RNA–Protein interactions for RNA: ENST00000550790.1

PACS2-210, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 3

Gene PACS2, Length 1,163 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-210ENST00000550790 STK26Q9P289 416 aa31.59■■■□□ 2.65
PACS2-210ENST00000550790 PIK3C2GO75747 1445 aa31.58■■■□□ 2.65
PACS2-210ENST00000550790 IFT172Q9UG01 1749 aa31.58■■■□□ 2.65
PACS2-210ENST00000550790 AFF2P51816 1311 aa31.55■■■□□ 2.64
PACS2-210ENST00000550790 RXRBP28702 533 aa31.54■■■□□ 2.64
PACS2-210ENST00000550790 C14orf93Q9H972 538 aaKnown RBP31.54■■■□□ 2.64
PACS2-210ENST00000550790 RAB3GAP2Q9H2M9 1393 aa31.54■■■□□ 2.64
PACS2-210ENST00000550790 SIRT1Q96EB6 747 aa31.52■■■□□ 2.64
PACS2-210ENST00000550790 CDC42BPGQ6DT37 1551 aa31.51■■■□□ 2.64
PACS2-210ENST00000550790 PLEKHH1Q9ULM0 1364 aa31.51■■■□□ 2.63
PACS2-210ENST00000550790 ESCO1Q5FWF5 840 aa31.5■■■□□ 2.63
PACS2-210ENST00000550790 NRXN1Q9ULB1 1477 aa31.49■■■□□ 2.63
PACS2-210ENST00000550790 C8orf37Q96NL8 207 aa31.49■■■□□ 2.63
PACS2-210ENST00000550790 YTHDC2Q9H6S0 1430 aaKnown RBP31.49■■■□□ 2.63
PACS2-210ENST00000550790 CFAP70Q5T0N1 1121 aa31.46■■■□□ 2.63
PACS2-210ENST00000550790 NPHP3Q7Z494 1330 aa31.46■■■□□ 2.63
PACS2-210ENST00000550790 QTRT2Q9H974 415 aaKnown RBP31.45■■■□□ 2.63
PACS2-210ENST00000550790 FOXO3O43524 673 aa31.44■■■□□ 2.62
PACS2-210ENST00000550790 ADAMTS2O95450 1211 aa31.44■■■□□ 2.62
PACS2-210ENST00000550790 CDK12Q9NYV4 1490 aaPredicted RBP31.44■■■□□ 2.62
PACS2-210ENST00000550790 MYOM2P54296 1465 aa31.43■■■□□ 2.62
PACS2-210ENST00000550790 KNDC1Q76NI1 1749 aa31.43■■■□□ 2.62
PACS2-210ENST00000550790 NGLY1Q96IV0 654 aa31.42■■■□□ 2.62
PACS2-210ENST00000550790 PXDNQ92626 1479 aa31.41■■■□□ 2.62
PACS2-210ENST00000550790 NUTM2FA1L443 756 aa31.41■■■□□ 2.62
PACS2-210ENST00000550790 HRCP23327 699 aa31.41■■■□□ 2.62
PACS2-210ENST00000550790 UPF1Q92900 1129 aaKnown RBP eCLIP31.41■■■□□ 2.62
PACS2-210ENST00000550790 DHX57Q6P158 1386 aaKnown RBP31.39■■■□□ 2.62
PACS2-210ENST00000550790 RBM6P78332 1123 aaKnown RBP31.38■■■□□ 2.61
PACS2-210ENST00000550790 FNBP4Q8N3X1 1017 aaPredicted RBP31.38■■■□□ 2.61
PACS2-210ENST00000550790 COL22A1Q8NFW1 1626 aaPredicted RBP31.36■■■□□ 2.61
PACS2-210ENST00000550790 XPCQ01831 940 aaPredicted RBP31.36■■■□□ 2.61
PACS2-210ENST00000550790 PRAM1Q96QH2 718 aa31.31■■■□□ 2.6
PACS2-210ENST00000550790 USP21Q9UK80 565 aa31.31■■■□□ 2.6
PACS2-210ENST00000550790 FMN2Q9NZ56 1722 aa31.31■■■□□ 2.6
PACS2-210ENST00000550790 RGS12O14924 1447 aa31.28■■■□□ 2.6
PACS2-210ENST00000550790 SPATA31A3Q5VYP0 1347 aa31.27■■■□□ 2.6
PACS2-210ENST00000550790 KRT28Q7Z3Y7 464 aa31.26■■■□□ 2.59
PACS2-210ENST00000550790 STAC3Q96MF2 364 aa31.26■■■□□ 2.59
PACS2-210ENST00000550790 TRPC5Q9UL62 973 aaPredicted RBP31.26■■■□□ 2.59
PACS2-210ENST00000550790 DLC1Q96QB1 1528 aa31.25■■■□□ 2.59
PACS2-210ENST00000550790 SAFB2Q14151 953 aaKnown RBP eCLIP31.25■■■□□ 2.59
PACS2-210ENST00000550790 DCAF11Q8TEB1 546 aa31.25■■■□□ 2.59
PACS2-210ENST00000550790 PHF8Q9UPP1 1060 aa31.25■■■□□ 2.59
PACS2-210ENST00000550790 ADGRB1O14514 1584 aa31.25■■■□□ 2.59
PACS2-210ENST00000550790 KDM2AQ9Y2K7 1162 aa31.24■■■□□ 2.59
PACS2-210ENST00000550790 ATRNO75882 1429 aa31.23■■■□□ 2.59
PACS2-210ENST00000550790 BCL9LQ86UU0 1499 aa31.22■■■□□ 2.59
PACS2-210ENST00000550790 POGKQ9P215 609 aa31.22■■■□□ 2.59
PACS2-210ENST00000550790 KIF1AQ12756 1690 aa31.21■■■□□ 2.59
PACS2-210ENST00000550790 TRAK1Q9UPV9 953 aa31.2■■■□□ 2.59
PACS2-210ENST00000550790 PSME1Q06323 249 aa31.17■■■□□ 2.58
PACS2-210ENST00000550790 RGPD8O14715 1765 aaPredicted RBP31.16■■■□□ 2.58
PACS2-210ENST00000550790 ANKARQ7Z5J8 1434 aa31.15■■■□□ 2.58
PACS2-210ENST00000550790 SBNO1A3KN83 1393 aa31.14■■■□□ 2.58
PACS2-210ENST00000550790 MARF1Q9Y4F3 1742 aaKnown RBP31.12■■■□□ 2.57
PACS2-210ENST00000550790 ADGRB2O60241 1585 aa31.11■■■□□ 2.57
PACS2-210ENST00000550790 TNS3Q68CZ2 1445 aa31.11■■■□□ 2.57
PACS2-210ENST00000550790 HIRIP3Q9BW71 556 aaPredicted RBP31.11■■■□□ 2.57
PACS2-210ENST00000550790 PMFBP1Q8TBY8 1022 aa31.1■■■□□ 2.57
PACS2-210ENST00000550790 GJD4Q96KN9 370 aaPredicted RBP31.1■■■□□ 2.57
PACS2-210ENST00000550790 USP32Q8NFA0 1604 aa31.09■■■□□ 2.57
PACS2-210ENST00000550790 SLIT2O94813 1529 aa31.09■■■□□ 2.57
PACS2-210ENST00000550790 MINK1Q8N4C8 1332 aaPredicted RBP31.09■■■□□ 2.57
PACS2-210ENST00000550790 UNC5CLQ8IV45 518 aa31.09■■■□□ 2.57
PACS2-210ENST00000550790 PRR36Q9H6K5 1346 aa31.08■■■□□ 2.57
PACS2-210ENST00000550790 CABLES1Q8TDN4 633 aa31.08■■■□□ 2.57
PACS2-210ENST00000550790 WASLO00401 505 aaPredicted RBP31.07■■■□□ 2.56
PACS2-210ENST00000550790 ATAD2Q6PL18 1390 aa31.05■■■□□ 2.56
PACS2-210ENST00000550790 ARHGEF10O15013 1369 aa31.04■■■□□ 2.56
PACS2-210ENST00000550790 EP400Q96L91 3159 aa31.03■■■□□ 2.56
PACS2-210ENST00000550790 EIF3AQ14152 1382 aaKnown RBP31.01■■■□□ 2.55
PACS2-210ENST00000550790 LMOD2Q6P5Q4 547 aa31■■■□□ 2.55
PACS2-210ENST00000550790 TULP4Q9NRJ4 1543 aa30.99■■■□□ 2.55
PACS2-210ENST00000550790 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.99■■■□□ 2.55
PACS2-210ENST00000550790 RALGAPBQ86X10 1494 aa30.98■■■□□ 2.55
PACS2-210ENST00000550790 FAM83GA6ND36 823 aa30.97■■■□□ 2.55
PACS2-210ENST00000550790 HAP1P54257 671 aaPredicted RBP30.97■■■□□ 2.55
PACS2-210ENST00000550790 GPRASP1Q5JY77 1395 aa30.95■■■□□ 2.55
PACS2-210ENST00000550790 VPS72Q15906 364 aa30.95■■■□□ 2.55
PACS2-210ENST00000550790 GLI3P10071 1580 aa30.95■■■□□ 2.54
PACS2-210ENST00000550790 PLEKHG5O94827 1062 aa30.94■■■□□ 2.54
PACS2-210ENST00000550790 TRPM3Q9HCF6 1732 aaPredicted RBP30.93■■■□□ 2.54
PACS2-210ENST00000550790 ONECUT3O60422 494 aaPredicted RBP30.93■■■□□ 2.54
PACS2-210ENST00000550790 NUDT16Q96DE0 195 aaKnown RBP30.93■■■□□ 2.54
PACS2-210ENST00000550790 NBPF1Q3BBV0 1214 aa30.92■■■□□ 2.54
PACS2-210ENST00000550790 ARHGEF28Q8N1W1 1705 aaKnown RBP30.91■■■□□ 2.54
PACS2-210ENST00000550790 NGDNQ8NEJ9 315 aaKnown RBP30.91■■■□□ 2.54
PACS2-210ENST00000550790 CCDC125Q86Z20 511 aa30.9■■■□□ 2.54
PACS2-210ENST00000550790 CDK19Q9BWU1 502 aa30.9■■■□□ 2.54
PACS2-210ENST00000550790 ABCA3Q99758 1704 aa30.89■■■□□ 2.54
PACS2-210ENST00000550790 ALS2Q96Q42 1657 aa30.88■■■□□ 2.53
PACS2-210ENST00000550790 SRCAPQ6ZRS2 3230 aa30.88■■■□□ 2.53
PACS2-210ENST00000550790 ATP7BP35670 1465 aa30.88■■■□□ 2.53
PACS2-210ENST00000550790 KIAA1210Q9ULL0 1709 aa30.86■■■□□ 2.53
PACS2-210ENST00000550790 NWD2Q9ULI1 1742 aa30.85■■■□□ 2.53
PACS2-210ENST00000550790 SEPT12Q8IYM1 358 aa30.85■■■□□ 2.53
PACS2-210ENST00000550790 PLCH1Q4KWH8 1693 aa30.83■■■□□ 2.53
PACS2-210ENST00000550790 PAK3O75914 559 aaPredicted RBP30.82■■■□□ 2.52
PACS2-210ENST00000550790 CCDC61Q9Y6R9 512 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms