RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 ZNF326Q5BKZ1 582 aaKnown RBP10.35□□□□□ -0.75
CBX5-204ENST00000550411 BRINP3Q76B58 766 aa10.35□□□□□ -0.75
CBX5-204ENST00000550411 SETD5Q9C0A6 1442 aa10.34□□□□□ -0.75
CBX5-204ENST00000550411 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.34□□□□□ -0.75
CBX5-204ENST00000550411 ADGRL3Q9HAR2 1447 aa10.33□□□□□ -0.76
CBX5-204ENST00000550411 TRIM52Q96A61 297 aa10.33□□□□□ -0.76
CBX5-204ENST00000550411 METP08581 1390 aa10.33□□□□□ -0.76
CBX5-204ENST00000550411 CDK12Q9NYV4 1490 aaPredicted RBP10.33□□□□□ -0.76
CBX5-204ENST00000550411 RAB3GAP2Q9H2M9 1393 aa10.32□□□□□ -0.76
CBX5-204ENST00000550411 NUTM2BA6NNL0 878 aaPredicted RBP10.32□□□□□ -0.76
CBX5-204ENST00000550411 NUTM2EB1AL46 878 aaPredicted RBP10.32□□□□□ -0.76
CBX5-204ENST00000550411 NUTM2AQ8IVF1 878 aaPredicted RBP10.32□□□□□ -0.76
CBX5-204ENST00000550411 FMN2Q9NZ56 1722 aa10.32□□□□□ -0.76
CBX5-204ENST00000550411 RXRBP28702 533 aa10.3□□□□□ -0.76
CBX5-204ENST00000550411 UPF1Q92900 1129 aaKnown RBP eCLIP10.3□□□□□ -0.76
CBX5-204ENST00000550411 LRRC59Q96AG4 307 aaKnown RBP10.3□□□□□ -0.76
CBX5-204ENST00000550411 KIF1AQ12756 1690 aa10.3□□□□□ -0.76
CBX5-204ENST00000550411 SPATA31E1Q6ZUB1 1445 aa10.3□□□□□ -0.76
CBX5-204ENST00000550411 AFF2P51816 1311 aa10.3□□□□□ -0.76
CBX5-204ENST00000550411 ABCA3Q99758 1704 aa10.3□□□□□ -0.76
CBX5-204ENST00000550411 ZNF219Q9P2Y4 722 aaPredicted RBP10.29□□□□□ -0.76
CBX5-204ENST00000550411 PTCH1Q13635 1447 aa10.29□□□□□ -0.76
CBX5-204ENST00000550411 CDC42BPGQ6DT37 1551 aa10.29□□□□□ -0.76
CBX5-204ENST00000550411 PNPLA6Q8IY17 1366 aa10.28□□□□□ -0.76
CBX5-204ENST00000550411 C1orf167Q5SNV9 1468 aa10.28□□□□□ -0.76
CBX5-204ENST00000550411 PLCH1Q4KWH8 1693 aa10.28□□□□□ -0.76
CBX5-204ENST00000550411 DDX17Q92841 729 aaKnown RBP10.27□□□□□ -0.77
CBX5-204ENST00000550411 NWD2Q9ULI1 1742 aa10.27□□□□□ -0.77
CBX5-204ENST00000550411 RGS12O14924 1447 aa10.26□□□□□ -0.77
CBX5-204ENST00000550411 MPHOSPH9Q99550 1183 aa10.26□□□□□ -0.77
CBX5-204ENST00000550411 CCDC144AA2RUR9 1427 aa10.25□□□□□ -0.77
CBX5-204ENST00000550411 PRAG1Q86YV5 1406 aa10.25□□□□□ -0.77
CBX5-204ENST00000550411 VGFO15240 615 aaPredicted RBP10.25□□□□□ -0.77
CBX5-204ENST00000550411 C8orf37Q96NL8 207 aa10.25□□□□□ -0.77
CBX5-204ENST00000550411 RBM6P78332 1123 aaKnown RBP10.24□□□□□ -0.77
CBX5-204ENST00000550411 QTRT2Q9H974 415 aaKnown RBP10.24□□□□□ -0.77
CBX5-204ENST00000550411 ROBO2Q9HCK4 1378 aa10.24□□□□□ -0.77
CBX5-204ENST00000550411 SOS2Q07890 1332 aaPredicted RBP10.23□□□□□ -0.77
CBX5-204ENST00000550411 RPGRIP1LQ68CZ1 1315 aa10.23□□□□□ -0.77
CBX5-204ENST00000550411 ADAMTS2O95450 1211 aa10.22□□□□□ -0.77
CBX5-204ENST00000550411 NGLY1Q96IV0 654 aa10.22□□□□□ -0.77
CBX5-204ENST00000550411 ORAI2Q96SN7 254 aa10.22□□□□□ -0.77
CBX5-204ENST00000550411 FBXO3Q9UK99 471 aa10.22□□□□□ -0.77
CBX5-204ENST00000550411 ANKRD30BQ9BXX2 1392 aa10.22□□□□□ -0.77
CBX5-204ENST00000550411 NRXN1Q9ULB1 1477 aa10.22□□□□□ -0.77
CBX5-204ENST00000550411 USP32Q8NFA0 1604 aa10.22□□□□□ -0.77
CBX5-204ENST00000550411 ITSN1Q15811 1721 aa10.21□□□□□ -0.77
CBX5-204ENST00000550411 SPDYE4A6NLX3 237 aa10.21□□□□□ -0.77
CBX5-204ENST00000550411 PROM2Q8N271 834 aa10.21□□□□□ -0.77
CBX5-204ENST00000550411 PIK3C2GO75747 1445 aa10.21□□□□□ -0.78
CBX5-204ENST00000550411 PXDNQ92626 1479 aa10.21□□□□□ -0.78
CBX5-204ENST00000550411 MYOM2P54296 1465 aa10.2□□□□□ -0.78
CBX5-204ENST00000550411 EP400Q96L91 3159 aa10.2□□□□□ -0.78
CBX5-204ENST00000550411 CRYBG1Q9Y4K1 1723 aa10.19□□□□□ -0.78
CBX5-204ENST00000550411 GLI3P10071 1580 aa10.19□□□□□ -0.78
CBX5-204ENST00000550411 ADGRF5Q8IZF2 1346 aa10.19□□□□□ -0.78
CBX5-204ENST00000550411 PLCB2Q00722 1185 aa10.19□□□□□ -0.78
CBX5-204ENST00000550411 MKRN4PQ13434 485 aaPredicted RBP10.19□□□□□ -0.78
CBX5-204ENST00000550411 USP21Q9UK80 565 aa10.19□□□□□ -0.78
CBX5-204ENST00000550411 NRAPQ86VF7 1730 aa10.19□□□□□ -0.78
CBX5-204ENST00000550411 TRPM3Q9HCF6 1732 aaPredicted RBP10.19□□□□□ -0.78
CBX5-204ENST00000550411 ATRNO75882 1429 aa10.18□□□□□ -0.78
CBX5-204ENST00000550411 ATAD2Q6PL18 1390 aa10.18□□□□□ -0.78
CBX5-204ENST00000550411 TRPC5Q9UL62 973 aaPredicted RBP10.18□□□□□ -0.78
CBX5-204ENST00000550411 RGPD1P0DJD0 1748 aa10.18□□□□□ -0.78
CBX5-204ENST00000550411 ALS2Q96Q42 1657 aa10.18□□□□□ -0.78
CBX5-204ENST00000550411 TECPR2O15040 1411 aa10.17□□□□□ -0.78
CBX5-204ENST00000550411 NPHP3Q7Z494 1330 aa10.17□□□□□ -0.78
CBX5-204ENST00000550411 ACIN1Q9UKV3 1341 aaKnown RBP10.17□□□□□ -0.78
CBX5-204ENST00000550411 HRCP23327 699 aa10.17□□□□□ -0.78
CBX5-204ENST00000550411 ESCO1Q5FWF5 840 aa10.17□□□□□ -0.78
CBX5-204ENST00000550411 FNBP4Q8N3X1 1017 aaPredicted RBP10.16□□□□□ -0.78
CBX5-204ENST00000550411 ARHGEF28Q8N1W1 1705 aaKnown RBP10.16□□□□□ -0.78
CBX5-204ENST00000550411 LRPPRCP42704 1394 aaKnown RBP10.15□□□□□ -0.78
CBX5-204ENST00000550411 ADGRB1O14514 1584 aa10.15□□□□□ -0.78
CBX5-204ENST00000550411 VASPP50552 380 aaPredicted RBP10.15□□□□□ -0.78
CBX5-204ENST00000550411 RGL3Q3MIN7 710 aa10.15□□□□□ -0.78
CBX5-204ENST00000550411 BCL9LQ86UU0 1499 aa10.15□□□□□ -0.78
CBX5-204ENST00000550411 COL14A1Q05707 1796 aaKnown RBP10.14□□□□□ -0.79
CBX5-204ENST00000550411 NUTM2FA1L443 756 aa10.14□□□□□ -0.79
CBX5-204ENST00000550411 FOXO3O43524 673 aa10.14□□□□□ -0.79
CBX5-204ENST00000550411 STK26Q9P289 416 aa10.14□□□□□ -0.79
CBX5-204ENST00000550411 YTHDC2Q9H6S0 1430 aaKnown RBP10.14□□□□□ -0.79
CBX5-204ENST00000550411 ADGRB2O60241 1585 aa10.14□□□□□ -0.79
CBX5-204ENST00000550411 DHX57Q6P158 1386 aaKnown RBP10.14□□□□□ -0.79
CBX5-204ENST00000550411 XPCQ01831 940 aaPredicted RBP10.13□□□□□ -0.79
CBX5-204ENST00000550411 WAPLQ7Z5K2 1190 aa10.13□□□□□ -0.79
CBX5-204ENST00000550411 RNF39Q9H2S5 420 aa10.13□□□□□ -0.79
CBX5-204ENST00000550411 KAT6BQ8WYB5 2073 aa10.13□□□□□ -0.79
CBX5-204ENST00000550411 ABCC11Q96J66 1382 aa10.13□□□□□ -0.79
CBX5-204ENST00000550411 PLEKHH1Q9ULM0 1364 aa10.13□□□□□ -0.79
CBX5-204ENST00000550411 SLIT2O94813 1529 aa10.12□□□□□ -0.79
CBX5-204ENST00000550411 PHRF1Q9P1Y6 1649 aaKnown RBP10.12□□□□□ -0.79
CBX5-204ENST00000550411 TNS1Q9HBL0 1735 aaKnown RBP10.12□□□□□ -0.79
CBX5-204ENST00000550411 TMEM132EQ6IEE7 984 aa10.11□□□□□ -0.79
CBX5-204ENST00000550411 GJD4Q96KN9 370 aaPredicted RBP10.11□□□□□ -0.79
CBX5-204ENST00000550411 SBF2Q86WG5 1849 aa10.11□□□□□ -0.79
CBX5-204ENST00000550411 RALGAPBQ86X10 1494 aa10.1□□□□□ -0.79
CBX5-204ENST00000550411 CCDC125Q86Z20 511 aa10.1□□□□□ -0.79
CBX5-204ENST00000550411 DLC1Q96QB1 1528 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms