RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 TECPR2O15040 1411 aa19.77■□□□□ 0.76
CACNB3-216ENST00000550391 PTPRUQ92729 1446 aa19.77■□□□□ 0.76
CACNB3-216ENST00000550391 STK26Q9P289 416 aa19.77■□□□□ 0.76
CACNB3-216ENST00000550391 TESK2Q96S53 571 aa19.76■□□□□ 0.75
CACNB3-216ENST00000550391 QRICH2Q9H0J4 1663 aa19.75■□□□□ 0.75
CACNB3-216ENST00000550391 ROBO1Q9Y6N7 1651 aa19.75■□□□□ 0.75
CACNB3-216ENST00000550391 CHD2O14647 1828 aaKnown RBP19.75■□□□□ 0.75
CACNB3-216ENST00000550391 XRN1Q8IZH2 1706 aaKnown RBP19.75■□□□□ 0.75
CACNB3-216ENST00000550391 CENPJQ9HC77 1338 aaPredicted RBP19.75■□□□□ 0.75
CACNB3-216ENST00000550391 RXRBP28702 533 aa19.74■□□□□ 0.75
CACNB3-216ENST00000550391 SIRT1Q96EB6 747 aa19.74■□□□□ 0.75
CACNB3-216ENST00000550391 SBNO2Q9Y2G9 1366 aa19.73■□□□□ 0.75
CACNB3-216ENST00000550391 CDK12Q9NYV4 1490 aaPredicted RBP19.73■□□□□ 0.75
CACNB3-216ENST00000550391 C11orf95C9JLR9 678 aaPredicted RBP19.72■□□□□ 0.75
CACNB3-216ENST00000550391 AMOTL2Q9Y2J4 779 aa19.72■□□□□ 0.75
CACNB3-216ENST00000550391 MEX3CQ5U5Q3 659 aaKnown RBP19.71■□□□□ 0.75
CACNB3-216ENST00000550391 SPATA31A6Q5VVP1 1343 aa19.71■□□□□ 0.75
CACNB3-216ENST00000550391 PTCH1Q13635 1447 aa19.7■□□□□ 0.74
CACNB3-216ENST00000550391 SLC24A1O60721 1099 aa19.7■□□□□ 0.74
CACNB3-216ENST00000550391 PRAM1Q96QH2 718 aa19.7■□□□□ 0.74
CACNB3-216ENST00000550391 NWD1Q149M9 1564 aa19.7■□□□□ 0.74
CACNB3-216ENST00000550391 ROBO2Q9HCK4 1378 aa19.7■□□□□ 0.74
CACNB3-216ENST00000550391 POGKQ9P215 609 aa19.68■□□□□ 0.74
CACNB3-216ENST00000550391 WASHC2AQ641Q2 1341 aa19.68■□□□□ 0.74
CACNB3-216ENST00000550391 TMEM94Q12767 1356 aa19.68■□□□□ 0.74
CACNB3-216ENST00000550391 PLEKHH1Q9ULM0 1364 aa19.68■□□□□ 0.74
CACNB3-216ENST00000550391 TMF1P82094 1093 aa19.67■□□□□ 0.74
CACNB3-216ENST00000550391 WAPLQ7Z5K2 1190 aa19.67■□□□□ 0.74
CACNB3-216ENST00000550391 KIF7Q2M1P5 1343 aa19.67■□□□□ 0.74
CACNB3-216ENST00000550391 CCDC7Q96M83 1385 aa19.67■□□□□ 0.74
CACNB3-216ENST00000550391 PHLPP1O60346 1717 aa19.66■□□□□ 0.74
CACNB3-216ENST00000550391 KCNA6P17658 529 aa19.66■□□□□ 0.74
CACNB3-216ENST00000550391 SAFB2Q14151 953 aaKnown RBP eCLIP19.64■□□□□ 0.73
CACNB3-216ENST00000550391 ZRANB1Q9UGI0 708 aa19.64■□□□□ 0.73
CACNB3-216ENST00000550391 TULP4Q9NRJ4 1543 aa19.63■□□□□ 0.73
CACNB3-216ENST00000550391 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.62■□□□□ 0.73
CACNB3-216ENST00000550391 SLAIN2Q9P270 581 aa19.62■□□□□ 0.73
CACNB3-216ENST00000550391 MINK1Q8N4C8 1332 aaPredicted RBP19.61■□□□□ 0.73
CACNB3-216ENST00000550391 CDCA8Q53HL2 280 aa19.61■□□□□ 0.73
CACNB3-216ENST00000550391 PROSER2Q86WR7 435 aaPredicted RBP19.61■□□□□ 0.73
CACNB3-216ENST00000550391 ADGRB2O60241 1585 aa19.61■□□□□ 0.73
CACNB3-216ENST00000550391 NKTRP30414 1462 aaKnown RBP19.6■□□□□ 0.73
CACNB3-216ENST00000550391 LRP6O75581 1613 aa19.6■□□□□ 0.73
CACNB3-216ENST00000550391 EVC2Q86UK5 1308 aa19.59■□□□□ 0.73
CACNB3-216ENST00000550391 MSH6P52701 1360 aa19.58■□□□□ 0.73
CACNB3-216ENST00000550391 PUS7Q96PZ0 661 aaKnown RBP19.57■□□□□ 0.72
CACNB3-216ENST00000550391 POLR3GLQ9BT43 218 aa19.57■□□□□ 0.72
CACNB3-216ENST00000550391 COL16A1Q07092 1604 aaPredicted RBP19.55■□□□□ 0.72
CACNB3-216ENST00000550391 DDX10Q13206 875 aaKnown RBP19.55■□□□□ 0.72
CACNB3-216ENST00000550391 MYOM1P52179 1685 aa19.55■□□□□ 0.72
CACNB3-216ENST00000550391 NALCNQ8IZF0 1738 aa19.54■□□□□ 0.72
CACNB3-216ENST00000550391 WASLO00401 505 aaPredicted RBP19.53■□□□□ 0.72
CACNB3-216ENST00000550391 RBM33Q96EV2 1170 aaKnown RBP19.53■□□□□ 0.72
CACNB3-216ENST00000550391 CDK19Q9BWU1 502 aa19.53■□□□□ 0.72
CACNB3-216ENST00000550391 DIEXFQ68CQ4 756 aaKnown RBP19.52■□□□□ 0.72
CACNB3-216ENST00000550391 CABP2Q9NPB3 220 aa19.52■□□□□ 0.72
CACNB3-216ENST00000550391 NUTM2BA6NNL0 878 aaPredicted RBP19.51■□□□□ 0.71
CACNB3-216ENST00000550391 NUTM2EB1AL46 878 aaPredicted RBP19.51■□□□□ 0.71
CACNB3-216ENST00000550391 RBM6P78332 1123 aaKnown RBP19.51■□□□□ 0.71
CACNB3-216ENST00000550391 SRPK2P78362 688 aaKnown RBP19.51■□□□□ 0.71
CACNB3-216ENST00000550391 NUTM2AQ8IVF1 878 aaPredicted RBP19.51■□□□□ 0.71
CACNB3-216ENST00000550391 ADGRL3Q9HAR2 1447 aa19.51■□□□□ 0.71
CACNB3-216ENST00000550391 NCOA3Q9Y6Q9 1424 aa19.51■□□□□ 0.71
CACNB3-216ENST00000550391 SHPRHQ149N8 1683 aa19.49■□□□□ 0.71
CACNB3-216ENST00000550391 CDC42BPGQ6DT37 1551 aa19.49■□□□□ 0.71
CACNB3-216ENST00000550391 ATAD2Q6PL18 1390 aa19.49■□□□□ 0.71
CACNB3-216ENST00000550391 AFF2P51816 1311 aa19.48■□□□□ 0.71
CACNB3-216ENST00000550391 FMN2Q9NZ56 1722 aa19.48■□□□□ 0.71
CACNB3-216ENST00000550391 RGS12O14924 1447 aa19.47■□□□□ 0.71
CACNB3-216ENST00000550391 USP32Q8NFA0 1604 aa19.46■□□□□ 0.71
CACNB3-216ENST00000550391 ATP7BP35670 1465 aa19.46■□□□□ 0.71
CACNB3-216ENST00000550391 NINLQ9Y2I6 1382 aa19.45■□□□□ 0.7
CACNB3-216ENST00000550391 QTRT2Q9H974 415 aaKnown RBP19.45■□□□□ 0.7
CACNB3-216ENST00000550391 TOPAZ1Q8N9V7 1692 aa19.45■□□□□ 0.7
CACNB3-216ENST00000550391 NGLY1Q96IV0 654 aa19.44■□□□□ 0.7
CACNB3-216ENST00000550391 PRR36Q9H6K5 1346 aa19.44■□□□□ 0.7
CACNB3-216ENST00000550391 C14orf37Q86TY3 774 aa19.43■□□□□ 0.7
CACNB3-216ENST00000550391 CCDC125Q86Z20 511 aa19.43■□□□□ 0.7
CACNB3-216ENST00000550391 NUDT16Q96DE0 195 aaKnown RBP19.43■□□□□ 0.7
CACNB3-216ENST00000550391 AHDC1Q5TGY3 1603 aaPredicted RBP19.43■□□□□ 0.7
CACNB3-216ENST00000550391 ANKARQ7Z5J8 1434 aa19.42■□□□□ 0.7
CACNB3-216ENST00000550391 TMC1Q8TDI8 760 aa19.42■□□□□ 0.7
CACNB3-216ENST00000550391 SLC12A5Q9H2X9 1139 aa19.42■□□□□ 0.7
CACNB3-216ENST00000550391 C19orf44Q9H6X5 657 aa19.42■□□□□ 0.7
CACNB3-216ENST00000550391 PANK3Q9H999 370 aa19.42■□□□□ 0.7
CACNB3-216ENST00000550391 CCDC61Q9Y6R9 512 aa19.41■□□□□ 0.7
CACNB3-216ENST00000550391 ITSN1Q15811 1721 aa19.41■□□□□ 0.7
CACNB3-216ENST00000550391 DCCP43146 1447 aa19.41■□□□□ 0.7
CACNB3-216ENST00000550391 RGPD8O14715 1765 aaPredicted RBP19.4■□□□□ 0.7
CACNB3-216ENST00000550391 PPIP5K1Q6PFW1 1433 aa19.4■□□□□ 0.7
CACNB3-216ENST00000550391 PER1O15534 1290 aaPredicted RBP19.39■□□□□ 0.69
CACNB3-216ENST00000550391 CABP1Q9NZU7 370 aa19.39■□□□□ 0.69
CACNB3-216ENST00000550391 ANKRD36BQ8N2N9 1353 aa19.39■□□□□ 0.69
CACNB3-216ENST00000550391 CD163L1Q9NR16 1453 aa19.39■□□□□ 0.69
CACNB3-216ENST00000550391 NUTM2FA1L443 756 aa19.38■□□□□ 0.69
CACNB3-216ENST00000550391 CADPS2Q86UW7 1296 aa19.38■□□□□ 0.69
CACNB3-216ENST00000550391 PLEKHG3A1L390 1219 aa19.36■□□□□ 0.69
CACNB3-216ENST00000550391 A0A1W2PP64 1363 aa19.35■□□□□ 0.69
CACNB3-216ENST00000550391 AKAP12Q02952 1782 aa19.35■□□□□ 0.69
CACNB3-216ENST00000550391 CARD14Q9BXL6 1004 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms