RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 SWT1Q5T5J6 900 aaKnown RBP9.21□□□□□ -0.94
RAB3IP-213ENST00000550647 HELBQ8NG08 1087 aaPredicted RBP9.2□□□□□ -0.94
RAB3IP-213ENST00000550647 GRIPAP1Q4V328 841 aa9.19□□□□□ -0.94
RAB3IP-213ENST00000550647 VARS2Q5ST30 1063 aaKnown RBP9.19□□□□□ -0.94
RAB3IP-213ENST00000550647 CTDSPL2Q05D32 466 aa9.18□□□□□ -0.94
RAB3IP-213ENST00000550647 FAM98CQ17RN3 349 aaKnown RBP9.18□□□□□ -0.94
RAB3IP-213ENST00000550647 ADAMTS19Q8TE59 1207 aa9.18□□□□□ -0.94
RAB3IP-213ENST00000550647 HMX1Q9NP08 348 aaPredicted RBP9.18□□□□□ -0.94
RAB3IP-213ENST00000550647 SLC4A3P48751 1232 aa9.17□□□□□ -0.94
RAB3IP-213ENST00000550647 LAPTM4BQ86VI4 370 aa9.17□□□□□ -0.94
RAB3IP-213ENST00000550647 SLF2Q8IX21 1173 aa9.17□□□□□ -0.94
RAB3IP-213ENST00000550647 PBXIP1Q96AQ6 731 aa9.17□□□□□ -0.94
RAB3IP-213ENST00000550647 ACIN1Q9UKV3 1341 aaKnown RBP9.16□□□□□ -0.94
RAB3IP-213ENST00000550647 ARHGAP33O14559 1287 aa9.16□□□□□ -0.94
RAB3IP-213ENST00000550647 RANGAP1P46060 587 aaPredicted RBP9.16□□□□□ -0.94
RAB3IP-213ENST00000550647 HDGFP51858 240 aaKnown RBP9.16□□□□□ -0.94
RAB3IP-213ENST00000550647 CFAP99D6REC4 459 aa9.15□□□□□ -0.94
RAB3IP-213ENST00000550647 SOX11P35716 441 aa9.15□□□□□ -0.94
RAB3IP-213ENST00000550647 SRPK2P78362 688 aaKnown RBP9.15□□□□□ -0.94
RAB3IP-213ENST00000550647 GUCA2AQ02747 115 aa9.15□□□□□ -0.94
RAB3IP-213ENST00000550647 HDGFL1Q5TGJ6 251 aa9.15□□□□□ -0.94
RAB3IP-213ENST00000550647 HLA-CQ95604 372 aa9.15□□□□□ -0.94
RAB3IP-213ENST00000550647 ALG2Q9H553 416 aa9.15□□□□□ -0.94
RAB3IP-213ENST00000550647 POTEB3A0JP26 581 aa9.14□□□□□ -0.95
RAB3IP-213ENST00000550647 PBX2P40425 430 aa9.14□□□□□ -0.95
RAB3IP-213ENST00000550647 PSEN2P49810 448 aa9.14□□□□□ -0.95
RAB3IP-213ENST00000550647 POTEBQ6S5H4 581 aa9.14□□□□□ -0.95
RAB3IP-213ENST00000550647 POTEEQ6S8J3 1075 aa9.14□□□□□ -0.95
RAB3IP-213ENST00000550647 ZNF687Q8N1G0 1237 aa9.14□□□□□ -0.95
RAB3IP-213ENST00000550647 USTQ9Y2C2 406 aa9.14□□□□□ -0.95
RAB3IP-213ENST00000550647 ATP6V1AP38606 617 aa9.13□□□□□ -0.95
RAB3IP-213ENST00000550647 FUT2Q10981 343 aa9.13□□□□□ -0.95
RAB3IP-213ENST00000550647 CFAP70Q5T0N1 1121 aa9.13□□□□□ -0.95
RAB3IP-213ENST00000550647 DESI1Q6ICB0 168 aa9.13□□□□□ -0.95
RAB3IP-213ENST00000550647 PATL2C9JE40 543 aaKnown RBP9.12□□□□□ -0.95
RAB3IP-213ENST00000550647 CFHP08603 1231 aa9.12□□□□□ -0.95
RAB3IP-213ENST00000550647 LRRN4Q8WUT4 740 aa9.12□□□□□ -0.95
RAB3IP-213ENST00000550647 SEPT9Q9UHD8 586 aaPredicted RBP9.12□□□□□ -0.95
RAB3IP-213ENST00000550647 NPM2Q86SE8 214 aaKnown RBP9.11□□□□□ -0.95
RAB3IP-213ENST00000550647 PPP1R12CQ9BZL4 782 aa9.11□□□□□ -0.95
RAB3IP-213ENST00000550647 VPS9D1Q9Y2B5 631 aa9.11□□□□□ -0.95
RAB3IP-213ENST00000550647 C6orf229H3BNL8 230 aa9.1□□□□□ -0.95
RAB3IP-213ENST00000550647 BHMG1C9JSJ3 638 aaPredicted RBP9.09□□□□□ -0.95
RAB3IP-213ENST00000550647 DMRTA1Q5VZB9 504 aa9.09□□□□□ -0.95
RAB3IP-213ENST00000550647 SAMD7Q7Z3H4 446 aa9.09□□□□□ -0.95
RAB3IP-213ENST00000550647 RETREG3Q86VR2 466 aa9.09□□□□□ -0.95
RAB3IP-213ENST00000550647 PRR7Q8TB68 274 aa9.09□□□□□ -0.95
RAB3IP-213ENST00000550647 VAC14Q08AM6 782 aa9.08□□□□□ -0.96
RAB3IP-213ENST00000550647 KMT5BQ4FZB7 885 aa9.08□□□□□ -0.96
RAB3IP-213ENST00000550647 KRTAP3-3Q9BYR6 98 aa9.08□□□□□ -0.96
RAB3IP-213ENST00000550647 KRTAP3-2Q9BYR7 98 aa9.08□□□□□ -0.96
RAB3IP-213ENST00000550647 NBPF3Q9H094 633 aa9.08□□□□□ -0.96
RAB3IP-213ENST00000550647 Q3C1V9 767 aa9.07□□□□□ -0.96
RAB3IP-213ENST00000550647 MORN1Q5T089 497 aa9.07□□□□□ -0.96
RAB3IP-213ENST00000550647 AEBP1Q8IUX7 1158 aa9.07□□□□□ -0.96
RAB3IP-213ENST00000550647 EPS8L1Q8TE68 723 aa9.07□□□□□ -0.96
RAB3IP-213ENST00000550647 UCN2Q96RP3 112 aa9.07□□□□□ -0.96
RAB3IP-213ENST00000550647 PALM3A6NDB9 673 aaPredicted RBP9.06□□□□□ -0.96
RAB3IP-213ENST00000550647 TK2O00142 265 aa9.06□□□□□ -0.96
RAB3IP-213ENST00000550647 ACTN4O43707 911 aaKnown RBP9.06□□□□□ -0.96
RAB3IP-213ENST00000550647 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.05□□□□□ -0.96
RAB3IP-213ENST00000550647 BRD1O95696 1058 aa9.05□□□□□ -0.96
RAB3IP-213ENST00000550647 KCNA1Q09470 495 aa9.05□□□□□ -0.96
RAB3IP-213ENST00000550647 PNMA1Q8ND90 353 aa9.05□□□□□ -0.96
RAB3IP-213ENST00000550647 TSC1Q92574 1164 aa9.05□□□□□ -0.96
RAB3IP-213ENST00000550647 PRR14Q9BWN1 585 aa9.05□□□□□ -0.96
RAB3IP-213ENST00000550647 SALL2Q9Y467 1007 aaPredicted RBP9.05□□□□□ -0.96
RAB3IP-213ENST00000550647 PER1O15534 1290 aaPredicted RBP9.04□□□□□ -0.96
RAB3IP-213ENST00000550647 ATG7O95352 703 aa9.04□□□□□ -0.96
RAB3IP-213ENST00000550647 NR6A1Q15406 480 aa9.04□□□□□ -0.96
RAB3IP-213ENST00000550647 LYPD8Q6UX82 237 aa9.04□□□□□ -0.96
RAB3IP-213ENST00000550647 ZFRQ96KR1 1074 aaKnown RBP9.04□□□□□ -0.96
RAB3IP-213ENST00000550647 CSB-PGBD3P0DP91 1061 aa9.03□□□□□ -0.96
RAB3IP-213ENST00000550647 SYMPKQ92797 1274 aaKnown RBP9.03□□□□□ -0.96
RAB3IP-213ENST00000550647 SLC27A5Q9Y2P5 690 aa9.02□□□□□ -0.97
RAB3IP-213ENST00000550647 ZC3H4Q9UPT8 1303 aaKnown RBP9.02□□□□□ -0.97
RAB3IP-213ENST00000550647 EIF4G2P78344 907 aaKnown RBP eCLIP9.01□□□□□ -0.97
RAB3IP-213ENST00000550647 NR1H3Q13133 447 aa9.01□□□□□ -0.97
RAB3IP-213ENST00000550647 TMCO4Q5TGY1 634 aa9.01□□□□□ -0.97
RAB3IP-213ENST00000550647 SPNS2Q8IVW8 549 aa9.01□□□□□ -0.97
RAB3IP-213ENST00000550647 AXIN2Q9Y2T1 843 aa9.01□□□□□ -0.97
RAB3IP-213ENST00000550647 MAFBQ9Y5Q3 323 aaPredicted RBP9.01□□□□□ -0.97
RAB3IP-213ENST00000550647 LSM11P83369 360 aaKnown RBP eCLIP9□□□□□ -0.97
RAB3IP-213ENST00000550647 SEMA3FQ13275 785 aa9□□□□□ -0.97
RAB3IP-213ENST00000550647 NFATC2IPQ8NCF5 419 aa9□□□□□ -0.97
RAB3IP-213ENST00000550647 TFIP11Q9UBB9 837 aaKnown RBP9□□□□□ -0.97
RAB3IP-213ENST00000550647 RFX1P22670 979 aa8.99□□□□□ -0.97
RAB3IP-213ENST00000550647 LMOD1P29536 600 aaPredicted RBP8.99□□□□□ -0.97
RAB3IP-213ENST00000550647 RGS22Q8NE09 1264 aa8.99□□□□□ -0.97
RAB3IP-213ENST00000550647 ATP9BO43861 1147 aa8.98□□□□□ -0.97
RAB3IP-213ENST00000550647 F12P00748 615 aaPredicted RBP8.98□□□□□ -0.97
RAB3IP-213ENST00000550647 BRICD5Q6PL45 260 aa8.98□□□□□ -0.97
RAB3IP-213ENST00000550647 LRCH3Q96II8 777 aa8.98□□□□□ -0.97
RAB3IP-213ENST00000550647 GZF1Q9H116 711 aaPredicted RBP8.98□□□□□ -0.97
RAB3IP-213ENST00000550647 TMEM88BA6NKF7 163 aa8.97□□□□□ -0.97
RAB3IP-213ENST00000550647 ELOAQ14241 798 aaKnown RBP8.97□□□□□ -0.97
RAB3IP-213ENST00000550647 MRPL50Q8N5N7 158 aaKnown RBP8.97□□□□□ -0.97
RAB3IP-213ENST00000550647 USB1Q9BQ65 265 aaKnown RBP8.97□□□□□ -0.97
RAB3IP-213ENST00000550647 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.97□□□□□ -0.97
RAB3IP-213ENST00000550647 ZBBXA8MT70 800 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms