RNA–Protein interactions for RNA: ENST00000551711.5

RNF41-209, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-209ENST00000551711 CCDC125Q86Z20 511 aa11.97□□□□□ -0.49
RNF41-209ENST00000551711 PSDA5PKW4 1024 aaPredicted RBP11.95□□□□□ -0.5
RNF41-209ENST00000551711 NEXMIFQ5QGS0 1516 aa11.95□□□□□ -0.5
RNF41-209ENST00000551711 MYOM2P54296 1465 aa11.95□□□□□ -0.5
RNF41-209ENST00000551711 WAPLQ7Z5K2 1190 aa11.94□□□□□ -0.5
RNF41-209ENST00000551711 STK26Q9P289 416 aa11.94□□□□□ -0.5
RNF41-209ENST00000551711 NPHP3Q7Z494 1330 aa11.93□□□□□ -0.5
RNF41-209ENST00000551711 VGFO15240 615 aaPredicted RBP11.93□□□□□ -0.5
RNF41-209ENST00000551711 UNC5CLQ8IV45 518 aa11.93□□□□□ -0.5
RNF41-209ENST00000551711 SEPT12Q8IYM1 358 aa11.93□□□□□ -0.5
RNF41-209ENST00000551711 CLTCL1P53675 1640 aa11.93□□□□□ -0.5
RNF41-209ENST00000551711 RALGAPBQ86X10 1494 aa11.92□□□□□ -0.5
RNF41-209ENST00000551711 SF3B2Q13435 895 aaKnown RBP11.92□□□□□ -0.5
RNF41-209ENST00000551711 CABLES1Q8TDN4 633 aa11.92□□□□□ -0.5
RNF41-209ENST00000551711 CCDC9Q9Y3X0 531 aaKnown RBP11.92□□□□□ -0.5
RNF41-209ENST00000551711 BLMP54132 1417 aaPredicted RBP11.92□□□□□ -0.5
RNF41-209ENST00000551711 PXDNQ92626 1479 aa11.91□□□□□ -0.5
RNF41-209ENST00000551711 LAMC1P11047 1609 aa11.91□□□□□ -0.5
RNF41-209ENST00000551711 SPHKAPQ2M3C7 1700 aa11.91□□□□□ -0.5
RNF41-209ENST00000551711 COL22A1Q8NFW1 1626 aaPredicted RBP11.89□□□□□ -0.51
RNF41-209ENST00000551711 GLI3P10071 1580 aa11.89□□□□□ -0.51
RNF41-209ENST00000551711 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
RNF41-209ENST00000551711 TMEM132EQ6IEE7 984 aa11.89□□□□□ -0.51
RNF41-209ENST00000551711 KRT28Q7Z3Y7 464 aa11.89□□□□□ -0.51
RNF41-209ENST00000551711 HFM1A2PYH4 1435 aa11.88□□□□□ -0.51
RNF41-209ENST00000551711 A0A0G2JS52 829 aa11.88□□□□□ -0.51
RNF41-209ENST00000551711 MYT1Q01538 1121 aa11.88□□□□□ -0.51
RNF41-209ENST00000551711 LMOD2Q6P5Q4 547 aa11.88□□□□□ -0.51
RNF41-209ENST00000551711 EP400Q96L91 3159 aa11.88□□□□□ -0.51
RNF41-209ENST00000551711 PLEKHH1Q9ULM0 1364 aa11.88□□□□□ -0.51
RNF41-209ENST00000551711 SPATA31A3Q5VYP0 1347 aa11.87□□□□□ -0.51
RNF41-209ENST00000551711 NAIPQ13075 1403 aa11.87□□□□□ -0.51
RNF41-209ENST00000551711 FAM182BQ5T319 152 aa11.87□□□□□ -0.51
RNF41-209ENST00000551711 KRT27Q7Z3Y8 459 aa11.87□□□□□ -0.51
RNF41-209ENST00000551711 ADGRF5Q8IZF2 1346 aa11.86□□□□□ -0.51
RNF41-209ENST00000551711 SLIT2O94813 1529 aa11.86□□□□□ -0.51
RNF41-209ENST00000551711 HRCP23327 699 aa11.86□□□□□ -0.51
RNF41-209ENST00000551711 VPS72Q15906 364 aa11.86□□□□□ -0.51
RNF41-209ENST00000551711 RGL3Q3MIN7 710 aa11.86□□□□□ -0.51
RNF41-209ENST00000551711 RPGRIP1LQ68CZ1 1315 aa11.86□□□□□ -0.51
RNF41-209ENST00000551711 LRPPRCP42704 1394 aaKnown RBP11.85□□□□□ -0.51
RNF41-209ENST00000551711 EN1Q05925 392 aaPredicted RBP11.85□□□□□ -0.51
RNF41-209ENST00000551711 FAM83GA6ND36 823 aa11.84□□□□□ -0.51
RNF41-209ENST00000551711 FAM98CQ17RN3 349 aaKnown RBP11.84□□□□□ -0.51
RNF41-209ENST00000551711 R3HDM1Q15032 1099 aaKnown RBP11.83□□□□□ -0.52
RNF41-209ENST00000551711 SLC4A1APQ9BWU0 796 aaKnown RBP11.83□□□□□ -0.52
RNF41-209ENST00000551711 BRWD3Q6RI45 1802 aa11.83□□□□□ -0.52
RNF41-209ENST00000551711 KIF1BO60333 1816 aa11.82□□□□□ -0.52
RNF41-209ENST00000551711 ONECUT3O60422 494 aaPredicted RBP11.82□□□□□ -0.52
RNF41-209ENST00000551711 BAG6P46379 1132 aa11.82□□□□□ -0.52
RNF41-209ENST00000551711 SAFB2Q14151 953 aaKnown RBP eCLIP11.82□□□□□ -0.52
RNF41-209ENST00000551711 PHF8Q9UPP1 1060 aa11.82□□□□□ -0.52
RNF41-209ENST00000551711 PRAG1Q86YV5 1406 aa11.82□□□□□ -0.52
RNF41-209ENST00000551711 CDC42BPGQ6DT37 1551 aa11.82□□□□□ -0.52
RNF41-209ENST00000551711 MARF1Q9Y4F3 1742 aaKnown RBP11.82□□□□□ -0.52
RNF41-209ENST00000551711 PSME1Q06323 249 aa11.8□□□□□ -0.52
RNF41-209ENST00000551711 PMFBP1Q8TBY8 1022 aa11.8□□□□□ -0.52
RNF41-209ENST00000551711 EZH2Q15910 746 aaKnown RBP11.79□□□□□ -0.52
RNF41-209ENST00000551711 BTG4Q9NY30 223 aa11.79□□□□□ -0.52
RNF41-209ENST00000551711 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.79□□□□□ -0.52
RNF41-209ENST00000551711 USP32Q8NFA0 1604 aa11.78□□□□□ -0.52
RNF41-209ENST00000551711 CCDC144AA2RUR9 1427 aa11.78□□□□□ -0.52
RNF41-209ENST00000551711 LRP5O75197 1615 aa11.78□□□□□ -0.52
RNF41-209ENST00000551711 ABCC11Q96J66 1382 aa11.78□□□□□ -0.52
RNF41-209ENST00000551711 TNS3Q68CZ2 1445 aa11.77□□□□□ -0.52
RNF41-209ENST00000551711 RRBP1Q9P2E9 1410 aaKnown RBP11.77□□□□□ -0.53
RNF41-209ENST00000551711 PPLO60437 1756 aa11.76□□□□□ -0.53
RNF41-209ENST00000551711 TECPR2O15040 1411 aa11.76□□□□□ -0.53
RNF41-209ENST00000551711 CFAP70Q5T0N1 1121 aa11.75□□□□□ -0.53
RNF41-209ENST00000551711 YTHDC2Q9H6S0 1430 aaKnown RBP11.75□□□□□ -0.53
RNF41-209ENST00000551711 TRIM37O94972 964 aa11.74□□□□□ -0.53
RNF41-209ENST00000551711 PRAM1Q96QH2 718 aa11.74□□□□□ -0.53
RNF41-209ENST00000551711 SBNO1A3KN83 1393 aa11.74□□□□□ -0.53
RNF41-209ENST00000551711 PLCH1Q4KWH8 1693 aa11.74□□□□□ -0.53
RNF41-209ENST00000551711 FMN2Q9NZ56 1722 aa11.74□□□□□ -0.53
RNF41-209ENST00000551711 YY1P25490 414 aa11.73□□□□□ -0.53
RNF41-209ENST00000551711 HIRIP3Q9BW71 556 aaPredicted RBP11.73□□□□□ -0.53
RNF41-209ENST00000551711 ARHGEF10O15013 1369 aa11.72□□□□□ -0.53
RNF41-209ENST00000551711 SPATA31A5Q5VU36 1347 aa11.72□□□□□ -0.53
RNF41-209ENST00000551711 SPATA31A7Q8IWB4 1347 aa11.72□□□□□ -0.53
RNF41-209ENST00000551711 APBA3O96018 575 aa11.72□□□□□ -0.53
RNF41-209ENST00000551711 CAMKK2Q96RR4 588 aa11.72□□□□□ -0.53
RNF41-209ENST00000551711 SPATA31E1Q6ZUB1 1445 aa11.71□□□□□ -0.53
RNF41-209ENST00000551711 ANKRD30BQ9BXX2 1392 aa11.71□□□□□ -0.53
RNF41-209ENST00000551711 PAK3O75914 559 aaPredicted RBP11.71□□□□□ -0.53
RNF41-209ENST00000551711 CHRNA2Q15822 529 aa11.71□□□□□ -0.53
RNF41-209ENST00000551711 C14orf93Q9H972 538 aaKnown RBP11.71□□□□□ -0.53
RNF41-209ENST00000551711 STRN4Q9NRL3 753 aa11.71□□□□□ -0.53
RNF41-209ENST00000551711 POGKQ9P215 609 aa11.71□□□□□ -0.53
RNF41-209ENST00000551711 RGPD8O14715 1765 aaPredicted RBP11.71□□□□□ -0.54
RNF41-209ENST00000551711 KIF1AQ12756 1690 aa11.71□□□□□ -0.54
RNF41-209ENST00000551711 NRXN1Q9ULB1 1477 aa11.7□□□□□ -0.54
RNF41-209ENST00000551711 SIRT1Q96EB6 747 aa11.7□□□□□ -0.54
RNF41-209ENST00000551711 USP35Q9P2H5 1018 aa11.7□□□□□ -0.54
RNF41-209ENST00000551711 PIK3C2GO75747 1445 aa11.69□□□□□ -0.54
RNF41-209ENST00000551711 MINK1Q8N4C8 1332 aaPredicted RBP11.69□□□□□ -0.54
RNF41-209ENST00000551711 MPHOSPH9Q99550 1183 aa11.69□□□□□ -0.54
RNF41-209ENST00000551711 PRDM11Q9NQV5 511 aa11.69□□□□□ -0.54
RNF41-209ENST00000551711 NWD2Q9ULI1 1742 aa11.69□□□□□ -0.54
RNF41-209ENST00000551711 DHX57Q6P158 1386 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms