RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 NUTM2FA1L443 756 aa25.75■■□□□ 1.71
HCFC2-205ENST00000550444 XPCQ01831 940 aaPredicted RBP25.75■■□□□ 1.71
HCFC2-205ENST00000550444 FNBP4Q8N3X1 1017 aaPredicted RBP25.75■■□□□ 1.71
HCFC2-205ENST00000550444 NPHP3Q7Z494 1330 aa25.74■■□□□ 1.71
HCFC2-205ENST00000550444 ADGRF5Q8IZF2 1346 aa25.74■■□□□ 1.71
HCFC2-205ENST00000550444 FOXO3O43524 673 aa25.74■■□□□ 1.71
HCFC2-205ENST00000550444 WAPLQ7Z5K2 1190 aa25.73■■□□□ 1.71
HCFC2-205ENST00000550444 PRAG1Q86YV5 1406 aa25.72■■□□□ 1.71
HCFC2-205ENST00000550444 LAMC1P11047 1609 aa25.72■■□□□ 1.71
HCFC2-205ENST00000550444 ATAD2Q6PL18 1390 aa25.71■■□□□ 1.71
HCFC2-205ENST00000550444 TMEM132EQ6IEE7 984 aa25.68■■□□□ 1.7
HCFC2-205ENST00000550444 PPLO60437 1756 aa25.67■■□□□ 1.7
HCFC2-205ENST00000550444 CCDC144AA2RUR9 1427 aa25.66■■□□□ 1.7
HCFC2-205ENST00000550444 ATRNO75882 1429 aa25.66■■□□□ 1.7
HCFC2-205ENST00000550444 LRPPRCP42704 1394 aaKnown RBP25.65■■□□□ 1.7
HCFC2-205ENST00000550444 MYOM2P54296 1465 aa25.64■■□□□ 1.69
HCFC2-205ENST00000550444 MPHOSPH9Q99550 1183 aa25.63■■□□□ 1.69
HCFC2-205ENST00000550444 PXDNQ92626 1479 aa25.63■■□□□ 1.69
HCFC2-205ENST00000550444 CDC42BPGQ6DT37 1551 aa25.63■■□□□ 1.69
HCFC2-205ENST00000550444 PLEKHH1Q9ULM0 1364 aa25.62■■□□□ 1.69
HCFC2-205ENST00000550444 COL22A1Q8NFW1 1626 aaPredicted RBP25.62■■□□□ 1.69
HCFC2-205ENST00000550444 GJD4Q96KN9 370 aaPredicted RBP25.61■■□□□ 1.69
HCFC2-205ENST00000550444 BCL9LQ86UU0 1499 aa25.6■■□□□ 1.69
HCFC2-205ENST00000550444 ANKRD30BQ9BXX2 1392 aa25.6■■□□□ 1.69
HCFC2-205ENST00000550444 ABCC11Q96J66 1382 aa25.59■■□□□ 1.69
HCFC2-205ENST00000550444 ZRANB1Q9UGI0 708 aa25.58■■□□□ 1.69
HCFC2-205ENST00000550444 SPATA31E1Q6ZUB1 1445 aa25.57■■□□□ 1.68
HCFC2-205ENST00000550444 PLEKHG5O94827 1062 aa25.57■■□□□ 1.68
HCFC2-205ENST00000550444 KRT28Q7Z3Y7 464 aa25.57■■□□□ 1.68
HCFC2-205ENST00000550444 TECPR2O15040 1411 aa25.56■■□□□ 1.68
HCFC2-205ENST00000550444 UNC5CLQ8IV45 518 aa25.55■■□□□ 1.68
HCFC2-205ENST00000550444 SPATA31A3Q5VYP0 1347 aa25.55■■□□□ 1.68
HCFC2-205ENST00000550444 HAP1P54257 671 aaPredicted RBP25.54■■□□□ 1.68
HCFC2-205ENST00000550444 CCDC125Q86Z20 511 aa25.54■■□□□ 1.68
HCFC2-205ENST00000550444 YTHDC2Q9H6S0 1430 aaKnown RBP25.53■■□□□ 1.68
HCFC2-205ENST00000550444 PIK3C2GO75747 1445 aa25.51■■□□□ 1.67
HCFC2-205ENST00000550444 SAFB2Q14151 953 aaKnown RBP eCLIP25.5■■□□□ 1.67
HCFC2-205ENST00000550444 PHF8Q9UPP1 1060 aa25.5■■□□□ 1.67
HCFC2-205ENST00000550444 PSME1Q06323 249 aa25.49■■□□□ 1.67
HCFC2-205ENST00000550444 CFAP70Q5T0N1 1121 aa25.49■■□□□ 1.67
HCFC2-205ENST00000550444 LMOD2Q6P5Q4 547 aa25.49■■□□□ 1.67
HCFC2-205ENST00000550444 CABLES1Q8TDN4 633 aa25.49■■□□□ 1.67
HCFC2-205ENST00000550444 SIRT1Q96EB6 747 aa25.49■■□□□ 1.67
HCFC2-205ENST00000550444 C14orf93Q9H972 538 aaKnown RBP25.49■■□□□ 1.67
HCFC2-205ENST00000550444 RALGAPBQ86X10 1494 aa25.47■■□□□ 1.67
HCFC2-205ENST00000550444 DHX57Q6P158 1386 aaKnown RBP25.46■■□□□ 1.67
HCFC2-205ENST00000550444 CCDC9Q9Y3X0 531 aaKnown RBP25.46■■□□□ 1.67
HCFC2-205ENST00000550444 MARF1Q9Y4F3 1742 aaKnown RBP25.46■■□□□ 1.67
HCFC2-205ENST00000550444 PRAM1Q96QH2 718 aa25.45■■□□□ 1.66
HCFC2-205ENST00000550444 SLIT2O94813 1529 aa25.45■■□□□ 1.66
HCFC2-205ENST00000550444 FMN2Q9NZ56 1722 aa25.45■■□□□ 1.66
HCFC2-205ENST00000550444 KNDC1Q76NI1 1749 aa25.44■■□□□ 1.66
HCFC2-205ENST00000550444 IFT172Q9UG01 1749 aa25.44■■□□□ 1.66
HCFC2-205ENST00000550444 SEPT12Q8IYM1 358 aa25.43■■□□□ 1.66
HCFC2-205ENST00000550444 POGKQ9P215 609 aa25.42■■□□□ 1.66
HCFC2-205ENST00000550444 KIF1AQ12756 1690 aa25.42■■□□□ 1.66
HCFC2-205ENST00000550444 TNS3Q68CZ2 1445 aa25.41■■□□□ 1.66
HCFC2-205ENST00000550444 PMFBP1Q8TBY8 1022 aa25.41■■□□□ 1.66
HCFC2-205ENST00000550444 GLI3P10071 1580 aa25.4■■□□□ 1.66
HCFC2-205ENST00000550444 VPS72Q15906 364 aa25.4■■□□□ 1.66
HCFC2-205ENST00000550444 SF3B2Q13435 895 aaKnown RBP25.39■■□□□ 1.66
HCFC2-205ENST00000550444 DEFB132Q7Z7B7 95 aa25.39■■□□□ 1.66
HCFC2-205ENST00000550444 BLMP54132 1417 aaPredicted RBP25.38■■□□□ 1.65
HCFC2-205ENST00000550444 USP32Q8NFA0 1604 aa25.38■■□□□ 1.65
HCFC2-205ENST00000550444 SRCAPQ6ZRS2 3230 aa25.37■■□□□ 1.65
HCFC2-205ENST00000550444 SBNO1A3KN83 1393 aa25.37■■□□□ 1.65
HCFC2-205ENST00000550444 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.37■■□□□ 1.65
HCFC2-205ENST00000550444 ARHGEF10O15013 1369 aa25.35■■□□□ 1.65
HCFC2-205ENST00000550444 EP400Q96L91 3159 aa25.35■■□□□ 1.65
HCFC2-205ENST00000550444 A0A0G2JS52 829 aa25.35■■□□□ 1.65
HCFC2-205ENST00000550444 FAM83GA6ND36 823 aa25.35■■□□□ 1.65
HCFC2-205ENST00000550444 MYT1Q01538 1121 aa25.35■■□□□ 1.65
HCFC2-205ENST00000550444 NRXN1Q9ULB1 1477 aa25.34■■□□□ 1.65
HCFC2-205ENST00000550444 HIRIP3Q9BW71 556 aaPredicted RBP25.34■■□□□ 1.65
HCFC2-205ENST00000550444 ACIN1Q9UKV3 1341 aaKnown RBP25.34■■□□□ 1.65
HCFC2-205ENST00000550444 RGPD8O14715 1765 aaPredicted RBP25.33■■□□□ 1.65
HCFC2-205ENST00000550444 KRT27Q7Z3Y8 459 aa25.33■■□□□ 1.65
HCFC2-205ENST00000550444 TRAK1Q9UPV9 953 aa25.33■■□□□ 1.65
HCFC2-205ENST00000550444 ONECUT3O60422 494 aaPredicted RBP25.31■■□□□ 1.64
HCFC2-205ENST00000550444 KDM2AQ9Y2K7 1162 aa25.31■■□□□ 1.64
HCFC2-205ENST00000550444 MINK1Q8N4C8 1332 aaPredicted RBP25.3■■□□□ 1.64
HCFC2-205ENST00000550444 FAM98CQ17RN3 349 aaKnown RBP25.28■■□□□ 1.64
HCFC2-205ENST00000550444 BTG4Q9NY30 223 aa25.28■■□□□ 1.64
HCFC2-205ENST00000550444 ANKARQ7Z5J8 1434 aa25.28■■□□□ 1.64
HCFC2-205ENST00000550444 BRWD3Q6RI45 1802 aa25.27■■□□□ 1.64
HCFC2-205ENST00000550444 GPRASP1Q5JY77 1395 aa25.27■■□□□ 1.64
HCFC2-205ENST00000550444 PLCH1Q4KWH8 1693 aa25.24■■□□□ 1.63
HCFC2-205ENST00000550444 DLC1Q96QB1 1528 aa25.24■■□□□ 1.63
HCFC2-205ENST00000550444 PAK3O75914 559 aaPredicted RBP25.24■■□□□ 1.63
HCFC2-205ENST00000550444 DCAF11Q8TEB1 546 aa25.24■■□□□ 1.63
HCFC2-205ENST00000550444 PRR36Q9H6K5 1346 aa25.23■■□□□ 1.63
HCFC2-205ENST00000550444 NGDNQ8NEJ9 315 aaKnown RBP25.23■■□□□ 1.63
HCFC2-205ENST00000550444 RAB3GAP2Q9H2M9 1393 aa25.22■■□□□ 1.63
HCFC2-205ENST00000550444 NWD2Q9ULI1 1742 aa25.22■■□□□ 1.63
HCFC2-205ENST00000550444 WASLO00401 505 aaPredicted RBP25.21■■□□□ 1.63
HCFC2-205ENST00000550444 BAG6P46379 1132 aa25.21■■□□□ 1.63
HCFC2-205ENST00000550444 EIF3AQ14152 1382 aaKnown RBP25.19■■□□□ 1.62
HCFC2-205ENST00000550444 PSDA5PKW4 1024 aaPredicted RBP25.19■■□□□ 1.62
HCFC2-205ENST00000550444 ABCA3Q99758 1704 aa25.19■■□□□ 1.62
HCFC2-205ENST00000550444 ADGRB1O14514 1584 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms