RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 C8orf34Q49A92 452 aa16.88■□□□□ 0.29
CACNB3-219ENST00000551544 MTHFSP49914 203 aa16.88■□□□□ 0.29
CACNB3-219ENST00000551544 RUNDC1Q96C34 613 aa16.88■□□□□ 0.29
CACNB3-219ENST00000551544 FRMPD1Q5SYB0 1578 aa16.88■□□□□ 0.29
CACNB3-219ENST00000551544 SLC4A3P48751 1232 aa16.88■□□□□ 0.29
CACNB3-219ENST00000551544 TCP11L2Q8N4U5 519 aa16.88■□□□□ 0.29
CACNB3-219ENST00000551544 PANK1Q8TE04 598 aa16.88■□□□□ 0.29
CACNB3-219ENST00000551544 FRAT1Q92837 279 aaPredicted RBP16.88■□□□□ 0.29
CACNB3-219ENST00000551544 RAPGEF3O95398 923 aa16.87■□□□□ 0.29
CACNB3-219ENST00000551544 USP35Q9P2H5 1018 aa16.87■□□□□ 0.29
CACNB3-219ENST00000551544 COG6Q9Y2V7 657 aa16.87■□□□□ 0.29
CACNB3-219ENST00000551544 RPGRIP1LQ68CZ1 1315 aa16.87■□□□□ 0.29
CACNB3-219ENST00000551544 IGHDP01880 384 aa16.87■□□□□ 0.29
CACNB3-219ENST00000551544 SAFB2Q14151 953 aaKnown RBP eCLIP16.87■□□□□ 0.29
CACNB3-219ENST00000551544 ADGRB1O14514 1584 aa16.87■□□□□ 0.29
CACNB3-219ENST00000551544 QRICH2Q9H0J4 1663 aa16.86■□□□□ 0.29
CACNB3-219ENST00000551544 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
CACNB3-219ENST00000551544 PPLO60437 1756 aa16.86■□□□□ 0.29
CACNB3-219ENST00000551544 MLH3Q9UHC1 1453 aa16.86■□□□□ 0.29
CACNB3-219ENST00000551544 PPM1GO15355 546 aaPredicted RBP16.85■□□□□ 0.29
CACNB3-219ENST00000551544 PDE3AQ14432 1141 aa16.85■□□□□ 0.29
CACNB3-219ENST00000551544 DAXXQ9UER7 740 aaPredicted RBP16.85■□□□□ 0.29
CACNB3-219ENST00000551544 CFAP53Q96M91 514 aa16.84■□□□□ 0.29
CACNB3-219ENST00000551544 EVC2Q86UK5 1308 aa16.84■□□□□ 0.29
CACNB3-219ENST00000551544 VGFO15240 615 aaPredicted RBP16.83■□□□□ 0.29
CACNB3-219ENST00000551544 CABP2Q9NPB3 220 aa16.83■□□□□ 0.29
CACNB3-219ENST00000551544 ABCC3O15438 1527 aa16.83■□□□□ 0.29
CACNB3-219ENST00000551544 HECW2Q9P2P5 1572 aa16.83■□□□□ 0.29
CACNB3-219ENST00000551544 CLUAP1Q96AJ1 413 aa16.83■□□□□ 0.28
CACNB3-219ENST00000551544 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
CACNB3-219ENST00000551544 BCL2L13Q9BXK5 485 aa16.82■□□□□ 0.28
CACNB3-219ENST00000551544 SHPRHQ149N8 1683 aa16.82■□□□□ 0.28
CACNB3-219ENST00000551544 STK26Q9P289 416 aa16.82■□□□□ 0.28
CACNB3-219ENST00000551544 ZC3H13Q5T200 1668 aaKnown RBP16.81■□□□□ 0.28
CACNB3-219ENST00000551544 U2AF1L5P0DN76 240 aaPredicted RBP16.81■□□□□ 0.28
CACNB3-219ENST00000551544 RARSP54136 660 aaKnown RBP16.81■□□□□ 0.28
CACNB3-219ENST00000551544 U2AF1Q01081 240 aaKnown RBP eCLIP16.81■□□□□ 0.28
CACNB3-219ENST00000551544 CFAP74Q9C0B2 1584 aa16.8■□□□□ 0.28
CACNB3-219ENST00000551544 IDI1Q13907 227 aa16.79■□□□□ 0.28
CACNB3-219ENST00000551544 WDR63Q8IWG1 891 aa16.79■□□□□ 0.28
CACNB3-219ENST00000551544 TNNQ9UQP3 1299 aa16.79■□□□□ 0.28
CACNB3-219ENST00000551544 GLI2P10070 1586 aa16.79■□□□□ 0.28
CACNB3-219ENST00000551544 NINLQ9Y2I6 1382 aa16.79■□□□□ 0.28
CACNB3-219ENST00000551544 ANKRD36BQ8N2N9 1353 aa16.78■□□□□ 0.28
CACNB3-219ENST00000551544 SRPK2P78362 688 aaKnown RBP16.78■□□□□ 0.28
CACNB3-219ENST00000551544 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
CACNB3-219ENST00000551544 IQSEC2Q5JU85 1478 aa16.78■□□□□ 0.28
CACNB3-219ENST00000551544 SIGLEC1Q9BZZ2 1709 aa16.77■□□□□ 0.28
CACNB3-219ENST00000551544 TULP4Q9NRJ4 1543 aa16.77■□□□□ 0.27
CACNB3-219ENST00000551544 CAMSAP1Q5T5Y3 1602 aa16.77■□□□□ 0.27
CACNB3-219ENST00000551544 RLBP1P12271 317 aa16.77■□□□□ 0.27
CACNB3-219ENST00000551544 PUS7Q96PZ0 661 aaKnown RBP16.75■□□□□ 0.27
CACNB3-219ENST00000551544 GGNBP2Q9H3C7 697 aa16.75■□□□□ 0.27
CACNB3-219ENST00000551544 NEXMIFQ5QGS0 1516 aa16.75■□□□□ 0.27
CACNB3-219ENST00000551544 U2SURPO15042 1029 aaKnown RBP16.74■□□□□ 0.27
CACNB3-219ENST00000551544 CCDC27Q2M243 656 aa16.74■□□□□ 0.27
CACNB3-219ENST00000551544 MYH16Q9H6N6 1097 aa16.74■□□□□ 0.27
CACNB3-219ENST00000551544 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
CACNB3-219ENST00000551544 PCDHB15Q9Y5E8 787 aa16.74■□□□□ 0.27
CACNB3-219ENST00000551544 ARHGEF28Q8N1W1 1705 aaKnown RBP16.73■□□□□ 0.27
CACNB3-219ENST00000551544 NSD2O96028 1365 aa16.73■□□□□ 0.27
CACNB3-219ENST00000551544 NFKBIBQ15653 356 aa16.73■□□□□ 0.27
CACNB3-219ENST00000551544 MINK1Q8N4C8 1332 aaPredicted RBP16.73■□□□□ 0.27
CACNB3-219ENST00000551544 MAPK8IP3Q9UPT6 1336 aa16.72■□□□□ 0.27
CACNB3-219ENST00000551544 A0A1W2PP64 1363 aa16.72■□□□□ 0.27
CACNB3-219ENST00000551544 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
CACNB3-219ENST00000551544 TSR2Q969E8 191 aaKnown RBP16.71■□□□□ 0.27
CACNB3-219ENST00000551544 PIK3C2BO00750 1634 aa16.71■□□□□ 0.27
CACNB3-219ENST00000551544 SLC52A1Q9NWF4 448 aa16.71■□□□□ 0.27
CACNB3-219ENST00000551544 NEO1Q92859 1461 aa16.71■□□□□ 0.26
CACNB3-219ENST00000551544 SEC24BO95487 1268 aa16.7■□□□□ 0.26
CACNB3-219ENST00000551544 POGKQ9P215 609 aa16.7■□□□□ 0.26
CACNB3-219ENST00000551544 DIP2CQ9Y2E4 1556 aa16.7■□□□□ 0.26
CACNB3-219ENST00000551544 IL27Q8NEV9 243 aa16.7■□□□□ 0.26
CACNB3-219ENST00000551544 PRAM1Q96QH2 718 aa16.7■□□□□ 0.26
CACNB3-219ENST00000551544 YEATS2Q9ULM3 1422 aa16.69■□□□□ 0.26
CACNB3-219ENST00000551544 ABCC11Q96J66 1382 aa16.68■□□□□ 0.26
CACNB3-219ENST00000551544 USP19O94966 1318 aa16.68■□□□□ 0.26
CACNB3-219ENST00000551544 FTSJ3Q8IY81 847 aaKnown RBP16.68■□□□□ 0.26
CACNB3-219ENST00000551544 ARHGAP31Q2M1Z3 1444 aa16.67■□□□□ 0.26
CACNB3-219ENST00000551544 AAMPQ13685 434 aa16.67■□□□□ 0.26
CACNB3-219ENST00000551544 TERF2IPQ9NYB0 399 aa16.67■□□□□ 0.26
CACNB3-219ENST00000551544 PDZRN3Q9UPQ7 1066 aa16.67■□□□□ 0.26
CACNB3-219ENST00000551544 FYB1O15117 783 aa16.67■□□□□ 0.26
CACNB3-219ENST00000551544 ZKSCAN2Q63HK3 967 aa16.67■□□□□ 0.26
CACNB3-219ENST00000551544 TMPOP42166 694 aaKnown RBP16.66■□□□□ 0.26
CACNB3-219ENST00000551544 EXOSC9Q06265 439 aaKnown RBP16.66■□□□□ 0.26
CACNB3-219ENST00000551544 FBXO31Q5XUX0 539 aaPredicted RBP16.66■□□□□ 0.26
CACNB3-219ENST00000551544 RWDD1Q9H446 243 aaPredicted RBP16.66■□□□□ 0.26
CACNB3-219ENST00000551544 PLEKHF1Q96S99 279 aa16.66■□□□□ 0.26
CACNB3-219ENST00000551544 ANO8Q9HCE9 1232 aaPredicted RBP16.66■□□□□ 0.26
CACNB3-219ENST00000551544 SMC4Q9NTJ3 1288 aa16.66■□□□□ 0.26
CACNB3-219ENST00000551544 MVPQ14764 893 aaKnown RBP16.65■□□□□ 0.26
CACNB3-219ENST00000551544 ZFYVE9O95405 1425 aa16.65■□□□□ 0.26
CACNB3-219ENST00000551544 DZIP1LQ8IYY4 767 aaKnown RBP16.65■□□□□ 0.26
CACNB3-219ENST00000551544 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
CACNB3-219ENST00000551544 ATAD2Q6PL18 1390 aa16.64■□□□□ 0.25
CACNB3-219ENST00000551544 STAG3Q9UJ98 1225 aa16.64■□□□□ 0.25
CACNB3-219ENST00000551544 TRIM35Q9UPQ4 493 aa16.64■□□□□ 0.25
CACNB3-219ENST00000551544 PTPRMP28827 1452 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms