RNA–Protein interactions for RNA: ENST00000551837.1

USP44-206, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 2

Gene USP44, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-206ENST00000551837 HIRIP3Q9BW71 556 aaPredicted RBP10.61□□□□□ -0.71
USP44-206ENST00000551837 ASXL1Q8IXJ9 1541 aa10.61□□□□□ -0.71
USP44-206ENST00000551837 EVC2Q86UK5 1308 aa10.6□□□□□ -0.71
USP44-206ENST00000551837 SETD1AO15047 1707 aaKnown RBP10.6□□□□□ -0.71
USP44-206ENST00000551837 PTCH1Q13635 1447 aa10.59□□□□□ -0.71
USP44-206ENST00000551837 ROBO2Q9HCK4 1378 aa10.59□□□□□ -0.71
USP44-206ENST00000551837 IQGAP1P46940 1657 aa10.59□□□□□ -0.71
USP44-206ENST00000551837 WASHC2AQ641Q2 1341 aa10.58□□□□□ -0.71
USP44-206ENST00000551837 WASLO00401 505 aaPredicted RBP10.58□□□□□ -0.72
USP44-206ENST00000551837 STRCQ7RTU9 1775 aa10.57□□□□□ -0.72
USP44-206ENST00000551837 CCDC7Q96M83 1385 aa10.57□□□□□ -0.72
USP44-206ENST00000551837 PROSER2Q86WR7 435 aaPredicted RBP10.57□□□□□ -0.72
USP44-206ENST00000551837 C19orf44Q9H6X5 657 aa10.57□□□□□ -0.72
USP44-206ENST00000551837 KIF7Q2M1P5 1343 aa10.57□□□□□ -0.72
USP44-206ENST00000551837 POLR1AO95602 1720 aaPredicted RBP10.56□□□□□ -0.72
USP44-206ENST00000551837 CDK19Q9BWU1 502 aa10.56□□□□□ -0.72
USP44-206ENST00000551837 CPS1P31327 1500 aa10.56□□□□□ -0.72
USP44-206ENST00000551837 PLEKHH1Q9ULM0 1364 aa10.55□□□□□ -0.72
USP44-206ENST00000551837 CCDC61Q9Y6R9 512 aa10.55□□□□□ -0.72
USP44-206ENST00000551837 CHD2O14647 1828 aaKnown RBP10.55□□□□□ -0.72
USP44-206ENST00000551837 MINK1Q8N4C8 1332 aaPredicted RBP10.55□□□□□ -0.72
USP44-206ENST00000551837 KNDC1Q76NI1 1749 aa10.54□□□□□ -0.72
USP44-206ENST00000551837 NKTRP30414 1462 aaKnown RBP10.54□□□□□ -0.72
USP44-206ENST00000551837 NINLQ9Y2I6 1382 aa10.53□□□□□ -0.72
USP44-206ENST00000551837 PLEKHG3A1L390 1219 aa10.53□□□□□ -0.72
USP44-206ENST00000551837 PER1O15534 1290 aaPredicted RBP10.53□□□□□ -0.72
USP44-206ENST00000551837 SAFB2Q14151 953 aaKnown RBP eCLIP10.53□□□□□ -0.72
USP44-206ENST00000551837 ZNF692Q9BU19 519 aaPredicted RBP10.53□□□□□ -0.72
USP44-206ENST00000551837 XRN1Q8IZH2 1706 aaKnown RBP10.53□□□□□ -0.72
USP44-206ENST00000551837 ATAD2Q6PL18 1390 aa10.52□□□□□ -0.72
USP44-206ENST00000551837 DISP3Q9P2K9 1392 aa10.52□□□□□ -0.72
USP44-206ENST00000551837 NWD1Q149M9 1564 aa10.52□□□□□ -0.72
USP44-206ENST00000551837 DDX10Q13206 875 aaKnown RBP10.52□□□□□ -0.73
USP44-206ENST00000551837 NUDT16Q96DE0 195 aaKnown RBP10.52□□□□□ -0.73
USP44-206ENST00000551837 ZNF335Q9H4Z2 1342 aaPredicted RBP10.52□□□□□ -0.73
USP44-206ENST00000551837 ARHGEF28Q8N1W1 1705 aaKnown RBP10.51□□□□□ -0.73
USP44-206ENST00000551837 SRPK2P78362 688 aaKnown RBP10.51□□□□□ -0.73
USP44-206ENST00000551837 CADPS2Q86UW7 1296 aa10.51□□□□□ -0.73
USP44-206ENST00000551837 CABP2Q9NPB3 220 aa10.51□□□□□ -0.73
USP44-206ENST00000551837 SLC12A5Q9H2X9 1139 aa10.5□□□□□ -0.73
USP44-206ENST00000551837 TMEM94Q12767 1356 aa10.5□□□□□ -0.73
USP44-206ENST00000551837 PANK3Q9H999 370 aa10.49□□□□□ -0.73
USP44-206ENST00000551837 CABP1Q9NZU7 370 aa10.49□□□□□ -0.73
USP44-206ENST00000551837 DCCP43146 1447 aa10.49□□□□□ -0.73
USP44-206ENST00000551837 ANKARQ7Z5J8 1434 aa10.49□□□□□ -0.73
USP44-206ENST00000551837 ADGRL3Q9HAR2 1447 aa10.49□□□□□ -0.73
USP44-206ENST00000551837 ADGRB2O60241 1585 aa10.48□□□□□ -0.73
USP44-206ENST00000551837 DIEXFQ68CQ4 756 aaKnown RBP10.48□□□□□ -0.73
USP44-206ENST00000551837 TERF2IPQ9NYB0 399 aa10.48□□□□□ -0.73
USP44-206ENST00000551837 LRRC7Q96NW7 1537 aa10.48□□□□□ -0.73
USP44-206ENST00000551837 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.47□□□□□ -0.73
USP44-206ENST00000551837 ATF3P18847 181 aa10.47□□□□□ -0.73
USP44-206ENST00000551837 TULP4Q9NRJ4 1543 aa10.47□□□□□ -0.73
USP44-206ENST00000551837 HDGFL2Q7Z4V5 671 aaPredicted RBP10.46□□□□□ -0.73
USP44-206ENST00000551837 C14orf37Q86TY3 774 aa10.46□□□□□ -0.73
USP44-206ENST00000551837 TMC1Q8TDI8 760 aa10.46□□□□□ -0.73
USP44-206ENST00000551837 RBM33Q96EV2 1170 aaKnown RBP10.46□□□□□ -0.73
USP44-206ENST00000551837 CARD14Q9BXL6 1004 aa10.46□□□□□ -0.73
USP44-206ENST00000551837 PRR36Q9H6K5 1346 aa10.46□□□□□ -0.73
USP44-206ENST00000551837 BRD4O60885 1362 aaPredicted RBP10.46□□□□□ -0.74
USP44-206ENST00000551837 MSH6P52701 1360 aa10.46□□□□□ -0.74
USP44-206ENST00000551837 QRICH2Q9H0J4 1663 aa10.46□□□□□ -0.74
USP44-206ENST00000551837 CPSF1Q10570 1443 aaKnown RBP10.45□□□□□ -0.74
USP44-206ENST00000551837 ANKRD36BQ8N2N9 1353 aa10.45□□□□□ -0.74
USP44-206ENST00000551837 NPC1L1Q9UHC9 1359 aa10.45□□□□□ -0.74
USP44-206ENST00000551837 SLAIN2Q9P270 581 aa10.45□□□□□ -0.74
USP44-206ENST00000551837 POLR3AO14802 1390 aaPredicted RBP10.44□□□□□ -0.74
USP44-206ENST00000551837 POLR3GLQ9BT43 218 aa10.44□□□□□ -0.74
USP44-206ENST00000551837 KNSTRNQ9Y448 316 aa10.44□□□□□ -0.74
USP44-206ENST00000551837 LTBP4Q8N2S1 1624 aa10.44□□□□□ -0.74
USP44-206ENST00000551837 CDC42BPGQ6DT37 1551 aa10.43□□□□□ -0.74
USP44-206ENST00000551837 PHF8Q9UPP1 1060 aa10.43□□□□□ -0.74
USP44-206ENST00000551837 PPIP5K1Q6PFW1 1433 aa10.42□□□□□ -0.74
USP44-206ENST00000551837 STRCP1A6NGW2 1772 aa10.42□□□□□ -0.74
USP44-206ENST00000551837 KTN1Q86UP2 1357 aaKnown RBP10.42□□□□□ -0.74
USP44-206ENST00000551837 ACEP12821 1306 aa10.42□□□□□ -0.74
USP44-206ENST00000551837 NCBP3Q53F19 620 aaKnown RBP10.42□□□□□ -0.74
USP44-206ENST00000551837 ESCO1Q5FWF5 840 aa10.42□□□□□ -0.74
USP44-206ENST00000551837 AMER1Q5JTC6 1135 aaPredicted RBP10.42□□□□□ -0.74
USP44-206ENST00000551837 ATP7BP35670 1465 aa10.42□□□□□ -0.74
USP44-206ENST00000551837 ORAI2Q96SN7 254 aa10.41□□□□□ -0.74
USP44-206ENST00000551837 IQSEC2Q5JU85 1478 aa10.41□□□□□ -0.74
USP44-206ENST00000551837 C1orf167Q5SNV9 1468 aa10.41□□□□□ -0.74
USP44-206ENST00000551837 NUTM2FA1L443 756 aa10.4□□□□□ -0.74
USP44-206ENST00000551837 FYB1O15117 783 aa10.4□□□□□ -0.74
USP44-206ENST00000551837 ANP32CO43423 234 aa10.4□□□□□ -0.74
USP44-206ENST00000551837 TOM1O60784 492 aa10.4□□□□□ -0.74
USP44-206ENST00000551837 RALBP1Q15311 655 aa10.4□□□□□ -0.74
USP44-206ENST00000551837 NGDNQ8NEJ9 315 aaKnown RBP10.4□□□□□ -0.74
USP44-206ENST00000551837 CD163L1Q9NR16 1453 aa10.4□□□□□ -0.74
USP44-206ENST00000551837 MST1RQ04912 1400 aa10.4□□□□□ -0.75
USP44-206ENST00000551837 SSH2Q76I76 1423 aa10.4□□□□□ -0.75
USP44-206ENST00000551837 CGNL1Q0VF96 1302 aa10.39□□□□□ -0.75
USP44-206ENST00000551837 TTC21AQ8NDW8 1320 aa10.39□□□□□ -0.75
USP44-206ENST00000551837 PSME1Q06323 249 aa10.39□□□□□ -0.75
USP44-206ENST00000551837 PMFBP1Q8TBY8 1022 aa10.39□□□□□ -0.75
USP44-206ENST00000551837 CERKQ8TCT0 537 aa10.39□□□□□ -0.75
USP44-206ENST00000551837 PRKRIP1Q9H875 184 aaPredicted RBP10.39□□□□□ -0.75
USP44-206ENST00000551837 A0A1W2PP64 1363 aa10.38□□□□□ -0.75
USP44-206ENST00000551837 NSD2O96028 1365 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms