RNA–Protein interactions for RNA: ENST00000551705.1

TMEM106C-217, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 666 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-217ENST00000551705 PXDNQ92626 1479 aa20.87■□□□□ 0.93
TMEM106C-217ENST00000551705 PSDA5PKW4 1024 aaPredicted RBP20.84■□□□□ 0.93
TMEM106C-217ENST00000551705 PLCH1Q4KWH8 1693 aa20.83■□□□□ 0.92
TMEM106C-217ENST00000551705 SLIT2O94813 1529 aa20.82■□□□□ 0.92
TMEM106C-217ENST00000551705 ROBO2Q9HCK4 1378 aa20.82■□□□□ 0.92
TMEM106C-217ENST00000551705 CLTCL1P53675 1640 aa20.82■□□□□ 0.92
TMEM106C-217ENST00000551705 USP32Q8NFA0 1604 aa20.82■□□□□ 0.92
TMEM106C-217ENST00000551705 CDC42BPGQ6DT37 1551 aa20.8■□□□□ 0.92
TMEM106C-217ENST00000551705 HRCP23327 699 aa20.78■□□□□ 0.92
TMEM106C-217ENST00000551705 ZNF326Q5BKZ1 582 aaKnown RBP20.78■□□□□ 0.92
TMEM106C-217ENST00000551705 KIF1BO60333 1816 aa20.77■□□□□ 0.92
TMEM106C-217ENST00000551705 XPCQ01831 940 aaPredicted RBP20.77■□□□□ 0.92
TMEM106C-217ENST00000551705 SF3B2Q13435 895 aaKnown RBP20.77■□□□□ 0.92
TMEM106C-217ENST00000551705 FAM50AQ14320 339 aaKnown RBP20.77■□□□□ 0.92
TMEM106C-217ENST00000551705 ABCA3Q99758 1704 aa20.76■□□□□ 0.91
TMEM106C-217ENST00000551705 PRAG1Q86YV5 1406 aa20.76■□□□□ 0.91
TMEM106C-217ENST00000551705 NWD2Q9ULI1 1742 aa20.75■□□□□ 0.91
TMEM106C-217ENST00000551705 UNC5CLQ8IV45 518 aa20.75■□□□□ 0.91
TMEM106C-217ENST00000551705 RGPD1P0DJD0 1748 aa20.75■□□□□ 0.91
TMEM106C-217ENST00000551705 NPHP3Q7Z494 1330 aa20.75■□□□□ 0.91
TMEM106C-217ENST00000551705 SEPT12Q8IYM1 358 aa20.73■□□□□ 0.91
TMEM106C-217ENST00000551705 TNS1Q9HBL0 1735 aaKnown RBP20.73■□□□□ 0.91
TMEM106C-217ENST00000551705 NUP155O75694 1391 aa20.72■□□□□ 0.91
TMEM106C-217ENST00000551705 ESCO1Q5FWF5 840 aa20.7■□□□□ 0.9
TMEM106C-217ENST00000551705 LOC105371045A0A1W2PR82 267 aa20.69■□□□□ 0.9
TMEM106C-217ENST00000551705 FOXO3O43524 673 aa20.69■□□□□ 0.9
TMEM106C-217ENST00000551705 APLP2Q06481 763 aa20.69■□□□□ 0.9
TMEM106C-217ENST00000551705 HFM1A2PYH4 1435 aa20.69■□□□□ 0.9
TMEM106C-217ENST00000551705 NRAPQ86VF7 1730 aa20.68■□□□□ 0.9
TMEM106C-217ENST00000551705 KIF1AQ12756 1690 aa20.67■□□□□ 0.9
TMEM106C-217ENST00000551705 FMN2Q9NZ56 1722 aa20.67■□□□□ 0.9
TMEM106C-217ENST00000551705 PPLO60437 1756 aa20.66■□□□□ 0.9
TMEM106C-217ENST00000551705 BAG6P46379 1132 aa20.65■□□□□ 0.9
TMEM106C-217ENST00000551705 KRT27Q7Z3Y8 459 aa20.65■□□□□ 0.9
TMEM106C-217ENST00000551705 RGPD8O14715 1765 aaPredicted RBP20.64■□□□□ 0.9
TMEM106C-217ENST00000551705 ROCK1Q13464 1354 aa20.64■□□□□ 0.89
TMEM106C-217ENST00000551705 R3HDM1Q15032 1099 aaKnown RBP20.64■□□□□ 0.89
TMEM106C-217ENST00000551705 VPS72Q15906 364 aa20.63■□□□□ 0.89
TMEM106C-217ENST00000551705 NAIPQ13075 1403 aa20.62■□□□□ 0.89
TMEM106C-217ENST00000551705 YY1P25490 414 aa20.62■□□□□ 0.89
TMEM106C-217ENST00000551705 SPATA31A3Q5VYP0 1347 aa20.61■□□□□ 0.89
TMEM106C-217ENST00000551705 NUTM2FA1L443 756 aa20.61■□□□□ 0.89
TMEM106C-217ENST00000551705 EN1Q05925 392 aaPredicted RBP20.61■□□□□ 0.89
TMEM106C-217ENST00000551705 IFT172Q9UG01 1749 aa20.61■□□□□ 0.89
TMEM106C-217ENST00000551705 LRPPRCP42704 1394 aaKnown RBP20.6■□□□□ 0.89
TMEM106C-217ENST00000551705 CCDC9Q9Y3X0 531 aaKnown RBP20.6■□□□□ 0.89
TMEM106C-217ENST00000551705 ONECUT3O60422 494 aaPredicted RBP20.59■□□□□ 0.89
TMEM106C-217ENST00000551705 KNDC1Q76NI1 1749 aa20.58■□□□□ 0.89
TMEM106C-217ENST00000551705 CCDC144AA2RUR9 1427 aa20.58■□□□□ 0.88
TMEM106C-217ENST00000551705 A0A0G2JS52 829 aa20.57■□□□□ 0.88
TMEM106C-217ENST00000551705 MYT1Q01538 1121 aa20.57■□□□□ 0.88
TMEM106C-217ENST00000551705 TNS3Q68CZ2 1445 aa20.57■□□□□ 0.88
TMEM106C-217ENST00000551705 ADGRB2O60241 1585 aa20.56■□□□□ 0.88
TMEM106C-217ENST00000551705 DISP2A7MBM2 1401 aa20.56■□□□□ 0.88
TMEM106C-217ENST00000551705 PLEKHG5O94827 1062 aa20.56■□□□□ 0.88
TMEM106C-217ENST00000551705 CABLES1Q8TDN4 633 aa20.56■□□□□ 0.88
TMEM106C-217ENST00000551705 RREB1Q92766 1687 aa20.56■□□□□ 0.88
TMEM106C-217ENST00000551705 THSD7AQ9UPZ6 1657 aa20.56■□□□□ 0.88
TMEM106C-217ENST00000551705 NUP188Q5SRE5 1749 aa20.55■□□□□ 0.88
TMEM106C-217ENST00000551705 FAM182BQ5T319 152 aa20.54■□□□□ 0.88
TMEM106C-217ENST00000551705 CAMTA1Q9Y6Y1 1673 aa20.54■□□□□ 0.88
TMEM106C-217ENST00000551705 HAP1P54257 671 aaPredicted RBP20.53■□□□□ 0.88
TMEM106C-217ENST00000551705 FAM98CQ17RN3 349 aaKnown RBP20.52■□□□□ 0.88
TMEM106C-217ENST00000551705 PLEKHH1Q9ULM0 1364 aa20.5■□□□□ 0.87
TMEM106C-217ENST00000551705 VGFO15240 615 aaPredicted RBP20.5■□□□□ 0.87
TMEM106C-217ENST00000551705 TECPR2O15040 1411 aa20.5■□□□□ 0.87
TMEM106C-217ENST00000551705 COL14A1Q05707 1796 aaKnown RBP20.49■□□□□ 0.87
TMEM106C-217ENST00000551705 EZH2Q15910 746 aaKnown RBP20.49■□□□□ 0.87
TMEM106C-217ENST00000551705 KRT28Q7Z3Y7 464 aa20.49■□□□□ 0.87
TMEM106C-217ENST00000551705 WAPLQ7Z5K2 1190 aa20.49■□□□□ 0.87
TMEM106C-217ENST00000551705 TRPM3Q9HCF6 1732 aaPredicted RBP20.47■□□□□ 0.87
TMEM106C-217ENST00000551705 CRYBG1Q9Y4K1 1723 aa20.47■□□□□ 0.87
TMEM106C-217ENST00000551705 ITGAEP38570 1179 aa20.45■□□□□ 0.86
TMEM106C-217ENST00000551705 FAM83GA6ND36 823 aa20.44■□□□□ 0.86
TMEM106C-217ENST00000551705 STK26Q9P289 416 aa20.44■□□□□ 0.86
TMEM106C-217ENST00000551705 ALS2Q96Q42 1657 aa20.44■□□□□ 0.86
TMEM106C-217ENST00000551705 NRXN1Q9ULB1 1477 aa20.43■□□□□ 0.86
TMEM106C-217ENST00000551705 LMOD2Q6P5Q4 547 aa20.41■□□□□ 0.86
TMEM106C-217ENST00000551705 CAMKK2Q96RR4 588 aa20.41■□□□□ 0.86
TMEM106C-217ENST00000551705 BTG4Q9NY30 223 aa20.41■□□□□ 0.86
TMEM106C-217ENST00000551705 SBNO1A3KN83 1393 aa20.41■□□□□ 0.86
TMEM106C-217ENST00000551705 ARHGEF10O15013 1369 aa20.41■□□□□ 0.86
TMEM106C-217ENST00000551705 RPGRIP1LQ68CZ1 1315 aa20.39■□□□□ 0.85
TMEM106C-217ENST00000551705 PHF8Q9UPP1 1060 aa20.39■□□□□ 0.85
TMEM106C-217ENST00000551705 RRBP1Q9P2E9 1410 aaKnown RBP20.38■□□□□ 0.85
TMEM106C-217ENST00000551705 SPATA31A5Q5VU36 1347 aa20.38■□□□□ 0.85
TMEM106C-217ENST00000551705 SPATA31A7Q8IWB4 1347 aa20.38■□□□□ 0.85
TMEM106C-217ENST00000551705 TRIM37O94972 964 aa20.38■□□□□ 0.85
TMEM106C-217ENST00000551705 ADGRF5Q8IZF2 1346 aa20.37■□□□□ 0.85
TMEM106C-217ENST00000551705 PARD3Q8TEW0 1356 aa20.36■□□□□ 0.85
TMEM106C-217ENST00000551705 NINLQ9Y2I6 1382 aa20.36■□□□□ 0.85
TMEM106C-217ENST00000551705 PSME1Q06323 249 aa20.36■□□□□ 0.85
TMEM106C-217ENST00000551705 ABCC11Q96J66 1382 aa20.35■□□□□ 0.85
TMEM106C-217ENST00000551705 TMEM132EQ6IEE7 984 aa20.34■□□□□ 0.85
TMEM106C-217ENST00000551705 PPP1R1BQ9UD71 204 aaPredicted RBP20.34■□□□□ 0.85
TMEM106C-217ENST00000551705 CASZ1Q86V15 1759 aa20.34■□□□□ 0.85
TMEM106C-217ENST00000551705 NRKQ7Z2Y5 1582 aa20.34■□□□□ 0.85
TMEM106C-217ENST00000551705 YTHDC2Q9H6S0 1430 aaKnown RBP20.33■□□□□ 0.84
TMEM106C-217ENST00000551705 APBA3O96018 575 aa20.32■□□□□ 0.84
TMEM106C-217ENST00000551705 MYOM1P52179 1685 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms