RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 CREBRFQ8IUR6 639 aa19.18■□□□□ 0.66
RBFOX1-212ENST00000550418 BCAR3O75815 825 aa19.18■□□□□ 0.66
RBFOX1-212ENST00000550418 NBPF8Q3BBV2 869 aa19.18■□□□□ 0.66
RBFOX1-212ENST00000550418 CHMP4CQ96CF2 233 aa19.18■□□□□ 0.66
RBFOX1-212ENST00000550418 TSPY26PQ9H489 355 aa19.18■□□□□ 0.66
RBFOX1-212ENST00000550418 LAMC3Q9Y6N6 1575 aa19.18■□□□□ 0.66
RBFOX1-212ENST00000550418 UQCRHLA0A096LP55 91 aa19.17■□□□□ 0.66
RBFOX1-212ENST00000550418 UQCRHP07919 91 aa19.17■□□□□ 0.66
RBFOX1-212ENST00000550418 RABEP1Q15276 862 aa19.17■□□□□ 0.66
RBFOX1-212ENST00000550418 GORABQ5T7V8 394 aa19.17■□□□□ 0.66
RBFOX1-212ENST00000550418 PPP2R1AP30153 589 aa19.16■□□□□ 0.66
RBFOX1-212ENST00000550418 ZSCAN30Q86W11 494 aa19.16■□□□□ 0.66
RBFOX1-212ENST00000550418 CIZ1Q9ULV3 898 aaPredicted RBP19.16■□□□□ 0.66
RBFOX1-212ENST00000550418 ROCK1Q13464 1354 aa19.16■□□□□ 0.66
RBFOX1-212ENST00000550418 DIAPH1O60610 1272 aaKnown RBP19.15■□□□□ 0.66
RBFOX1-212ENST00000550418 MNS1Q8NEH6 495 aa19.15■□□□□ 0.66
RBFOX1-212ENST00000550418 NUTM2FA1L443 756 aa19.15■□□□□ 0.66
RBFOX1-212ENST00000550418 TCP11L2Q8N4U5 519 aa19.15■□□□□ 0.66
RBFOX1-212ENST00000550418 EVC2Q86UK5 1308 aa19.14■□□□□ 0.66
RBFOX1-212ENST00000550418 LETM1O95202 739 aaPredicted RBP19.14■□□□□ 0.65
RBFOX1-212ENST00000550418 PCF11O94913 1555 aaKnown RBP19.14■□□□□ 0.65
RBFOX1-212ENST00000550418 ZNF608Q9ULD9 1512 aaPredicted RBP19.13■□□□□ 0.65
RBFOX1-212ENST00000550418 TPM1P09493 284 aa19.12■□□□□ 0.65
RBFOX1-212ENST00000550418 SYNJ2O15056 1496 aa19.12■□□□□ 0.65
RBFOX1-212ENST00000550418 TROQ12816 1431 aaPredicted RBP19.12■□□□□ 0.65
RBFOX1-212ENST00000550418 HFM1A2PYH4 1435 aa19.12■□□□□ 0.65
RBFOX1-212ENST00000550418 K7ELQ4 463 aaPredicted RBP19.12■□□□□ 0.65
RBFOX1-212ENST00000550418 EPRSP07814 1512 aaKnown RBP19.11■□□□□ 0.65
RBFOX1-212ENST00000550418 NEK4P51957 841 aa19.11■□□□□ 0.65
RBFOX1-212ENST00000550418 TPD52L1Q16890 204 aaPredicted RBP19.11■□□□□ 0.65
RBFOX1-212ENST00000550418 KIAA0586Q9BVV6 1533 aa19.11■□□□□ 0.65
RBFOX1-212ENST00000550418 NPHP1O15259 732 aa19.11■□□□□ 0.65
RBFOX1-212ENST00000550418 BCL11BQ9C0K0 894 aaPredicted RBP19.11■□□□□ 0.65
RBFOX1-212ENST00000550418 TSR1Q2NL82 804 aaKnown RBP19.11■□□□□ 0.65
RBFOX1-212ENST00000550418 MCM2P49736 904 aa19.11■□□□□ 0.65
RBFOX1-212ENST00000550418 NOM1Q5C9Z4 860 aaKnown RBP19.11■□□□□ 0.65
RBFOX1-212ENST00000550418 CWC22Q9HCG8 908 aaKnown RBP19.11■□□□□ 0.65
RBFOX1-212ENST00000550418 CCDC9Q9Y3X0 531 aaKnown RBP19.11■□□□□ 0.65
RBFOX1-212ENST00000550418 BIVM-ERCC5R4GMW8 1640 aa19.1■□□□□ 0.65
RBFOX1-212ENST00000550418 TRIM5Q9C035 493 aa19.1■□□□□ 0.65
RBFOX1-212ENST00000550418 EHBP1L1Q8N3D4 1523 aa19.1■□□□□ 0.65
RBFOX1-212ENST00000550418 RASSF8Q8NHQ8 419 aa19.1■□□□□ 0.65
RBFOX1-212ENST00000550418 GNAI1P63096 354 aa19.1■□□□□ 0.65
RBFOX1-212ENST00000550418 NINLQ9Y2I6 1382 aa19.09■□□□□ 0.65
RBFOX1-212ENST00000550418 CCDC70Q6NSX1 233 aa19.09■□□□□ 0.65
RBFOX1-212ENST00000550418 CCDC73Q6ZRK6 1079 aa19.09■□□□□ 0.65
RBFOX1-212ENST00000550418 RNF20Q5VTR2 975 aa19.08■□□□□ 0.65
RBFOX1-212ENST00000550418 ARHGAP5Q13017 1502 aa19.08■□□□□ 0.64
RBFOX1-212ENST00000550418 PES1O00541 588 aaKnown RBP19.08■□□□□ 0.64
RBFOX1-212ENST00000550418 PDCL3Q9H2J4 239 aa19.08■□□□□ 0.64
RBFOX1-212ENST00000550418 PLB1Q6P1J6 1458 aa19.08■□□□□ 0.64
RBFOX1-212ENST00000550418 SKAP1Q86WV1 359 aa19.08■□□□□ 0.64
RBFOX1-212ENST00000550418 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.08■□□□□ 0.64
RBFOX1-212ENST00000550418 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.07■□□□□ 0.64
RBFOX1-212ENST00000550418 NAIPQ13075 1403 aa19.07■□□□□ 0.64
RBFOX1-212ENST00000550418 NBPF1Q3BBV0 1214 aa19.07■□□□□ 0.64
RBFOX1-212ENST00000550418 GCC1Q96CN9 775 aa19.07■□□□□ 0.64
RBFOX1-212ENST00000550418 AMPHP49418 695 aa19.06■□□□□ 0.64
RBFOX1-212ENST00000550418 STAC3Q96MF2 364 aa19.06■□□□□ 0.64
RBFOX1-212ENST00000550418 HSP90B2PQ58FF3 399 aa19.06■□□□□ 0.64
RBFOX1-212ENST00000550418 MPNDQ8N594 471 aa19.06■□□□□ 0.64
RBFOX1-212ENST00000550418 CWC15Q9P013 229 aaKnown RBP19.06■□□□□ 0.64
RBFOX1-212ENST00000550418 IQGAP2Q13576 1575 aa19.05■□□□□ 0.64
RBFOX1-212ENST00000550418 EXOSC9Q06265 439 aaKnown RBP19.05■□□□□ 0.64
RBFOX1-212ENST00000550418 C9orf84Q5VXU9 1444 aa19.04■□□□□ 0.64
RBFOX1-212ENST00000550418 MTHFSP49914 203 aa19.04■□□□□ 0.64
RBFOX1-212ENST00000550418 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.04■□□□□ 0.64
RBFOX1-212ENST00000550418 COG3Q96JB2 828 aa19.04■□□□□ 0.64
RBFOX1-212ENST00000550418 ACBD3Q9H3P7 528 aa19.04■□□□□ 0.64
RBFOX1-212ENST00000550418 CPLX2Q6PUV4 134 aaKnown RBP19.03■□□□□ 0.64
RBFOX1-212ENST00000550418 ZMYND15Q9H091 742 aa19.03■□□□□ 0.64
RBFOX1-212ENST00000550418 IFIT2P09913 472 aaKnown RBP19.03■□□□□ 0.64
RBFOX1-212ENST00000550418 SPC24Q8NBT2 197 aa19.03■□□□□ 0.64
RBFOX1-212ENST00000550418 FBXW7Q969H0 707 aa19.03■□□□□ 0.64
RBFOX1-212ENST00000550418 TAF7LQ5H9L4 462 aa19.02■□□□□ 0.64
RBFOX1-212ENST00000550418 DAPK1P53355 1430 aa19.02■□□□□ 0.64
RBFOX1-212ENST00000550418 FIBPO43427 364 aa19.02■□□□□ 0.64
RBFOX1-212ENST00000550418 CCDC27Q2M243 656 aa19.02■□□□□ 0.64
RBFOX1-212ENST00000550418 HECW1Q76N89 1606 aa19.02■□□□□ 0.64
RBFOX1-212ENST00000550418 VGFO15240 615 aaPredicted RBP19.02■□□□□ 0.64
RBFOX1-212ENST00000550418 IPO7O95373 1038 aaKnown RBP19.02■□□□□ 0.64
RBFOX1-212ENST00000550418 TOMM22Q9NS69 142 aa19.02■□□□□ 0.64
RBFOX1-212ENST00000550418 MINK1Q8N4C8 1332 aaPredicted RBP19.02■□□□□ 0.64
RBFOX1-212ENST00000550418 CSB-PGBD3P0DP91 1061 aa19.02■□□□□ 0.63
RBFOX1-212ENST00000550418 FKBP5Q13451 457 aaPredicted RBP19.02■□□□□ 0.63
RBFOX1-212ENST00000550418 MVPQ14764 893 aaKnown RBP19.02■□□□□ 0.63
RBFOX1-212ENST00000550418 TMEM132EQ6IEE7 984 aa19.02■□□□□ 0.63
RBFOX1-212ENST00000550418 NAT10Q9H0A0 1025 aaKnown RBP19.02■□□□□ 0.63
RBFOX1-212ENST00000550418 CCDC112Q8NEF3 446 aa19.01■□□□□ 0.63
RBFOX1-212ENST00000550418 ZNF330Q9Y3S2 320 aaPredicted RBP19■□□□□ 0.63
RBFOX1-212ENST00000550418 C20orf194Q5TEA3 1177 aa19■□□□□ 0.63
RBFOX1-212ENST00000550418 C11orf95C9JLR9 678 aaPredicted RBP19■□□□□ 0.63
RBFOX1-212ENST00000550418 SDF4Q9BRK5 362 aa19■□□□□ 0.63
RBFOX1-212ENST00000550418 CPLX1O14810 134 aa18.99■□□□□ 0.63
RBFOX1-212ENST00000550418 CFAP70Q5T0N1 1121 aa18.99■□□□□ 0.63
RBFOX1-212ENST00000550418 TBC1D2Q9BYX2 928 aa18.98■□□□□ 0.63
RBFOX1-212ENST00000550418 C9orf78Q9NZ63 289 aaPredicted RBP18.98■□□□□ 0.63
RBFOX1-212ENST00000550418 GRIN2AQ12879 1464 aa18.98■□□□□ 0.63
RBFOX1-212ENST00000550418 SLFN5Q08AF3 891 aa18.98■□□□□ 0.63
RBFOX1-212ENST00000550418 LTV1Q96GA3 475 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms