RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 GBP4Q96PP9 640 aa15.37■□□□□ 0.05
ERBB3-219ENST00000551242 RNF17Q9BXT8 1623 aaKnown RBP15.36■□□□□ 0.05
ERBB3-219ENST00000551242 FTSJ3Q8IY81 847 aaKnown RBP15.36■□□□□ 0.05
ERBB3-219ENST00000551242 NCOA3Q9Y6Q9 1424 aa15.36■□□□□ 0.05
ERBB3-219ENST00000551242 ERCC6L2Q5T890 1561 aa15.36■□□□□ 0.05
ERBB3-219ENST00000551242 NASPP49321 788 aaPredicted RBP15.36■□□□□ 0.05
ERBB3-219ENST00000551242 RIPK4P57078 832 aa15.36■□□□□ 0.05
ERBB3-219ENST00000551242 ZSCAN30Q86W11 494 aa15.35■□□□□ 0.05
ERBB3-219ENST00000551242 ARHGEF5Q12774 1597 aa15.35■□□□□ 0.05
ERBB3-219ENST00000551242 RAB3GAP1Q15042 981 aa15.35■□□□□ 0.05
ERBB3-219ENST00000551242 MYOM1P52179 1685 aa15.34■□□□□ 0.05
ERBB3-219ENST00000551242 CCDC173Q0VFZ6 552 aa15.34■□□□□ 0.05
ERBB3-219ENST00000551242 SMC5Q8IY18 1101 aa15.34■□□□□ 0.05
ERBB3-219ENST00000551242 FAM13BQ9NYF5 915 aa15.34■□□□□ 0.05
ERBB3-219ENST00000551242 OFD1O75665 1012 aa15.34■□□□□ 0.05
ERBB3-219ENST00000551242 CD2BP2O95400 341 aaKnown RBP15.34■□□□□ 0.05
ERBB3-219ENST00000551242 DZIP1LQ8IYY4 767 aaKnown RBP15.34■□□□□ 0.05
ERBB3-219ENST00000551242 SKOR2Q2VWA4 1001 aaPredicted RBP15.33■□□□□ 0.04
ERBB3-219ENST00000551242 RUNDC1Q96C34 613 aa15.33■□□□□ 0.04
ERBB3-219ENST00000551242 ABCA8O94911 1581 aa15.33■□□□□ 0.04
ERBB3-219ENST00000551242 SCAF11Q99590 1463 aaKnown RBP15.33■□□□□ 0.04
ERBB3-219ENST00000551242 ZKSCAN2Q63HK3 967 aa15.33■□□□□ 0.04
ERBB3-219ENST00000551242 ARID3AQ99856 593 aa15.33■□□□□ 0.04
ERBB3-219ENST00000551242 PPP1R9BQ96SB3 815 aa15.32■□□□□ 0.04
ERBB3-219ENST00000551242 IQGAP1P46940 1657 aa15.32■□□□□ 0.04
ERBB3-219ENST00000551242 MSNP26038 577 aaKnown RBP15.32■□□□□ 0.04
ERBB3-219ENST00000551242 SSFA2P28290 1259 aa15.32■□□□□ 0.04
ERBB3-219ENST00000551242 RBM25P49756 843 aaKnown RBP15.32■□□□□ 0.04
ERBB3-219ENST00000551242 SNX21Q969T3 373 aa15.32■□□□□ 0.04
ERBB3-219ENST00000551242 R3HCC1Q9Y3T6 440 aaKnown RBP15.32■□□□□ 0.04
ERBB3-219ENST00000551242 SAMD9LQ8IVG5 1584 aa15.32■□□□□ 0.04
ERBB3-219ENST00000551242 ITPRIPQ8IWB1 547 aa15.31■□□□□ 0.04
ERBB3-219ENST00000551242 CALD1Q05682 793 aaKnown RBP15.31■□□□□ 0.04
ERBB3-219ENST00000551242 UNC13BO14795 1591 aa15.31■□□□□ 0.04
ERBB3-219ENST00000551242 PRDM4Q9UKN5 801 aa15.3■□□□□ 0.04
ERBB3-219ENST00000551242 CIZ1Q9ULV3 898 aaPredicted RBP15.3■□□□□ 0.04
ERBB3-219ENST00000551242 POLR3AO14802 1390 aaPredicted RBP15.3■□□□□ 0.04
ERBB3-219ENST00000551242 WDR63Q8IWG1 891 aa15.3■□□□□ 0.04
ERBB3-219ENST00000551242 ANP32BQ92688 251 aaKnown RBP15.3■□□□□ 0.04
ERBB3-219ENST00000551242 TSR2Q969E8 191 aaKnown RBP15.3■□□□□ 0.04
ERBB3-219ENST00000551242 RBM42Q9BTD8 480 aaKnown RBP15.3■□□□□ 0.04
ERBB3-219ENST00000551242 MADDQ8WXG6 1647 aa15.3■□□□□ 0.04
ERBB3-219ENST00000551242 PHF23Q9BUL5 403 aaPredicted RBP15.3■□□□□ 0.04
ERBB3-219ENST00000551242 LNPKQ9C0E8 428 aa15.3■□□□□ 0.04
ERBB3-219ENST00000551242 DDX49Q9Y6V7 483 aaKnown RBP15.29■□□□□ 0.04
ERBB3-219ENST00000551242 TRIM27P14373 513 aa15.29■□□□□ 0.04
ERBB3-219ENST00000551242 HDAC1Q13547 482 aaPredicted RBP15.29■□□□□ 0.04
ERBB3-219ENST00000551242 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.29■□□□□ 0.04
ERBB3-219ENST00000551242 MORC1Q86VD1 984 aa15.29■□□□□ 0.04
ERBB3-219ENST00000551242 KIF2CQ99661 725 aa15.29■□□□□ 0.04
ERBB3-219ENST00000551242 SMC4Q9NTJ3 1288 aa15.29■□□□□ 0.04
ERBB3-219ENST00000551242 RSPH4AQ5TD94 716 aa15.28■□□□□ 0.04
ERBB3-219ENST00000551242 PODXL2Q9NZ53 605 aa15.28■□□□□ 0.04
ERBB3-219ENST00000551242 SYCP2Q9BX26 1530 aa15.28■□□□□ 0.04
ERBB3-219ENST00000551242 IQGAP3Q86VI3 1631 aa15.27■□□□□ 0.04
ERBB3-219ENST00000551242 XPCQ01831 940 aaPredicted RBP15.27■□□□□ 0.03
ERBB3-219ENST00000551242 ATP10AO60312 1499 aa15.27■□□□□ 0.03
ERBB3-219ENST00000551242 GAS2L2Q8NHY3 880 aa15.26■□□□□ 0.03
ERBB3-219ENST00000551242 NCLP19338 710 aaKnown RBP15.26■□□□□ 0.03
ERBB3-219ENST00000551242 SCAPERQ9BY12 1400 aa15.26■□□□□ 0.03
ERBB3-219ENST00000551242 CFAP70Q5T0N1 1121 aa15.25■□□□□ 0.03
ERBB3-219ENST00000551242 KDM5AP29375 1690 aaKnown RBP15.25■□□□□ 0.03
ERBB3-219ENST00000551242 CDC42BPBQ9Y5S2 1711 aa15.25■□□□□ 0.03
ERBB3-219ENST00000551242 IQSEC2Q5JU85 1478 aa15.25■□□□□ 0.03
ERBB3-219ENST00000551242 GOLGA6L22H0YM25 854 aa15.24■□□□□ 0.03
ERBB3-219ENST00000551242 K7ELQ4 463 aaPredicted RBP15.24■□□□□ 0.03
ERBB3-219ENST00000551242 EXOSC9Q06265 439 aaKnown RBP15.24■□□□□ 0.03
ERBB3-219ENST00000551242 KLHL40Q2TBA0 621 aa15.24■□□□□ 0.03
ERBB3-219ENST00000551242 SSH1Q8WYL5 1049 aa15.24■□□□□ 0.03
ERBB3-219ENST00000551242 ERVK-7P63135 1459 aa15.24■□□□□ 0.03
ERBB3-219ENST00000551242 BAG4O95429 457 aaKnown RBP15.24■□□□□ 0.03
ERBB3-219ENST00000551242 MTHFSP49914 203 aa15.24■□□□□ 0.03
ERBB3-219ENST00000551242 DDX19BQ9UMR2 479 aa15.24■□□□□ 0.03
ERBB3-219ENST00000551242 CEP152O94986 1710 aa15.24■□□□□ 0.03
ERBB3-219ENST00000551242 PTMSP20962 102 aa15.24■□□□□ 0.03
ERBB3-219ENST00000551242 CAVIN1Q6NZI2 390 aaKnown RBP15.24■□□□□ 0.03
ERBB3-219ENST00000551242 TMEM57Q8N5G2 664 aa15.24■□□□□ 0.03
ERBB3-219ENST00000551242 AK9Q5TCS8 1911 aa15.23■□□□□ 0.03
ERBB3-219ENST00000551242 UQCRHLA0A096LP55 91 aa15.23■□□□□ 0.03
ERBB3-219ENST00000551242 PLEKHG5O94827 1062 aa15.23■□□□□ 0.03
ERBB3-219ENST00000551242 UQCRHP07919 91 aa15.23■□□□□ 0.03
ERBB3-219ENST00000551242 SHPRHQ149N8 1683 aa15.23■□□□□ 0.03
ERBB3-219ENST00000551242 NUCB1Q02818 461 aa15.23■□□□□ 0.03
ERBB3-219ENST00000551242 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.23■□□□□ 0.03
ERBB3-219ENST00000551242 NOB1Q9ULX3 412 aaKnown RBP15.23■□□□□ 0.03
ERBB3-219ENST00000551242 MCTP1Q6DN14 999 aa15.22■□□□□ 0.03
ERBB3-219ENST00000551242 U2AF1L5P0DN76 240 aaPredicted RBP15.22■□□□□ 0.03
ERBB3-219ENST00000551242 U2AF1Q01081 240 aaKnown RBP eCLIP15.22■□□□□ 0.034e-6■■□□□ 14.4
ERBB3-219ENST00000551242 ATF7IPQ6VMQ6 1270 aa15.22■□□□□ 0.03
ERBB3-219ENST00000551242 RBSNQ9H1K0 784 aa15.22■□□□□ 0.03
ERBB3-219ENST00000551242 CCDC27Q2M243 656 aa15.21■□□□□ 0.03
ERBB3-219ENST00000551242 NSD3Q9BZ95 1437 aa15.21■□□□□ 0.03
ERBB3-219ENST00000551242 TERF1P54274 439 aa15.21■□□□□ 0.03
ERBB3-219ENST00000551242 CHD1LQ86WJ1 897 aa15.21■□□□□ 0.03
ERBB3-219ENST00000551242 SLC12A5Q9H2X9 1139 aa15.21■□□□□ 0.03
ERBB3-219ENST00000551242 ZBTB40Q9NUA8 1239 aa15.21■□□□□ 0.03
ERBB3-219ENST00000551242 NOL7Q9UMY1 257 aaKnown RBP15.2■□□□□ 0.02
ERBB3-219ENST00000551242 ZSCAN23Q3MJ62 389 aa15.2■□□□□ 0.02
ERBB3-219ENST00000551242 PRDM10Q9NQV6 1147 aa15.2■□□□□ 0.02
ERBB3-219ENST00000551242 MAST1Q9Y2H9 1570 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms