RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 FRAT1Q92837 279 aaPredicted RBP27.74■■■□□ 2.03
NPAS3-210ENST00000551492 NPM2Q86SE8 214 aaKnown RBP27.74■■■□□ 2.03
NPAS3-210ENST00000551492 SPATA31D1Q6ZQQ2 1576 aa27.73■■■□□ 2.03
NPAS3-210ENST00000551492 CABP2Q9NPB3 220 aa27.73■■■□□ 2.03
NPAS3-210ENST00000551492 RIMS1Q86UR5 1692 aaKnown RBP27.72■■■□□ 2.03
NPAS3-210ENST00000551492 C3P01024 1663 aa27.72■■■□□ 2.03
NPAS3-210ENST00000551492 POGKQ9P215 609 aa27.72■■■□□ 2.03
NPAS3-210ENST00000551492 IFT172Q9UG01 1749 aa27.7■■■□□ 2.03
NPAS3-210ENST00000551492 SCAF11Q99590 1463 aaKnown RBP27.7■■■□□ 2.03
NPAS3-210ENST00000551492 CENPJQ9HC77 1338 aaPredicted RBP27.7■■■□□ 2.02
NPAS3-210ENST00000551492 METP08581 1390 aa27.69■■■□□ 2.02
NPAS3-210ENST00000551492 MYOM2P54296 1465 aa27.69■■■□□ 2.02
NPAS3-210ENST00000551492 HSPA2P54652 639 aa27.68■■■□□ 2.02
NPAS3-210ENST00000551492 SLC12A5Q9H2X9 1139 aa27.68■■■□□ 2.02
NPAS3-210ENST00000551492 PLEKHH1Q9ULM0 1364 aa27.67■■■□□ 2.02
NPAS3-210ENST00000551492 NCKAP5LQ9HCH0 1330 aa27.66■■■□□ 2.02
NPAS3-210ENST00000551492 HNRNPUQ00839 825 aaKnown RBP eCLIP27.65■■■□□ 2.02
NPAS3-210ENST00000551492 PRKRIP1Q9H875 184 aaPredicted RBP27.64■■■□□ 2.02
NPAS3-210ENST00000551492 TMEM2Q9UHN6 1383 aa27.64■■■□□ 2.02
NPAS3-210ENST00000551492 NRXN1Q9ULB1 1477 aa27.63■■■□□ 2.01
NPAS3-210ENST00000551492 RRP9O43818 475 aaKnown RBP27.63■■■□□ 2.01
NPAS3-210ENST00000551492 FAM9BQ8IZU0 186 aa27.63■■■□□ 2.01
NPAS3-210ENST00000551492 STAC3Q96MF2 364 aa27.63■■■□□ 2.01
NPAS3-210ENST00000551492 SRPK2P78362 688 aaKnown RBP27.62■■■□□ 2.01
NPAS3-210ENST00000551492 RRAGDQ9NQL2 400 aaPredicted RBP27.62■■■□□ 2.01
NPAS3-210ENST00000551492 TNNT2P45379 298 aaPredicted RBP27.6■■■□□ 2.01
NPAS3-210ENST00000551492 EID1Q9Y6B2 187 aa27.59■■■□□ 2.01
NPAS3-210ENST00000551492 ADGRB1O14514 1584 aa27.59■■■□□ 2.01
NPAS3-210ENST00000551492 NAP1L5Q96NT1 182 aaPredicted RBP27.59■■■□□ 2.01
NPAS3-210ENST00000551492 ASXL1Q8IXJ9 1541 aa27.59■■■□□ 2.01
NPAS3-210ENST00000551492 PTPRMP28827 1452 aa27.59■■■□□ 2.01
NPAS3-210ENST00000551492 THEMISQ8N1K5 641 aaPredicted RBP27.58■■■□□ 2.01
NPAS3-210ENST00000551492 ZFYVE9O95405 1425 aa27.57■■■□□ 2
NPAS3-210ENST00000551492 HSP90AA1P07900 732 aaKnown RBP27.56■■■□□ 2
NPAS3-210ENST00000551492 ALKQ9UM73 1620 aa27.55■■■□□ 2
NPAS3-210ENST00000551492 IQGAP1P46940 1657 aa27.55■■■□□ 2
NPAS3-210ENST00000551492 KDM4FA0A1W2PPD8 638 aa27.55■■■□□ 2
NPAS3-210ENST00000551492 RGS3P49796 1198 aa27.55■■■□□ 2
NPAS3-210ENST00000551492 YTHDC2Q9H6S0 1430 aaKnown RBP27.55■■■□□ 2
NPAS3-210ENST00000551492 MRS2Q9HD23 443 aa27.54■■■□□ 2
NPAS3-210ENST00000551492 EIF3AQ14152 1382 aaKnown RBP27.54■■■□□ 2
NPAS3-210ENST00000551492 CCER2I3L3R5 266 aa27.54■■■□□ 2
NPAS3-210ENST00000551492 PER1O15534 1290 aaPredicted RBP27.52■■■□□ 2
NPAS3-210ENST00000551492 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.52■■■□□ 2
NPAS3-210ENST00000551492 CARD14Q9BXL6 1004 aa27.52■■■□□ 2
NPAS3-210ENST00000551492 UBR1Q8IWV7 1749 aa27.52■■■□□ 2
NPAS3-210ENST00000551492 KLHL34Q8N239 644 aa27.52■■■□□ 2
NPAS3-210ENST00000551492 PPM1GO15355 546 aaPredicted RBP27.5■■□□□ 1.99
NPAS3-210ENST00000551492 CDK19Q9BWU1 502 aa27.49■■□□□ 1.99
NPAS3-210ENST00000551492 AMOTL2Q9Y2J4 779 aa27.49■■□□□ 1.99
NPAS3-210ENST00000551492 PRDM4Q9UKN5 801 aa27.48■■□□□ 1.99
NPAS3-210ENST00000551492 HDGFP51858 240 aaKnown RBP27.47■■□□□ 1.99
NPAS3-210ENST00000551492 NEURL4Q96JN8 1562 aa27.47■■□□□ 1.99
NPAS3-210ENST00000551492 FBLN1P23142 703 aa27.45■■□□□ 1.98
NPAS3-210ENST00000551492 KNSTRNQ9Y448 316 aa27.45■■□□□ 1.98
NPAS3-210ENST00000551492 KCNA6P17658 529 aa27.44■■□□□ 1.98
NPAS3-210ENST00000551492 NFKBIBQ15653 356 aa27.44■■□□□ 1.98
NPAS3-210ENST00000551492 ROBO2Q9HCK4 1378 aa27.43■■□□□ 1.98
NPAS3-210ENST00000551492 CABP1Q9NZU7 370 aa27.43■■□□□ 1.98
NPAS3-210ENST00000551492 ADAMTSL3P82987 1691 aa27.43■■□□□ 1.98
NPAS3-210ENST00000551492 ADAMTS13Q76LX8 1427 aa27.43■■□□□ 1.98
NPAS3-210ENST00000551492 ANKLE2Q86XL3 938 aa27.42■■□□□ 1.98
NPAS3-210ENST00000551492 NLRP1Q9C000 1473 aa27.41■■□□□ 1.98
NPAS3-210ENST00000551492 NRXN3Q9Y4C0 1643 aa27.41■■□□□ 1.98
NPAS3-210ENST00000551492 EVC2Q86UK5 1308 aa27.4■■□□□ 1.98
NPAS3-210ENST00000551492 LAMC1P11047 1609 aa27.4■■□□□ 1.98
NPAS3-210ENST00000551492 KIAA1210Q9ULL0 1709 aa27.4■■□□□ 1.98
NPAS3-210ENST00000551492 PTPRUQ92729 1446 aa27.39■■□□□ 1.98
NPAS3-210ENST00000551492 QRICH2Q9H0J4 1663 aa27.39■■□□□ 1.97
NPAS3-210ENST00000551492 MYO3AQ8NEV4 1616 aa27.39■■□□□ 1.97
NPAS3-210ENST00000551492 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.39■■□□□ 1.97
NPAS3-210ENST00000551492 POLR1AO95602 1720 aaPredicted RBP27.38■■□□□ 1.97
NPAS3-210ENST00000551492 ARHGEF28Q8N1W1 1705 aaKnown RBP27.36■■□□□ 1.97
NPAS3-210ENST00000551492 CDCA8Q53HL2 280 aa27.36■■□□□ 1.97
NPAS3-210ENST00000551492 PAXIP1Q6ZW49 1069 aaPredicted RBP27.36■■□□□ 1.97
NPAS3-210ENST00000551492 CEP170BQ9Y4F5 1589 aaPredicted RBP27.35■■□□□ 1.97
NPAS3-210ENST00000551492 SETBP1Q9Y6X0 1596 aa27.35■■□□□ 1.97
NPAS3-210ENST00000551492 TULP4Q9NRJ4 1543 aa27.34■■□□□ 1.97
NPAS3-210ENST00000551492 PMFBP1Q8TBY8 1022 aa27.34■■□□□ 1.97
NPAS3-210ENST00000551492 LRPPRCP42704 1394 aaKnown RBP27.33■■□□□ 1.97
NPAS3-210ENST00000551492 CHMP4BQ9H444 224 aaKnown RBP27.33■■□□□ 1.97
NPAS3-210ENST00000551492 AMER1Q5JTC6 1135 aaPredicted RBP27.33■■□□□ 1.97
NPAS3-210ENST00000551492 GGNBP2Q9H3C7 697 aa27.33■■□□□ 1.97
NPAS3-210ENST00000551492 SETD1BQ9UPS6 1966 aaKnown RBP27.32■■□□□ 1.96
NPAS3-210ENST00000551492 TAF7LQ5H9L4 462 aa27.32■■□□□ 1.96
NPAS3-210ENST00000551492 BBXQ8WY36 941 aaPredicted RBP27.32■■□□□ 1.96
NPAS3-210ENST00000551492 PLEKHG1Q9ULL1 1385 aa27.32■■□□□ 1.96
NPAS3-210ENST00000551492 ZRANB1Q9UGI0 708 aa27.31■■□□□ 1.96
NPAS3-210ENST00000551492 SOX12O15370 315 aa27.29■■□□□ 1.96
NPAS3-210ENST00000551492 C14orf37Q86TY3 774 aa27.29■■□□□ 1.96
NPAS3-210ENST00000551492 NAP1L2Q9ULW6 460 aaPredicted RBP27.29■■□□□ 1.96
NPAS3-210ENST00000551492 KTN1Q86UP2 1357 aaKnown RBP27.29■■□□□ 1.96
NPAS3-210ENST00000551492 ABCC11Q96J66 1382 aa27.27■■□□□ 1.96
NPAS3-210ENST00000551492 WASLO00401 505 aaPredicted RBP27.27■■□□□ 1.96
NPAS3-210ENST00000551492 PNNQ9H307 717 aaKnown RBP27.27■■□□□ 1.96
NPAS3-210ENST00000551492 NSD3Q9BZ95 1437 aa27.27■■□□□ 1.96
NPAS3-210ENST00000551492 PRR36Q9H6K5 1346 aa27.26■■□□□ 1.95
NPAS3-210ENST00000551492 NUDT16Q96DE0 195 aaKnown RBP27.26■■□□□ 1.95
NPAS3-210ENST00000551492 TBX22Q9Y458 520 aa27.26■■□□□ 1.95
NPAS3-210ENST00000551492 SETD1AO15047 1707 aaKnown RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms