RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 DDX10Q13206 875 aaKnown RBP14.38□□□□□ -0.11
NEK3-203ENST00000551355 SAFB2Q14151 953 aaKnown RBP eCLIP14.38□□□□□ -0.11
NEK3-203ENST00000551355 XRN1Q8IZH2 1706 aaKnown RBP14.37□□□□□ -0.11
NEK3-203ENST00000551355 MINK1Q8N4C8 1332 aaPredicted RBP14.37□□□□□ -0.11
NEK3-203ENST00000551355 NKTRP30414 1462 aaKnown RBP14.37□□□□□ -0.11
NEK3-203ENST00000551355 QRICH2Q9H0J4 1663 aa14.36□□□□□ -0.11
NEK3-203ENST00000551355 ATAD2Q6PL18 1390 aa14.36□□□□□ -0.11
NEK3-203ENST00000551355 PLEKHH1Q9ULM0 1364 aa14.36□□□□□ -0.11
NEK3-203ENST00000551355 NINLQ9Y2I6 1382 aa14.36□□□□□ -0.11
NEK3-203ENST00000551355 POLR3GLQ9BT43 218 aa14.36□□□□□ -0.11
NEK3-203ENST00000551355 NWD1Q149M9 1564 aa14.35□□□□□ -0.11
NEK3-203ENST00000551355 NCOA3Q9Y6Q9 1424 aa14.35□□□□□ -0.11
NEK3-203ENST00000551355 WASLO00401 505 aaPredicted RBP14.35□□□□□ -0.11
NEK3-203ENST00000551355 SRPK2P78362 688 aaKnown RBP14.35□□□□□ -0.11
NEK3-203ENST00000551355 CDK19Q9BWU1 502 aa14.34□□□□□ -0.11
NEK3-203ENST00000551355 STRCQ7RTU9 1775 aa14.33□□□□□ -0.12
NEK3-203ENST00000551355 CHD2O14647 1828 aaKnown RBP14.33□□□□□ -0.12
NEK3-203ENST00000551355 ADGRB2O60241 1585 aa14.32□□□□□ -0.12
NEK3-203ENST00000551355 PROSER2Q86WR7 435 aaPredicted RBP14.32□□□□□ -0.12
NEK3-203ENST00000551355 TULP4Q9NRJ4 1543 aa14.31□□□□□ -0.12
NEK3-203ENST00000551355 CABP2Q9NPB3 220 aa14.3□□□□□ -0.12
NEK3-203ENST00000551355 CCDC61Q9Y6R9 512 aa14.29□□□□□ -0.12
NEK3-203ENST00000551355 ADGRL3Q9HAR2 1447 aa14.29□□□□□ -0.12
NEK3-203ENST00000551355 C14orf37Q86TY3 774 aa14.28□□□□□ -0.12
NEK3-203ENST00000551355 TMC1Q8TDI8 760 aa14.28□□□□□ -0.12
NEK3-203ENST00000551355 C19orf44Q9H6X5 657 aa14.28□□□□□ -0.12
NEK3-203ENST00000551355 PANK3Q9H999 370 aa14.28□□□□□ -0.12
NEK3-203ENST00000551355 TERF2IPQ9NYB0 399 aa14.28□□□□□ -0.12
NEK3-203ENST00000551355 ANKARQ7Z5J8 1434 aa14.27□□□□□ -0.12
NEK3-203ENST00000551355 NUDT16Q96DE0 195 aaKnown RBP14.27□□□□□ -0.13
NEK3-203ENST00000551355 ANP32CO43423 234 aa14.26□□□□□ -0.13
NEK3-203ENST00000551355 POTEDQ86YR6 584 aa14.26□□□□□ -0.13
NEK3-203ENST00000551355 DCCP43146 1447 aa14.25□□□□□ -0.13
NEK3-203ENST00000551355 TMEM94Q12767 1356 aa14.25□□□□□ -0.13
NEK3-203ENST00000551355 ANKRD36BQ8N2N9 1353 aa14.25□□□□□ -0.13
NEK3-203ENST00000551355 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.25□□□□□ -0.13
NEK3-203ENST00000551355 HDGFL2Q7Z4V5 671 aaPredicted RBP14.25□□□□□ -0.13
NEK3-203ENST00000551355 SLC12A5Q9H2X9 1139 aa14.25□□□□□ -0.13
NEK3-203ENST00000551355 KNSTRNQ9Y448 316 aa14.25□□□□□ -0.13
NEK3-203ENST00000551355 CDC42BPGQ6DT37 1551 aa14.25□□□□□ -0.13
NEK3-203ENST00000551355 ZNF335Q9H4Z2 1342 aaPredicted RBP14.24□□□□□ -0.13
NEK3-203ENST00000551355 PER1O15534 1290 aaPredicted RBP14.24□□□□□ -0.13
NEK3-203ENST00000551355 ZNF692Q9BU19 519 aaPredicted RBP14.24□□□□□ -0.13
NEK3-203ENST00000551355 CABP1Q9NZU7 370 aa14.24□□□□□ -0.13
NEK3-203ENST00000551355 KTN1Q86UP2 1357 aaKnown RBP14.23□□□□□ -0.13
NEK3-203ENST00000551355 PLEKHG3A1L390 1219 aa14.23□□□□□ -0.13
NEK3-203ENST00000551355 ATF3P18847 181 aa14.23□□□□□ -0.13
NEK3-203ENST00000551355 CADPS2Q86UW7 1296 aa14.23□□□□□ -0.13
NEK3-203ENST00000551355 ATP7BP35670 1465 aa14.23□□□□□ -0.13
NEK3-203ENST00000551355 MSH6P52701 1360 aa14.22□□□□□ -0.13
NEK3-203ENST00000551355 PPIP5K1Q6PFW1 1433 aa14.22□□□□□ -0.13
NEK3-203ENST00000551355 NPC1L1Q9UHC9 1359 aa14.22□□□□□ -0.13
NEK3-203ENST00000551355 LRRC7Q96NW7 1537 aa14.2□□□□□ -0.14
NEK3-203ENST00000551355 PRR36Q9H6K5 1346 aa14.2□□□□□ -0.14
NEK3-203ENST00000551355 RALBP1Q15311 655 aa14.19□□□□□ -0.14
NEK3-203ENST00000551355 RBM33Q96EV2 1170 aaKnown RBP14.19□□□□□ -0.14
NEK3-203ENST00000551355 MYOM1P52179 1685 aa14.19□□□□□ -0.14
NEK3-203ENST00000551355 CGNL1Q0VF96 1302 aa14.18□□□□□ -0.14
NEK3-203ENST00000551355 CPSF1Q10570 1443 aaKnown RBP14.18□□□□□ -0.14
NEK3-203ENST00000551355 CARD14Q9BXL6 1004 aa14.18□□□□□ -0.14
NEK3-203ENST00000551355 A0A1W2PP64 1363 aa14.18□□□□□ -0.14
NEK3-203ENST00000551355 NSD2O96028 1365 aa14.18□□□□□ -0.14
NEK3-203ENST00000551355 NALCNQ8IZF0 1738 aa14.18□□□□□ -0.14
NEK3-203ENST00000551355 AMER1Q5JTC6 1135 aaPredicted RBP14.17□□□□□ -0.14
NEK3-203ENST00000551355 PRKRIP1Q9H875 184 aaPredicted RBP14.17□□□□□ -0.14
NEK3-203ENST00000551355 POLR3AO14802 1390 aaPredicted RBP14.17□□□□□ -0.14
NEK3-203ENST00000551355 BRD4O60885 1362 aaPredicted RBP14.17□□□□□ -0.14
NEK3-203ENST00000551355 STRCP1A6NGW2 1772 aa14.17□□□□□ -0.14
NEK3-203ENST00000551355 NSD3Q9BZ95 1437 aa14.16□□□□□ -0.14
NEK3-203ENST00000551355 FMN2Q9NZ56 1722 aa14.16□□□□□ -0.14
NEK3-203ENST00000551355 NUTM2FA1L443 756 aa14.16□□□□□ -0.14
NEK3-203ENST00000551355 NGDNQ8NEJ9 315 aaKnown RBP14.16□□□□□ -0.14
NEK3-203ENST00000551355 PHF8Q9UPP1 1060 aa14.16□□□□□ -0.14
NEK3-203ENST00000551355 CD163L1Q9NR16 1453 aa14.16□□□□□ -0.14
NEK3-203ENST00000551355 ACEP12821 1306 aa14.15□□□□□ -0.14
NEK3-203ENST00000551355 EDC4Q6P2E9 1401 aaKnown RBP14.15□□□□□ -0.14
NEK3-203ENST00000551355 CCER2I3L3R5 266 aa14.15□□□□□ -0.14
NEK3-203ENST00000551355 ESCO1Q5FWF5 840 aa14.15□□□□□ -0.14
NEK3-203ENST00000551355 MIER1Q8N108 512 aa14.15□□□□□ -0.14
NEK3-203ENST00000551355 C1orf167Q5SNV9 1468 aa14.14□□□□□ -0.15
NEK3-203ENST00000551355 TOPAZ1Q8N9V7 1692 aa14.14□□□□□ -0.15
NEK3-203ENST00000551355 ITSN1Q15811 1721 aa14.13□□□□□ -0.15
NEK3-203ENST00000551355 MST1RQ04912 1400 aa14.13□□□□□ -0.15
NEK3-203ENST00000551355 USP32Q8NFA0 1604 aa14.12□□□□□ -0.15
NEK3-203ENST00000551355 PARD3Q8TEW0 1356 aa14.12□□□□□ -0.15
NEK3-203ENST00000551355 PMFBP1Q8TBY8 1022 aa14.12□□□□□ -0.15
NEK3-203ENST00000551355 TTC21AQ8NDW8 1320 aa14.12□□□□□ -0.15
NEK3-203ENST00000551355 LTBP4Q8N2S1 1624 aa14.12□□□□□ -0.15
NEK3-203ENST00000551355 USP6P35125 1406 aa14.11□□□□□ -0.15
NEK3-203ENST00000551355 CC2D1BQ5T0F9 858 aaKnown RBP14.11□□□□□ -0.15
NEK3-203ENST00000551355 SLAIN2Q9P270 581 aa14.11□□□□□ -0.15
NEK3-203ENST00000551355 MYBBP1AQ9BQG0 1328 aaKnown RBP14.11□□□□□ -0.15
NEK3-203ENST00000551355 PSME1Q06323 249 aa14.1□□□□□ -0.15
NEK3-203ENST00000551355 FYB1O15117 783 aa14.09□□□□□ -0.15
NEK3-203ENST00000551355 MORC1Q86VD1 984 aa14.09□□□□□ -0.15
NEK3-203ENST00000551355 TTC21BQ7Z4L5 1316 aa14.09□□□□□ -0.15
NEK3-203ENST00000551355 SSH2Q76I76 1423 aa14.08□□□□□ -0.15
NEK3-203ENST00000551355 NLRP13Q86W25 1043 aa14.08□□□□□ -0.16
NEK3-203ENST00000551355 ORAI2Q96SN7 254 aa14.08□□□□□ -0.16
NEK3-203ENST00000551355 NPHP3Q7Z494 1330 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms