIN1O60240 522 aa18.4■□□□□ 0.54
RAB3IP-216ENST00000552199 SPINK5Q9NQ38 1064 aaPredicted RBP18.4■□□□□ 0.54
RAB3IP-216ENST00000552199 IQSEC2Q5JU85 1478 aa18.4■□□□□ 0.54
RAB3IP-216ENST00000552199 ADAMTS13Q76LX8 1427 aa18.39■□□□□ 0.53
RAB3IP-216ENST00000552199 WWC1Q8IX03 1113 aa18.39■□□□□ 0.53
RAB3IP-216ENST00000552199 PLEKHG1Q9ULL1 1385 aa18.38■□□□□ 0.53
RAB3IP-216ENST00000552199 FER1L4A9Z1Z3 1794 aa18.38■□□□□ 0.53
RAB3IP-216ENST00000552199 NKTRP30414 1462 aaKnown RBP18.38■□□□□ 0.53
RAB3IP-216ENST00000552199 LTKP29376 864 aa18.37■□□□□ 0.53
RAB3IP-216ENST00000552199 TCP11L2Q8N4U5 519 aa18.37■□□□□ 0.53
RAB3IP-216ENST00000552199 DMRT2Q9Y5R5 561 aa18.37■□□□□ 0.53
RAB3IP-216ENST00000552199 COL3A1P02461 1466 aaPredicted RBP18.36■□□□□ 0.53
RAB3IP-216ENST00000552199 U2AF1L5P0DN76 240 aaPredicted RBP18.35■□□□□ 0.53
RAB3IP-216ENST00000552199 U2AF1Q01081 240 aaKnown RBP eCLIP18.35■□□□□ 0.53
RAB3IP-216ENST00000552199 CPSF1Q10570 1443 aaKnown RBP18.35■□□□□ 0.53
RAB3IP-216ENST00000552199 NCBP3Q53F19 620 aaKnown RBP18.35■□□□□ 0.53
RAB3IP-216ENST00000552199 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
RAB3IP-216ENST00000552199 PPIP5K1Q6PFW1 1433 aa18.35■□□□□ 0.53
RAB3IP-216ENST00000552199 CRBNQ96SW2 442 aa18.35■□□□□ 0.53
RAB3IP-216ENST00000552199 NUDT16Q96DE0 195 aaKnown RBP18.34■□□□□ 0.53
RAB3IP-216ENST00000552199 SLIT1O75093 1534 aa18.33■□□□□ 0.53
RAB3IP-216ENST00000552199 CCDC27Q2M243 656 aa18.33■□□□□ 0.53
RAB3IP-216ENST00000552199 ROBO2Q9HCK4 1378 aa18.33■□□□□ 0.53
RAB3IP-216ENST00000552199 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.33■□□□□ 0.52
RAB3IP-216ENST00000552199 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.33■□□□□ 0.52
RAB3IP-216ENST00000552199 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.52
RAB3IP-216ENST00000552199 EID1Q9Y6B2 187 aa18.33■□□□□ 0.52
RAB3IP-216ENST00000552199 ARHGAP23Q9P227 1491 aa18.33■□□□□ 0.52
RAB3IP-216ENST00000552199 EDC4Q6P2E9 1401 aaKnown RBP18.32■□□□□ 0.52
RAB3IP-216ENST00000552199 NEUROD2Q15784 382 aa18.32■□□□□ 0.52
RAB3IP-216ENST00000552199 WDR63Q8IWG1 891 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms