RNA–Protein interactions for RNA: ENST00000550446.5

LETMD1-224, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 562 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-224ENST00000550446 ANKRD30BQ9BXX2 1392 aa28.16■■■□□ 2.1
LETMD1-224ENST00000550446 UPF1Q92900 1129 aaKnown RBP eCLIP28.16■■■□□ 2.1
LETMD1-224ENST00000550446 SPATA31E1Q6ZUB1 1445 aa28.16■■■□□ 2.1
LETMD1-224ENST00000550446 PRAG1Q86YV5 1406 aa28.16■■■□□ 2.1
LETMD1-224ENST00000550446 NUTM2FA1L443 756 aa28.14■■■□□ 2.1
LETMD1-224ENST00000550446 LRPPRCP42704 1394 aaKnown RBP28.11■■■□□ 2.09
LETMD1-224ENST00000550446 FOXO3O43524 673 aa28.1■■■□□ 2.09
LETMD1-224ENST00000550446 RBM6P78332 1123 aaKnown RBP28.1■■■□□ 2.09
LETMD1-224ENST00000550446 XPCQ01831 940 aaPredicted RBP28.09■■■□□ 2.09
LETMD1-224ENST00000550446 NPHP3Q7Z494 1330 aa28.08■■■□□ 2.09
LETMD1-224ENST00000550446 ACIN1Q9UKV3 1341 aaKnown RBP28.08■■■□□ 2.09
LETMD1-224ENST00000550446 ABCC11Q96J66 1382 aa28.08■■■□□ 2.09
LETMD1-224ENST00000550446 USP21Q9UK80 565 aa28.06■■■□□ 2.08
LETMD1-224ENST00000550446 PLEKHH1Q9ULM0 1364 aa28.06■■■□□ 2.08
LETMD1-224ENST00000550446 CDK12Q9NYV4 1490 aaPredicted RBP28.04■■■□□ 2.08
LETMD1-224ENST00000550446 TECPR2O15040 1411 aa28.03■■■□□ 2.08
LETMD1-224ENST00000550446 C14orf93Q9H972 538 aaKnown RBP28.03■■■□□ 2.08
LETMD1-224ENST00000550446 PIK3C2GO75747 1445 aa28.02■■■□□ 2.08
LETMD1-224ENST00000550446 CFAP70Q5T0N1 1121 aa28.02■■■□□ 2.08
LETMD1-224ENST00000550446 LAMC1P11047 1609 aa28.02■■■□□ 2.08
LETMD1-224ENST00000550446 YTHDC2Q9H6S0 1430 aaKnown RBP28.01■■■□□ 2.07
LETMD1-224ENST00000550446 CDC42BPGQ6DT37 1551 aa27.99■■■□□ 2.07
LETMD1-224ENST00000550446 FNBP4Q8N3X1 1017 aaPredicted RBP27.99■■■□□ 2.07
LETMD1-224ENST00000550446 TRPC5Q9UL62 973 aaPredicted RBP27.99■■■□□ 2.07
LETMD1-224ENST00000550446 SIRT1Q96EB6 747 aa27.98■■■□□ 2.07
LETMD1-224ENST00000550446 RGS12O14924 1447 aa27.97■■■□□ 2.07
LETMD1-224ENST00000550446 DHX57Q6P158 1386 aaKnown RBP27.96■■■□□ 2.07
LETMD1-224ENST00000550446 RAB3GAP2Q9H2M9 1393 aa27.96■■■□□ 2.07
LETMD1-224ENST00000550446 SAFB2Q14151 953 aaKnown RBP eCLIP27.95■■■□□ 2.06
LETMD1-224ENST00000550446 PXDNQ92626 1479 aa27.95■■■□□ 2.06
LETMD1-224ENST00000550446 IFT172Q9UG01 1749 aa27.94■■■□□ 2.06
LETMD1-224ENST00000550446 KRT28Q7Z3Y7 464 aa27.93■■■□□ 2.06
LETMD1-224ENST00000550446 PRAM1Q96QH2 718 aa27.92■■■□□ 2.06
LETMD1-224ENST00000550446 MYOM2P54296 1465 aa27.9■■■□□ 2.06
LETMD1-224ENST00000550446 POGKQ9P215 609 aa27.9■■■□□ 2.06
LETMD1-224ENST00000550446 PHF8Q9UPP1 1060 aa27.89■■■□□ 2.06
LETMD1-224ENST00000550446 KDM2AQ9Y2K7 1162 aa27.89■■■□□ 2.06
LETMD1-224ENST00000550446 SPATA31A3Q5VYP0 1347 aa27.89■■■□□ 2.05
LETMD1-224ENST00000550446 PLEKHG5O94827 1062 aa27.87■■■□□ 2.05
LETMD1-224ENST00000550446 COL22A1Q8NFW1 1626 aaPredicted RBP27.87■■■□□ 2.05
LETMD1-224ENST00000550446 NRXN1Q9ULB1 1477 aa27.87■■■□□ 2.05
LETMD1-224ENST00000550446 PSME1Q06323 249 aa27.86■■■□□ 2.05
LETMD1-224ENST00000550446 ATRNO75882 1429 aa27.85■■■□□ 2.05
LETMD1-224ENST00000550446 KNDC1Q76NI1 1749 aa27.85■■■□□ 2.05
LETMD1-224ENST00000550446 DCAF11Q8TEB1 546 aa27.84■■■□□ 2.05
LETMD1-224ENST00000550446 TRAK1Q9UPV9 953 aa27.84■■■□□ 2.05
LETMD1-224ENST00000550446 BCL9LQ86UU0 1499 aa27.83■■■□□ 2.05
LETMD1-224ENST00000550446 HAP1P54257 671 aaPredicted RBP27.83■■■□□ 2.05
LETMD1-224ENST00000550446 LMOD2Q6P5Q4 547 aa27.83■■■□□ 2.05
LETMD1-224ENST00000550446 GJD4Q96KN9 370 aaPredicted RBP27.82■■■□□ 2.04
LETMD1-224ENST00000550446 PMFBP1Q8TBY8 1022 aa27.81■■■□□ 2.04
LETMD1-224ENST00000550446 ATAD2Q6PL18 1390 aa27.81■■■□□ 2.04
LETMD1-224ENST00000550446 FMN2Q9NZ56 1722 aa27.81■■■□□ 2.04
LETMD1-224ENST00000550446 CABLES1Q8TDN4 633 aa27.8■■■□□ 2.04
LETMD1-224ENST00000550446 UNC5CLQ8IV45 518 aa27.79■■■□□ 2.04
LETMD1-224ENST00000550446 HIRIP3Q9BW71 556 aaPredicted RBP27.79■■■□□ 2.04
LETMD1-224ENST00000550446 MINK1Q8N4C8 1332 aaPredicted RBP27.75■■■□□ 2.03
LETMD1-224ENST00000550446 HRCP23327 699 aa27.75■■■□□ 2.03
LETMD1-224ENST00000550446 KIF1AQ12756 1690 aa27.74■■■□□ 2.03
LETMD1-224ENST00000550446 TNS3Q68CZ2 1445 aa27.73■■■□□ 2.03
LETMD1-224ENST00000550446 SBNO1A3KN83 1393 aa27.72■■■□□ 2.03
LETMD1-224ENST00000550446 STAC3Q96MF2 364 aa27.71■■■□□ 2.03
LETMD1-224ENST00000550446 DLC1Q96QB1 1528 aa27.71■■■□□ 2.03
LETMD1-224ENST00000550446 RGPD8O14715 1765 aaPredicted RBP27.7■■■□□ 2.02
LETMD1-224ENST00000550446 ADGRB1O14514 1584 aa27.69■■■□□ 2.02
LETMD1-224ENST00000550446 SLIT2O94813 1529 aa27.68■■■□□ 2.02
LETMD1-224ENST00000550446 WASLO00401 505 aaPredicted RBP27.68■■■□□ 2.02
LETMD1-224ENST00000550446 ARHGEF10O15013 1369 aa27.68■■■□□ 2.02
LETMD1-224ENST00000550446 ANKARQ7Z5J8 1434 aa27.67■■■□□ 2.02
LETMD1-224ENST00000550446 CCDC9Q9Y3X0 531 aaKnown RBP27.67■■■□□ 2.02
LETMD1-224ENST00000550446 MARF1Q9Y4F3 1742 aaKnown RBP27.67■■■□□ 2.02
LETMD1-224ENST00000550446 FAM83GA6ND36 823 aa27.66■■■□□ 2.02
LETMD1-224ENST00000550446 EP400Q96L91 3159 aa27.66■■■□□ 2.02
LETMD1-224ENST00000550446 PRR36Q9H6K5 1346 aa27.66■■■□□ 2.02
LETMD1-224ENST00000550446 RALGAPBQ86X10 1494 aa27.65■■■□□ 2.02
LETMD1-224ENST00000550446 CCDC125Q86Z20 511 aa27.65■■■□□ 2.02
LETMD1-224ENST00000550446 GPRASP1Q5JY77 1395 aa27.64■■■□□ 2.02
LETMD1-224ENST00000550446 VPS72Q15906 364 aa27.64■■■□□ 2.02
LETMD1-224ENST00000550446 NGDNQ8NEJ9 315 aaKnown RBP27.63■■■□□ 2.01
LETMD1-224ENST00000550446 SEPT12Q8IYM1 358 aa27.62■■■□□ 2.01
LETMD1-224ENST00000550446 EIF3AQ14152 1382 aaKnown RBP27.61■■■□□ 2.01
LETMD1-224ENST00000550446 USP32Q8NFA0 1604 aa27.61■■■□□ 2.01
LETMD1-224ENST00000550446 PAK3O75914 559 aaPredicted RBP27.61■■■□□ 2.01
LETMD1-224ENST00000550446 SRCAPQ6ZRS2 3230 aa27.61■■■□□ 2.01
LETMD1-224ENST00000550446 ZRANB1Q9UGI0 708 aa27.59■■■□□ 2.01
LETMD1-224ENST00000550446 ADGRB2O60241 1585 aa27.57■■■□□ 2
LETMD1-224ENST00000550446 GLI3P10071 1580 aa27.57■■■□□ 2
LETMD1-224ENST00000550446 NUDT16Q96DE0 195 aaKnown RBP27.57■■■□□ 2
LETMD1-224ENST00000550446 BTG4Q9NY30 223 aa27.56■■■□□ 2
LETMD1-224ENST00000550446 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.55■■■□□ 2
LETMD1-224ENST00000550446 ONECUT3O60422 494 aaPredicted RBP27.55■■■□□ 2
LETMD1-224ENST00000550446 A0A0G2JS52 829 aa27.54■■■□□ 2
LETMD1-224ENST00000550446 MYT1Q01538 1121 aa27.54■■■□□ 2
LETMD1-224ENST00000550446 CDK19Q9BWU1 502 aa27.54■■■□□ 2
LETMD1-224ENST00000550446 TULP4Q9NRJ4 1543 aa27.54■■■□□ 2
LETMD1-224ENST00000550446 KRT27Q7Z3Y8 459 aa27.52■■■□□ 2
LETMD1-224ENST00000550446 SF3B2Q13435 895 aaKnown RBP27.49■■□□□ 1.99
LETMD1-224ENST00000550446 FAM98CQ17RN3 349 aaKnown RBP27.49■■□□□ 1.99
LETMD1-224ENST00000550446 NBPF1Q3BBV0 1214 aa27.49■■□□□ 1.99
LETMD1-224ENST00000550446 DEFB132Q7Z7B7 95 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms