RNA–Protein interactions for RNA: ENST00000551634.5

NPAS3-211, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5

Gene NPAS3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-211ENST00000551634 RUNDC1Q96C34 613 aa30.45■■■□□ 2.47
NPAS3-211ENST00000551634 NOS1P29475 1434 aa30.44■■■□□ 2.46
NPAS3-211ENST00000551634 USP32Q8NFA0 1604 aa30.43■■■□□ 2.46
NPAS3-211ENST00000551634 ZC3H13Q5T200 1668 aaKnown RBP30.43■■■□□ 2.46
NPAS3-211ENST00000551634 CANXP27824 592 aaKnown RBP30.43■■■□□ 2.46
NPAS3-211ENST00000551634 PHF23Q9BUL5 403 aaPredicted RBP30.43■■■□□ 2.46
NPAS3-211ENST00000551634 KIDINS220Q9ULH0 1771 aa30.43■■■□□ 2.46
NPAS3-211ENST00000551634 IQSEC2Q5JU85 1478 aa30.42■■■□□ 2.46
NPAS3-211ENST00000551634 NCBP3Q53F19 620 aaKnown RBP30.41■■■□□ 2.46
NPAS3-211ENST00000551634 WDR63Q8IWG1 891 aa30.41■■■□□ 2.46
NPAS3-211ENST00000551634 C14orf93Q9H972 538 aaKnown RBP30.4■■■□□ 2.46
NPAS3-211ENST00000551634 COG6Q9Y2V7 657 aa30.39■■■□□ 2.46
NPAS3-211ENST00000551634 IL27Q8NEV9 243 aa30.39■■■□□ 2.46
NPAS3-211ENST00000551634 ZMYM3Q14202 1370 aa30.39■■■□□ 2.46
NPAS3-211ENST00000551634 QRICH2Q9H0J4 1663 aa30.39■■■□□ 2.46
NPAS3-211ENST00000551634 CCDC27Q2M243 656 aa30.38■■■□□ 2.45
NPAS3-211ENST00000551634 PANK1Q8TE04 598 aa30.38■■■□□ 2.45
NPAS3-211ENST00000551634 PPLO60437 1756 aa30.38■■■□□ 2.45
NPAS3-211ENST00000551634 RARSP54136 660 aaKnown RBP30.38■■■□□ 2.45
NPAS3-211ENST00000551634 PMFBP1Q8TBY8 1022 aa30.38■■■□□ 2.45
NPAS3-211ENST00000551634 USP19O94966 1318 aa30.37■■■□□ 2.45
NPAS3-211ENST00000551634 ADGRB1O14514 1584 aa30.37■■■□□ 2.45
NPAS3-211ENST00000551634 PUS7Q96PZ0 661 aaKnown RBP30.36■■■□□ 2.45
NPAS3-211ENST00000551634 TCP11L2Q8N4U5 519 aa30.36■■■□□ 2.45
NPAS3-211ENST00000551634 ZNF518AQ6AHZ1 1483 aa30.35■■■□□ 2.45
NPAS3-211ENST00000551634 RPGRIP1LQ68CZ1 1315 aa30.35■■■□□ 2.45
NPAS3-211ENST00000551634 SLC12A5Q9H2X9 1139 aa30.34■■■□□ 2.45
NPAS3-211ENST00000551634 TRAK1Q9UPV9 953 aa30.34■■■□□ 2.45
NPAS3-211ENST00000551634 CFAP53Q96M91 514 aa30.33■■■□□ 2.45
NPAS3-211ENST00000551634 FRAT1Q92837 279 aaPredicted RBP30.31■■■□□ 2.44
NPAS3-211ENST00000551634 NPATQ14207 1427 aa30.3■■■□□ 2.44
NPAS3-211ENST00000551634 NSD2O96028 1365 aa30.3■■■□□ 2.44
NPAS3-211ENST00000551634 ASXL2Q76L83 1435 aa30.28■■■□□ 2.44
NPAS3-211ENST00000551634 CHGAP10645 457 aaKnown RBP30.28■■■□□ 2.44
NPAS3-211ENST00000551634 NEUROD2Q15784 382 aa30.28■■■□□ 2.44
NPAS3-211ENST00000551634 BECN1Q14457 450 aa30.28■■■□□ 2.44
NPAS3-211ENST00000551634 MTHFSP49914 203 aa30.27■■■□□ 2.44
NPAS3-211ENST00000551634 RRP7AQ9Y3A4 280 aaKnown RBP30.27■■■□□ 2.44
NPAS3-211ENST00000551634 FRAT2O75474 233 aaPredicted RBP30.26■■■□□ 2.44
NPAS3-211ENST00000551634 TNNT2P45379 298 aaPredicted RBP30.26■■■□□ 2.43
NPAS3-211ENST00000551634 MYH16Q9H6N6 1097 aa30.25■■■□□ 2.43
NPAS3-211ENST00000551634 NLRP1Q9C000 1473 aa30.24■■■□□ 2.43
NPAS3-211ENST00000551634 ANKRD36BQ8N2N9 1353 aa30.23■■■□□ 2.43
NPAS3-211ENST00000551634 PCDHB15Q9Y5E8 787 aa30.23■■■□□ 2.43
NPAS3-211ENST00000551634 SEC24BO95487 1268 aa30.22■■■□□ 2.43
NPAS3-211ENST00000551634 RLBP1P12271 317 aa30.21■■■□□ 2.43
NPAS3-211ENST00000551634 RWDD1Q9H446 243 aaPredicted RBP30.21■■■□□ 2.43
NPAS3-211ENST00000551634 EVC2Q86UK5 1308 aa30.21■■■□□ 2.43
NPAS3-211ENST00000551634 MLH3Q9UHC1 1453 aa30.21■■■□□ 2.43
NPAS3-211ENST00000551634 CT47B1P0C2W7 299 aaPredicted RBP30.21■■■□□ 2.43
NPAS3-211ENST00000551634 ADGRB2O60241 1585 aa30.2■■■□□ 2.42
NPAS3-211ENST00000551634 HECW2Q9P2P5 1572 aa30.2■■■□□ 2.42
NPAS3-211ENST00000551634 TMEM132EQ6IEE7 984 aa30.19■■■□□ 2.42
NPAS3-211ENST00000551634 UPF2Q9HAU5 1272 aaKnown RBP30.19■■■□□ 2.42
NPAS3-211ENST00000551634 GLI2P10070 1586 aa30.19■■■□□ 2.42
NPAS3-211ENST00000551634 FRMPD1Q5SYB0 1578 aa30.18■■■□□ 2.42
NPAS3-211ENST00000551634 CFAP74Q9C0B2 1584 aa30.18■■■□□ 2.42
NPAS3-211ENST00000551634 TRHP20396 242 aaPredicted RBP30.17■■■□□ 2.42
NPAS3-211ENST00000551634 PDZRN3Q9UPQ7 1066 aa30.16■■■□□ 2.42
NPAS3-211ENST00000551634 POGZQ7Z3K3 1410 aa30.16■■■□□ 2.42
NPAS3-211ENST00000551634 ARHGEF28Q8N1W1 1705 aaKnown RBP30.15■■■□□ 2.42
NPAS3-211ENST00000551634 TULP4Q9NRJ4 1543 aa30.15■■■□□ 2.42
NPAS3-211ENST00000551634 BRPF3Q9ULD4 1205 aa30.15■■■□□ 2.42
NPAS3-211ENST00000551634 CFAP65Q6ZU64 1925 aaKnown RBP30.14■■■□□ 2.42
NPAS3-211ENST00000551634 MVPQ14764 893 aaKnown RBP30.14■■■□□ 2.42
NPAS3-211ENST00000551634 ABCC3O15438 1527 aa30.14■■■□□ 2.42
NPAS3-211ENST00000551634 TBC1D32Q96NH3 1257 aa30.13■■■□□ 2.41
NPAS3-211ENST00000551634 VGFO15240 615 aaPredicted RBP30.13■■■□□ 2.41
NPAS3-211ENST00000551634 TNNQ9UQP3 1299 aa30.13■■■□□ 2.41
NPAS3-211ENST00000551634 U2AF1L5P0DN76 240 aaPredicted RBP30.12■■■□□ 2.41
NPAS3-211ENST00000551634 U2AF1Q01081 240 aaKnown RBP eCLIP30.12■■■□□ 2.41
NPAS3-211ENST00000551634 ZKSCAN2Q63HK3 967 aa30.12■■■□□ 2.41
NPAS3-211ENST00000551634 GGT6Q6P531 493 aa30.12■■■□□ 2.41
NPAS3-211ENST00000551634 RTN4Q9NQC3 1192 aaKnown RBP30.12■■■□□ 2.41
NPAS3-211ENST00000551634 BCL2L13Q9BXK5 485 aa30.11■■■□□ 2.41
NPAS3-211ENST00000551634 CAMSAP1Q5T5Y3 1602 aa30.1■■■□□ 2.41
NPAS3-211ENST00000551634 PIK3C2BO00750 1634 aa30.1■■■□□ 2.41
NPAS3-211ENST00000551634 DZIP1LQ8IYY4 767 aaKnown RBP30.08■■■□□ 2.41
NPAS3-211ENST00000551634 NEXMIFQ5QGS0 1516 aa30.08■■■□□ 2.41
NPAS3-211ENST00000551634 ABCC11Q96J66 1382 aa30.06■■■□□ 2.4
NPAS3-211ENST00000551634 NPM1P06748 294 aaKnown RBP eCLIP30.06■■■□□ 2.4
NPAS3-211ENST00000551634 ANTXR1Q9H6X2 564 aa30.06■■■□□ 2.4
NPAS3-211ENST00000551634 FTSJ3Q8IY81 847 aaKnown RBP30.05■■■□□ 2.4
NPAS3-211ENST00000551634 CD109Q6YHK3 1445 aa30.04■■■□□ 2.4
NPAS3-211ENST00000551634 ZFYVE9O95405 1425 aa30.02■■■□□ 2.4
NPAS3-211ENST00000551634 SIGLEC1Q9BZZ2 1709 aa30.02■■■□□ 2.4
NPAS3-211ENST00000551634 IL16Q14005 1332 aa30.02■■■□□ 2.4
NPAS3-211ENST00000551634 PLEKHF1Q96S99 279 aa30.02■■■□□ 2.4
NPAS3-211ENST00000551634 HDAC1Q13547 482 aaPredicted RBP30.01■■■□□ 2.39
NPAS3-211ENST00000551634 CABP2Q9NPB3 220 aa30■■■□□ 2.39
NPAS3-211ENST00000551634 SLKQ9H2G2 1235 aaPredicted RBP30■■■□□ 2.39
NPAS3-211ENST00000551634 TMPOP42166 694 aaKnown RBP29.99■■■□□ 2.39
NPAS3-211ENST00000551634 TBC1D2Q9BYX2 928 aa29.99■■■□□ 2.39
NPAS3-211ENST00000551634 MED14O60244 1454 aa29.99■■■□□ 2.39
NPAS3-211ENST00000551634 COL3A1P02461 1466 aaPredicted RBP29.99■■■□□ 2.39
NPAS3-211ENST00000551634 A0A1W2PP64 1363 aa29.99■■■□□ 2.39
NPAS3-211ENST00000551634 ARHGAP31Q2M1Z3 1444 aa29.99■■■□□ 2.39
NPAS3-211ENST00000551634 DDX19BQ9UMR2 479 aa29.99■■■□□ 2.39
NPAS3-211ENST00000551634 SMC4Q9NTJ3 1288 aa29.98■■■□□ 2.39
NPAS3-211ENST00000551634 EXOSC9Q06265 439 aaKnown RBP29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms