RNA–Protein interactions for RNA: ENST00000550846.5

PFDN5-211, Transcript of prefoldin subunit 5, humanhuman

TSL 2 BASIC

Gene PFDN5, Length 392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-211ENST00000550846 USP21Q9UK80 565 aa12.03□□□□□ -0.48
PFDN5-211ENST00000550846 SOS2Q07890 1332 aaPredicted RBP12.03□□□□□ -0.48
PFDN5-211ENST00000550846 RPGRIP1LQ68CZ1 1315 aa12.03□□□□□ -0.48
PFDN5-211ENST00000550846 PLEKHG5O94827 1062 aa12.02□□□□□ -0.49
PFDN5-211ENST00000550846 WAPLQ7Z5K2 1190 aa12.02□□□□□ -0.49
PFDN5-211ENST00000550846 FOXO3O43524 673 aa12.01□□□□□ -0.49
PFDN5-211ENST00000550846 TMEM132EQ6IEE7 984 aa12.01□□□□□ -0.49
PFDN5-211ENST00000550846 PLEKHH1Q9ULM0 1364 aa12.01□□□□□ -0.49
PFDN5-211ENST00000550846 CCDC144AA2RUR9 1427 aa12.01□□□□□ -0.49
PFDN5-211ENST00000550846 LAMC1P11047 1609 aa12□□□□□ -0.49
PFDN5-211ENST00000550846 TRPC5Q9UL62 973 aaPredicted RBP11.99□□□□□ -0.49
PFDN5-211ENST00000550846 NPHP3Q7Z494 1330 aa11.99□□□□□ -0.49
PFDN5-211ENST00000550846 CDC42BPGQ6DT37 1551 aa11.99□□□□□ -0.49
PFDN5-211ENST00000550846 PXDNQ92626 1479 aa11.98□□□□□ -0.49
PFDN5-211ENST00000550846 PRAG1Q86YV5 1406 aa11.98□□□□□ -0.49
PFDN5-211ENST00000550846 MYOM2P54296 1465 aa11.97□□□□□ -0.49
PFDN5-211ENST00000550846 ATAD2Q6PL18 1390 aa11.97□□□□□ -0.49
PFDN5-211ENST00000550846 ATRNO75882 1429 aa11.96□□□□□ -0.49
PFDN5-211ENST00000550846 SPATA31E1Q6ZUB1 1445 aa11.96□□□□□ -0.49
PFDN5-211ENST00000550846 SAFB2Q14151 953 aaKnown RBP eCLIP11.96□□□□□ -0.49
PFDN5-211ENST00000550846 FNBP4Q8N3X1 1017 aaPredicted RBP11.96□□□□□ -0.49
PFDN5-211ENST00000550846 MPHOSPH9Q99550 1183 aa11.96□□□□□ -0.49
PFDN5-211ENST00000550846 COL22A1Q8NFW1 1626 aaPredicted RBP11.96□□□□□ -0.5
PFDN5-211ENST00000550846 LRPPRCP42704 1394 aaKnown RBP11.95□□□□□ -0.5
PFDN5-211ENST00000550846 BCL9LQ86UU0 1499 aa11.95□□□□□ -0.5
PFDN5-211ENST00000550846 ANKRD30BQ9BXX2 1392 aa11.94□□□□□ -0.5
PFDN5-211ENST00000550846 TECPR2O15040 1411 aa11.94□□□□□ -0.5
PFDN5-211ENST00000550846 PIK3C2GO75747 1445 aa11.94□□□□□ -0.5
PFDN5-211ENST00000550846 YTHDC2Q9H6S0 1430 aaKnown RBP11.94□□□□□ -0.5
PFDN5-211ENST00000550846 HAP1P54257 671 aaPredicted RBP11.93□□□□□ -0.5
PFDN5-211ENST00000550846 LMOD2Q6P5Q4 547 aa11.93□□□□□ -0.5
PFDN5-211ENST00000550846 IFT172Q9UG01 1749 aa11.93□□□□□ -0.5
PFDN5-211ENST00000550846 ABCC11Q96J66 1382 aa11.92□□□□□ -0.5
PFDN5-211ENST00000550846 KRT28Q7Z3Y7 464 aa11.92□□□□□ -0.5
PFDN5-211ENST00000550846 CABLES1Q8TDN4 633 aa11.92□□□□□ -0.5
PFDN5-211ENST00000550846 SRCAPQ6ZRS2 3230 aa11.92□□□□□ -0.5
PFDN5-211ENST00000550846 FMN2Q9NZ56 1722 aa11.91□□□□□ -0.5
PFDN5-211ENST00000550846 CFAP70Q5T0N1 1121 aa11.91□□□□□ -0.5
PFDN5-211ENST00000550846 GJD4Q96KN9 370 aaPredicted RBP11.91□□□□□ -0.5
PFDN5-211ENST00000550846 KNDC1Q76NI1 1749 aa11.91□□□□□ -0.5
PFDN5-211ENST00000550846 SPATA31A3Q5VYP0 1347 aa11.9□□□□□ -0.5
PFDN5-211ENST00000550846 PRAM1Q96QH2 718 aa11.9□□□□□ -0.5
PFDN5-211ENST00000550846 MARF1Q9Y4F3 1742 aaKnown RBP11.9□□□□□ -0.5
PFDN5-211ENST00000550846 EP400Q96L91 3159 aa11.89□□□□□ -0.51
PFDN5-211ENST00000550846 RALGAPBQ86X10 1494 aa11.89□□□□□ -0.51
PFDN5-211ENST00000550846 UNC5CLQ8IV45 518 aa11.89□□□□□ -0.51
PFDN5-211ENST00000550846 PHF8Q9UPP1 1060 aa11.89□□□□□ -0.51
PFDN5-211ENST00000550846 CCDC9Q9Y3X0 531 aaKnown RBP11.89□□□□□ -0.51
PFDN5-211ENST00000550846 GLI3P10071 1580 aa11.88□□□□□ -0.51
PFDN5-211ENST00000550846 KIF1AQ12756 1690 aa11.88□□□□□ -0.51
PFDN5-211ENST00000550846 TNS3Q68CZ2 1445 aa11.88□□□□□ -0.51
PFDN5-211ENST00000550846 PMFBP1Q8TBY8 1022 aa11.88□□□□□ -0.51
PFDN5-211ENST00000550846 HIRIP3Q9BW71 556 aaPredicted RBP11.88□□□□□ -0.51
PFDN5-211ENST00000550846 ZRANB1Q9UGI0 708 aa11.88□□□□□ -0.51
PFDN5-211ENST00000550846 USP32Q8NFA0 1604 aa11.88□□□□□ -0.51
PFDN5-211ENST00000550846 SLIT2O94813 1529 aa11.87□□□□□ -0.51
PFDN5-211ENST00000550846 A0A0G2JS52 829 aa11.87□□□□□ -0.51
PFDN5-211ENST00000550846 MYT1Q01538 1121 aa11.87□□□□□ -0.51
PFDN5-211ENST00000550846 C14orf93Q9H972 538 aaKnown RBP11.87□□□□□ -0.51
PFDN5-211ENST00000550846 POGKQ9P215 609 aa11.87□□□□□ -0.51
PFDN5-211ENST00000550846 DHX57Q6P158 1386 aaKnown RBP11.87□□□□□ -0.51
PFDN5-211ENST00000550846 RGPD8O14715 1765 aaPredicted RBP11.87□□□□□ -0.51
PFDN5-211ENST00000550846 PSME1Q06323 249 aa11.86□□□□□ -0.51
PFDN5-211ENST00000550846 DEFB132Q7Z7B7 95 aa11.85□□□□□ -0.51
PFDN5-211ENST00000550846 SEPT12Q8IYM1 358 aa11.85□□□□□ -0.51
PFDN5-211ENST00000550846 TRAK1Q9UPV9 953 aa11.85□□□□□ -0.51
PFDN5-211ENST00000550846 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.85□□□□□ -0.51
PFDN5-211ENST00000550846 MINK1Q8N4C8 1332 aaPredicted RBP11.85□□□□□ -0.51
PFDN5-211ENST00000550846 NRXN1Q9ULB1 1477 aa11.84□□□□□ -0.51
PFDN5-211ENST00000550846 KDM2AQ9Y2K7 1162 aa11.84□□□□□ -0.51
PFDN5-211ENST00000550846 PLCH1Q4KWH8 1693 aa11.84□□□□□ -0.51
PFDN5-211ENST00000550846 RAB3GAP2Q9H2M9 1393 aa11.83□□□□□ -0.52
PFDN5-211ENST00000550846 ABCA3Q99758 1704 aa11.83□□□□□ -0.52
PFDN5-211ENST00000550846 BRWD3Q6RI45 1802 aa11.82□□□□□ -0.52
PFDN5-211ENST00000550846 FAM83GA6ND36 823 aa11.82□□□□□ -0.52
PFDN5-211ENST00000550846 VPS72Q15906 364 aa11.82□□□□□ -0.52
PFDN5-211ENST00000550846 BLMP54132 1417 aaPredicted RBP11.82□□□□□ -0.52
PFDN5-211ENST00000550846 SBNO1A3KN83 1393 aa11.81□□□□□ -0.52
PFDN5-211ENST00000550846 ARHGEF10O15013 1369 aa11.81□□□□□ -0.52
PFDN5-211ENST00000550846 SF3B2Q13435 895 aaKnown RBP11.81□□□□□ -0.52
PFDN5-211ENST00000550846 CCDC125Q86Z20 511 aa11.81□□□□□ -0.52
PFDN5-211ENST00000550846 DCAF11Q8TEB1 546 aa11.81□□□□□ -0.52
PFDN5-211ENST00000550846 SIRT1Q96EB6 747 aa11.81□□□□□ -0.52
PFDN5-211ENST00000550846 PRR36Q9H6K5 1346 aa11.81□□□□□ -0.52
PFDN5-211ENST00000550846 PAK3O75914 559 aaPredicted RBP11.8□□□□□ -0.52
PFDN5-211ENST00000550846 FAM98CQ17RN3 349 aaKnown RBP11.8□□□□□ -0.52
PFDN5-211ENST00000550846 FAM182BQ5T319 152 aa11.8□□□□□ -0.52
PFDN5-211ENST00000550846 KRT27Q7Z3Y8 459 aa11.8□□□□□ -0.52
PFDN5-211ENST00000550846 BTG4Q9NY30 223 aa11.8□□□□□ -0.52
PFDN5-211ENST00000550846 ADGRB1O14514 1584 aa11.79□□□□□ -0.52
PFDN5-211ENST00000550846 ANKARQ7Z5J8 1434 aa11.79□□□□□ -0.52
PFDN5-211ENST00000550846 DLC1Q96QB1 1528 aa11.79□□□□□ -0.52
PFDN5-211ENST00000550846 GPRASP1Q5JY77 1395 aa11.79□□□□□ -0.52
PFDN5-211ENST00000550846 NGDNQ8NEJ9 315 aaKnown RBP11.78□□□□□ -0.52
PFDN5-211ENST00000550846 ADGRB2O60241 1585 aa11.78□□□□□ -0.52
PFDN5-211ENST00000550846 ACIN1Q9UKV3 1341 aaKnown RBP11.78□□□□□ -0.52
PFDN5-211ENST00000550846 PSDA5PKW4 1024 aaPredicted RBP11.77□□□□□ -0.53
PFDN5-211ENST00000550846 TRPM3Q9HCF6 1732 aaPredicted RBP11.77□□□□□ -0.53
PFDN5-211ENST00000550846 NWD2Q9ULI1 1742 aa11.77□□□□□ -0.53
PFDN5-211ENST00000550846 TULP4Q9NRJ4 1543 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms