RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.23■□□□□ 0.03
PTCH1-225ENST00000551845 AFF2P51816 1311 aa15.23■□□□□ 0.03
PTCH1-225ENST00000551845 NRXN1Q9ULB1 1477 aa15.23■□□□□ 0.03
PTCH1-225ENST00000551845 POTEDQ86YR6 584 aa15.23■□□□□ 0.03
PTCH1-225ENST00000551845 LRPPRCP42704 1394 aaKnown RBP15.23■□□□□ 0.03
PTCH1-225ENST00000551845 TONSLQ96HA7 1378 aa15.23■□□□□ 0.03
PTCH1-225ENST00000551845 CLSPNQ9HAW4 1339 aa15.22■□□□□ 0.03
PTCH1-225ENST00000551845 WAPLQ7Z5K2 1190 aa15.22■□□□□ 0.03
PTCH1-225ENST00000551845 PPLO60437 1756 aa15.21■□□□□ 0.03
PTCH1-225ENST00000551845 NRXN3Q9Y4C0 1643 aa15.21■□□□□ 0.03
PTCH1-225ENST00000551845 POGKQ9P215 609 aa15.2■□□□□ 0.02
PTCH1-225ENST00000551845 TRAK1Q9UPV9 953 aa15.2■□□□□ 0.02
PTCH1-225ENST00000551845 ROBO2Q9HCK4 1378 aa15.2■□□□□ 0.02
PTCH1-225ENST00000551845 YTHDC2Q9H6S0 1430 aaKnown RBP15.19■□□□□ 0.02
PTCH1-225ENST00000551845 TIMELESSQ9UNS1 1208 aa15.19■□□□□ 0.02
PTCH1-225ENST00000551845 NBPF1Q3BBV0 1214 aa15.18■□□□□ 0.02
PTCH1-225ENST00000551845 BRINP3Q76B58 766 aa15.18■□□□□ 0.02
PTCH1-225ENST00000551845 C8orf37Q96NL8 207 aa15.18■□□□□ 0.02
PTCH1-225ENST00000551845 QTRT2Q9H974 415 aaKnown RBP15.18■□□□□ 0.02
PTCH1-225ENST00000551845 RBM6P78332 1123 aaKnown RBP15.17■□□□□ 0.02
PTCH1-225ENST00000551845 PRAM1Q96QH2 718 aa15.17■□□□□ 0.02
PTCH1-225ENST00000551845 RGS12O14924 1447 aa15.17■□□□□ 0.02
PTCH1-225ENST00000551845 PTCH1Q13635 1447 aa15.16■□□□□ 0.02
PTCH1-225ENST00000551845 SAFB2Q14151 953 aaKnown RBP eCLIP15.15■□□□□ 0.02
PTCH1-225ENST00000551845 TECPR2O15040 1411 aa15.15■□□□□ 0.02
PTCH1-225ENST00000551845 PRAG1Q86YV5 1406 aa15.15■□□□□ 0.02
PTCH1-225ENST00000551845 NBPF8Q3BBV2 869 aa15.14■□□□□ 0.01
PTCH1-225ENST00000551845 LRRC59Q96AG4 307 aaKnown RBP15.14■□□□□ 0.01
PTCH1-225ENST00000551845 IFT172Q9UG01 1749 aa15.13■□□□□ 0.01
PTCH1-225ENST00000551845 ASXL1Q8IXJ9 1541 aa15.12■□□□□ 0.01
PTCH1-225ENST00000551845 NGLY1Q96IV0 654 aa15.12■□□□□ 0.01
PTCH1-225ENST00000551845 PLEKHH1Q9ULM0 1364 aa15.11■□□□□ 0.01
PTCH1-225ENST00000551845 ADGRL3Q9HAR2 1447 aa15.11■□□□□ 0.01
PTCH1-225ENST00000551845 ZRANB1Q9UGI0 708 aa15.11■□□□□ 0.01
PTCH1-225ENST00000551845 ATAD2Q6PL18 1390 aa15.11■□□□□ 0.01
PTCH1-225ENST00000551845 NHSL1Q5SYE7 1610 aa15.1■□□□□ 0.01
PTCH1-225ENST00000551845 DCCP43146 1447 aa15.1■□□□□ 0.01
PTCH1-225ENST00000551845 XRN1Q8IZH2 1706 aaKnown RBP15.1■□□□□ 0.01
PTCH1-225ENST00000551845 ADAMTS2O95450 1211 aa15.1■□□□□ 0.01
PTCH1-225ENST00000551845 ROCK2O75116 1388 aaKnown RBP15.09■□□□□ 0.01
PTCH1-225ENST00000551845 ADGRB1O14514 1584 aa15.08■□□□□ 0
PTCH1-225ENST00000551845 NUTM2FA1L443 756 aa15.08■□□□□ 0
PTCH1-225ENST00000551845 ESCO1Q5FWF5 840 aa15.08■□□□□ 0
PTCH1-225ENST00000551845 DDX17Q92841 729 aaKnown RBP15.08■□□□□ 0
PTCH1-225ENST00000551845 CARD11Q9BXL7 1154 aa15.08■□□□□ 0
PTCH1-225ENST00000551845 MINK1Q8N4C8 1332 aaPredicted RBP15.08■□□□□ 0
PTCH1-225ENST00000551845 PNPLA6Q8IY17 1366 aa15.08■□□□□ 0
PTCH1-225ENST00000551845 MST1RQ04912 1400 aa15.08■□□□□ 0
PTCH1-225ENST00000551845 ORAI2Q96SN7 254 aa15.07■□□□□ 0
PTCH1-225ENST00000551845 HIRIP3Q9BW71 556 aaPredicted RBP15.07■□□□□ 0
PTCH1-225ENST00000551845 LAMC1P11047 1609 aa15.06■□□□□ 0
PTCH1-225ENST00000551845 WASLO00401 505 aaPredicted RBP15.06■□□□□ 0
PTCH1-225ENST00000551845 USP21Q9UK80 565 aa15.05■□□□□ -0
PTCH1-225ENST00000551845 CENPJQ9HC77 1338 aaPredicted RBP15.05■□□□□ -0
PTCH1-225ENST00000551845 DLC1Q96QB1 1528 aa15.05■□□□□ -0
PTCH1-225ENST00000551845 C1orf167Q5SNV9 1468 aa15.03■□□□□ -0
PTCH1-225ENST00000551845 CDK19Q9BWU1 502 aa15.03■□□□□ -0
PTCH1-225ENST00000551845 TRPC5Q9UL62 973 aaPredicted RBP15.03■□□□□ -0
PTCH1-225ENST00000551845 FOXO3O43524 673 aa15.01□□□□□ -0.01
PTCH1-225ENST00000551845 EIF3AQ14152 1382 aaKnown RBP15□□□□□ -0.01
PTCH1-225ENST00000551845 GPRASP1Q5JY77 1395 aa15□□□□□ -0.01
PTCH1-225ENST00000551845 PHF8Q9UPP1 1060 aa15□□□□□ -0.01
PTCH1-225ENST00000551845 SLC24A1O60721 1099 aa14.99□□□□□ -0.01
PTCH1-225ENST00000551845 SRPK2P78362 688 aaKnown RBP14.99□□□□□ -0.01
PTCH1-225ENST00000551845 CCDC125Q86Z20 511 aa14.99□□□□□ -0.01
PTCH1-225ENST00000551845 KIAA1210Q9ULL0 1709 aa14.98□□□□□ -0.01
PTCH1-225ENST00000551845 NUDT16Q96DE0 195 aaKnown RBP14.98□□□□□ -0.01
PTCH1-225ENST00000551845 NALCNQ8IZF0 1738 aa14.97□□□□□ -0.01
PTCH1-225ENST00000551845 NPHP3Q7Z494 1330 aa14.97□□□□□ -0.01
PTCH1-225ENST00000551845 EVC2Q86UK5 1308 aa14.97□□□□□ -0.01
PTCH1-225ENST00000551845 PSME1Q06323 249 aa14.97□□□□□ -0.01
PTCH1-225ENST00000551845 PMFBP1Q8TBY8 1022 aa14.97□□□□□ -0.01
PTCH1-225ENST00000551845 CCDC61Q9Y6R9 512 aa14.97□□□□□ -0.01
PTCH1-225ENST00000551845 KNDC1Q76NI1 1749 aa14.97□□□□□ -0.01
PTCH1-225ENST00000551845 ATRNO75882 1429 aa14.96□□□□□ -0.01
PTCH1-225ENST00000551845 FNBP4Q8N3X1 1017 aaPredicted RBP14.96□□□□□ -0.01
PTCH1-225ENST00000551845 SOS2Q07890 1332 aaPredicted RBP14.95□□□□□ -0.02
PTCH1-225ENST00000551845 ST20-MTHFSA0A0A6YYL1 179 aa14.95□□□□□ -0.02
PTCH1-225ENST00000551845 KRT28Q7Z3Y7 464 aa14.95□□□□□ -0.02
PTCH1-225ENST00000551845 NGDNQ8NEJ9 315 aaKnown RBP14.95□□□□□ -0.02
PTCH1-225ENST00000551845 CABP2Q9NPB3 220 aa14.95□□□□□ -0.02
PTCH1-225ENST00000551845 RALGAPBQ86X10 1494 aa14.95□□□□□ -0.02
PTCH1-225ENST00000551845 CDC42BPGQ6DT37 1551 aa14.94□□□□□ -0.02
PTCH1-225ENST00000551845 PRR36Q9H6K5 1346 aa14.93□□□□□ -0.02
PTCH1-225ENST00000551845 ANKARQ7Z5J8 1434 aa14.93□□□□□ -0.02
PTCH1-225ENST00000551845 XPCQ01831 940 aaPredicted RBP14.93□□□□□ -0.02
PTCH1-225ENST00000551845 TRPM1Q7Z4N2 1603 aa14.92□□□□□ -0.02
PTCH1-225ENST00000551845 PLEKHG3A1L390 1219 aa14.91□□□□□ -0.02
PTCH1-225ENST00000551845 CABP1Q9NZU7 370 aa14.91□□□□□ -0.02
PTCH1-225ENST00000551845 SRCAPQ6ZRS2 3230 aa14.91□□□□□ -0.02
PTCH1-225ENST00000551845 GJD4Q96KN9 370 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-225ENST00000551845 COL22A1Q8NFW1 1626 aaPredicted RBP14.89□□□□□ -0.03
PTCH1-225ENST00000551845 SF3B2Q13435 895 aaKnown RBP14.89□□□□□ -0.03
PTCH1-225ENST00000551845 PUS7Q96PZ0 661 aaKnown RBP14.89□□□□□ -0.03
PTCH1-225ENST00000551845 EIF4G2P78344 907 aaKnown RBP eCLIP14.88□□□□□ -0.03
PTCH1-225ENST00000551845 TMF1P82094 1093 aa14.88□□□□□ -0.03
PTCH1-225ENST00000551845 LMOD2Q6P5Q4 547 aa14.88□□□□□ -0.03
PTCH1-225ENST00000551845 TESK2Q96S53 571 aa14.88□□□□□ -0.03
PTCH1-225ENST00000551845 MARF1Q9Y4F3 1742 aaKnown RBP14.88□□□□□ -0.03
PTCH1-225ENST00000551845 BCL9LQ86UU0 1499 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms