RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 E9PCH4 1651 aa16.26■□□□□ 0.19
SLC48A1-209ENST00000552003 SF3B2Q13435 895 aaKnown RBP16.25■□□□□ 0.19
SLC48A1-209ENST00000552003 R3HDM1Q15032 1099 aaKnown RBP16.25■□□□□ 0.19
SLC48A1-209ENST00000552003 PXDNQ92626 1479 aa16.24■□□□□ 0.19
SLC48A1-209ENST00000552003 ONECUT3O60422 494 aaPredicted RBP16.22■□□□□ 0.19
SLC48A1-209ENST00000552003 XPCQ01831 940 aaPredicted RBP16.22■□□□□ 0.19
SLC48A1-209ENST00000552003 IFFO2Q5TF58 517 aa16.22■□□□□ 0.19
SLC48A1-209ENST00000552003 EN1Q05925 392 aaPredicted RBP16.21■□□□□ 0.19
SLC48A1-209ENST00000552003 UTRNP46939 3433 aa16.2■□□□□ 0.18
SLC48A1-209ENST00000552003 ROBO2Q9HCK4 1378 aa16.2■□□□□ 0.18
SLC48A1-209ENST00000552003 ADGRL2O95490 1459 aa16.19■□□□□ 0.18
SLC48A1-209ENST00000552003 KRT27Q7Z3Y8 459 aa16.19■□□□□ 0.18
SLC48A1-209ENST00000552003 BAG6P46379 1132 aa16.18■□□□□ 0.18
SLC48A1-209ENST00000552003 ANKRD50Q9ULJ7 1429 aa16.18■□□□□ 0.18
SLC48A1-209ENST00000552003 IQGAP3Q86VI3 1631 aa16.16■□□□□ 0.18
SLC48A1-209ENST00000552003 VPS8Q8N3P4 1428 aa16.16■□□□□ 0.18
SLC48A1-209ENST00000552003 FOXO3O43524 673 aa16.15■□□□□ 0.18
SLC48A1-209ENST00000552003 VPS72Q15906 364 aa16.15■□□□□ 0.18
SLC48A1-209ENST00000552003 FAM182BQ5T319 152 aa16.14■□□□□ 0.17
SLC48A1-209ENST00000552003 NPHP3Q7Z494 1330 aa16.14■□□□□ 0.17
SLC48A1-209ENST00000552003 USP32Q8NFA0 1604 aa16.13■□□□□ 0.17
SLC48A1-209ENST00000552003 ADRA2BP18089 450 aa16.13■□□□□ 0.17
SLC48A1-209ENST00000552003 ESCO1Q5FWF5 840 aa16.13■□□□□ 0.17
SLC48A1-209ENST00000552003 TNS1Q9HBL0 1735 aaKnown RBP16.12■□□□□ 0.17
SLC48A1-209ENST00000552003 EZH2Q15910 746 aaKnown RBP16.12■□□□□ 0.17
SLC48A1-209ENST00000552003 PLCH1Q4KWH8 1693 aa16.11■□□□□ 0.17
SLC48A1-209ENST00000552003 RGPD1P0DJD0 1748 aa16.11■□□□□ 0.17
SLC48A1-209ENST00000552003 NEXMIFQ5QGS0 1516 aa16.11■□□□□ 0.17
SLC48A1-209ENST00000552003 CAMTA1Q9Y6Y1 1673 aa16.1■□□□□ 0.17
SLC48A1-209ENST00000552003 DISP2A7MBM2 1401 aa16.1■□□□□ 0.17
SLC48A1-209ENST00000552003 SPATA31A3Q5VYP0 1347 aa16.09■□□□□ 0.17
SLC48A1-209ENST00000552003 CABLES1Q8TDN4 633 aa16.08■□□□□ 0.16
SLC48A1-209ENST00000552003 CAMKK2Q96RR4 588 aa16.08■□□□□ 0.16
SLC48A1-209ENST00000552003 NWD2Q9ULI1 1742 aa16.08■□□□□ 0.16
SLC48A1-209ENST00000552003 ZNF326Q5BKZ1 582 aaKnown RBP16.07■□□□□ 0.16
SLC48A1-209ENST00000552003 PRAG1Q86YV5 1406 aa16.07■□□□□ 0.16
SLC48A1-209ENST00000552003 SENP3-EIF4A1A0A087X0R7 540 aa16.06■□□□□ 0.16
SLC48A1-209ENST00000552003 FAM98CQ17RN3 349 aaKnown RBP16.06■□□□□ 0.16
SLC48A1-209ENST00000552003 ZNF784Q8NCA9 323 aaPredicted RBP16.06■□□□□ 0.16
SLC48A1-209ENST00000552003 CCDC9Q9Y3X0 531 aaKnown RBP16.06■□□□□ 0.16
SLC48A1-209ENST00000552003 CDC42BPGQ6DT37 1551 aa16.05■□□□□ 0.16
SLC48A1-209ENST00000552003 CEP350Q5VT06 3117 aa16.05■□□□□ 0.16
SLC48A1-209ENST00000552003 NUTM2FA1L443 756 aa16.05■□□□□ 0.16
SLC48A1-209ENST00000552003 NRAPQ86VF7 1730 aa16.04■□□□□ 0.16
SLC48A1-209ENST00000552003 ABCA3Q99758 1704 aa16.03■□□□□ 0.16
SLC48A1-209ENST00000552003 FAM83GA6ND36 823 aa16.03■□□□□ 0.16
SLC48A1-209ENST00000552003 HFM1A2PYH4 1435 aa16.02■□□□□ 0.16
SLC48A1-209ENST00000552003 PLEKHG5O94827 1062 aa16.02■□□□□ 0.16
SLC48A1-209ENST00000552003 A0A0G2JS52 829 aa16.01■□□□□ 0.15
SLC48A1-209ENST00000552003 MYT1Q01538 1121 aa16.01■□□□□ 0.15
SLC48A1-209ENST00000552003 NUP188Q5SRE5 1749 aa16■□□□□ 0.15
SLC48A1-209ENST00000552003 RREB1Q92766 1687 aa16■□□□□ 0.15
SLC48A1-209ENST00000552003 CLTCL1P53675 1640 aa16■□□□□ 0.15
SLC48A1-209ENST00000552003 C1QTNF8P60827 252 aa15.99■□□□□ 0.15
SLC48A1-209ENST00000552003 KRT28Q7Z3Y7 464 aa15.99■□□□□ 0.15
SLC48A1-209ENST00000552003 NAIPQ13075 1403 aa15.99■□□□□ 0.15
SLC48A1-209ENST00000552003 NUP155O75694 1391 aa15.99■□□□□ 0.15
SLC48A1-209ENST00000552003 LRPPRCP42704 1394 aaKnown RBP15.99■□□□□ 0.15
SLC48A1-209ENST00000552003 THSD7AQ9UPZ6 1657 aa15.99■□□□□ 0.15
SLC48A1-209ENST00000552003 TRIM37O94972 964 aa15.97■□□□□ 0.15
SLC48A1-209ENST00000552003 NINLQ9Y2I6 1382 aa15.97■□□□□ 0.15
SLC48A1-209ENST00000552003 WAPLQ7Z5K2 1190 aa15.96■□□□□ 0.15
SLC48A1-209ENST00000552003 TNS3Q68CZ2 1445 aa15.95■□□□□ 0.14
SLC48A1-209ENST00000552003 FAM50AQ14320 339 aaKnown RBP15.95■□□□□ 0.14
SLC48A1-209ENST00000552003 RGPD8O14715 1765 aaPredicted RBP15.95■□□□□ 0.14
SLC48A1-209ENST00000552003 CCDC144AA2RUR9 1427 aa15.94■□□□□ 0.14
SLC48A1-209ENST00000552003 FMN2Q9NZ56 1722 aa15.94■□□□□ 0.14
SLC48A1-209ENST00000552003 KCNQ2O43526 872 aa15.94■□□□□ 0.14
SLC48A1-209ENST00000552003 SPON1Q9HCB6 807 aa15.94■□□□□ 0.14
SLC48A1-209ENST00000552003 BTG4Q9NY30 223 aa15.94■□□□□ 0.14
SLC48A1-209ENST00000552003 PLEKHH1Q9ULM0 1364 aa15.94■□□□□ 0.14
SLC48A1-209ENST00000552003 SPATA31A5Q5VU36 1347 aa15.94■□□□□ 0.14
SLC48A1-209ENST00000552003 SPATA31A7Q8IWB4 1347 aa15.94■□□□□ 0.14
SLC48A1-209ENST00000552003 APBA3O96018 575 aa15.93■□□□□ 0.14
SLC48A1-209ENST00000552003 HAP1P54257 671 aaPredicted RBP15.93■□□□□ 0.14
SLC48A1-209ENST00000552003 PPP1R1BQ9UD71 204 aaPredicted RBP15.93■□□□□ 0.14
SLC48A1-209ENST00000552003 KIF1AQ12756 1690 aa15.92■□□□□ 0.14
SLC48A1-209ENST00000552003 ADGRB2O60241 1585 aa15.92■□□□□ 0.14
SLC48A1-209ENST00000552003 PARD3Q8TEW0 1356 aa15.9■□□□□ 0.14
SLC48A1-209ENST00000552003 KIF1BO60333 1816 aa15.9■□□□□ 0.14
SLC48A1-209ENST00000552003 DCAF8L1A6NGE4 600 aa15.89■□□□□ 0.13
SLC48A1-209ENST00000552003 PDGFDQ9GZP0 370 aaPredicted RBP15.89■□□□□ 0.13
SLC48A1-209ENST00000552003 LOC105371045A0A1W2PR82 267 aa15.88■□□□□ 0.13
SLC48A1-209ENST00000552003 VGFO15240 615 aaPredicted RBP15.88■□□□□ 0.13
SLC48A1-209ENST00000552003 CHD4Q14839 1912 aa15.88■□□□□ 0.13
SLC48A1-209ENST00000552003 NRKQ7Z2Y5 1582 aa15.87■□□□□ 0.13
SLC48A1-209ENST00000552003 FAM196AQ6ZSG2 479 aa15.87■□□□□ 0.13
SLC48A1-209ENST00000552003 COL14A1Q05707 1796 aaKnown RBP15.87■□□□□ 0.13
SLC48A1-209ENST00000552003 SBNO1A3KN83 1393 aa15.87■□□□□ 0.13
SLC48A1-209ENST00000552003 TECPR2O15040 1411 aa15.86■□□□□ 0.13
SLC48A1-209ENST00000552003 CASZ1Q86V15 1759 aa15.86■□□□□ 0.13
SLC48A1-209ENST00000552003 LMOD2Q6P5Q4 547 aa15.86■□□□□ 0.13
SLC48A1-209ENST00000552003 STK26Q9P289 416 aa15.86■□□□□ 0.13
SLC48A1-209ENST00000552003 ROCK1Q13464 1354 aa15.86■□□□□ 0.13
SLC48A1-209ENST00000552003 PPLO60437 1756 aa15.85■□□□□ 0.13
SLC48A1-209ENST00000552003 NBPF8Q3BBV2 869 aa15.85■□□□□ 0.13
SLC48A1-209ENST00000552003 NBPF14Q5TI25 921 aa15.85■□□□□ 0.13
SLC48A1-209ENST00000552003 PHF8Q9UPP1 1060 aa15.85■□□□□ 0.13
SLC48A1-209ENST00000552003 MYOM1P52179 1685 aa15.85■□□□□ 0.13
SLC48A1-209ENST00000552003 NRXN1Q9ULB1 1477 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms