RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, humanhuman

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-208ENST00000550173 PIK3C2GO75747 1445 aa29.43■■■□□ 2.3
SLC38A1-208ENST00000550173 AFF2P51816 1311 aa29.43■■■□□ 2.3
SLC38A1-208ENST00000550173 TECPR2O15040 1411 aa29.42■■■□□ 2.3
SLC38A1-208ENST00000550173 CDC42BPGQ6DT37 1551 aa29.42■■■□□ 2.3
SLC38A1-208ENST00000550173 SOS2Q07890 1332 aaPredicted RBP29.42■■■□□ 2.3
SLC38A1-208ENST00000550173 ABCC11Q96J66 1382 aa29.41■■■□□ 2.3
SLC38A1-208ENST00000550173 RXRBP28702 533 aa29.4■■■□□ 2.3
SLC38A1-208ENST00000550173 ESCO1Q5FWF5 840 aa29.4■■■□□ 2.3
SLC38A1-208ENST00000550173 C8orf37Q96NL8 207 aa29.4■■■□□ 2.3
SLC38A1-208ENST00000550173 KNDC1Q76NI1 1749 aa29.37■■■□□ 2.29
SLC38A1-208ENST00000550173 YTHDC2Q9H6S0 1430 aaKnown RBP29.37■■■□□ 2.29
SLC38A1-208ENST00000550173 PLEKHH1Q9ULM0 1364 aa29.36■■■□□ 2.29
SLC38A1-208ENST00000550173 NUTM2FA1L443 756 aa29.35■■■□□ 2.29
SLC38A1-208ENST00000550173 ADAMTS2O95450 1211 aa29.35■■■□□ 2.29
SLC38A1-208ENST00000550173 C14orf93Q9H972 538 aaKnown RBP29.34■■■□□ 2.29
SLC38A1-208ENST00000550173 NPHP3Q7Z494 1330 aa29.34■■■□□ 2.29
SLC38A1-208ENST00000550173 CFAP70Q5T0N1 1121 aa29.32■■■□□ 2.28
SLC38A1-208ENST00000550173 NGLY1Q96IV0 654 aa29.32■■■□□ 2.28
SLC38A1-208ENST00000550173 MYOM2P54296 1465 aa29.31■■■□□ 2.28
SLC38A1-208ENST00000550173 NRXN1Q9ULB1 1477 aa29.3■■■□□ 2.28
SLC38A1-208ENST00000550173 FOXO3O43524 673 aa29.3■■■□□ 2.28
SLC38A1-208ENST00000550173 QTRT2Q9H974 415 aaKnown RBP29.3■■■□□ 2.28
SLC38A1-208ENST00000550173 DHX57Q6P158 1386 aaKnown RBP29.29■■■□□ 2.28
SLC38A1-208ENST00000550173 SIRT1Q96EB6 747 aa29.29■■■□□ 2.28
SLC38A1-208ENST00000550173 XPCQ01831 940 aaPredicted RBP29.28■■■□□ 2.28
SLC38A1-208ENST00000550173 CDK12Q9NYV4 1490 aaPredicted RBP29.27■■■□□ 2.28
SLC38A1-208ENST00000550173 PXDNQ92626 1479 aa29.26■■■□□ 2.27
SLC38A1-208ENST00000550173 FMN2Q9NZ56 1722 aa29.25■■■□□ 2.27
SLC38A1-208ENST00000550173 COL22A1Q8NFW1 1626 aaPredicted RBP29.24■■■□□ 2.27
SLC38A1-208ENST00000550173 RBM6P78332 1123 aaKnown RBP29.24■■■□□ 2.27
SLC38A1-208ENST00000550173 UPF1Q92900 1129 aaKnown RBP eCLIP29.23■■■□□ 2.27
SLC38A1-208ENST00000550173 SAFB2Q14151 953 aaKnown RBP eCLIP29.21■■■□□ 2.27
SLC38A1-208ENST00000550173 PRAM1Q96QH2 718 aa29.2■■■□□ 2.26
SLC38A1-208ENST00000550173 USP21Q9UK80 565 aa29.2■■■□□ 2.26
SLC38A1-208ENST00000550173 HRCP23327 699 aa29.19■■■□□ 2.26
SLC38A1-208ENST00000550173 KDM2AQ9Y2K7 1162 aa29.18■■■□□ 2.26
SLC38A1-208ENST00000550173 KIF1AQ12756 1690 aa29.18■■■□□ 2.26
SLC38A1-208ENST00000550173 POGKQ9P215 609 aa29.17■■■□□ 2.26
SLC38A1-208ENST00000550173 RGS12O14924 1447 aa29.17■■■□□ 2.26
SLC38A1-208ENST00000550173 FNBP4Q8N3X1 1017 aaPredicted RBP29.16■■■□□ 2.26
SLC38A1-208ENST00000550173 DCAF11Q8TEB1 546 aa29.16■■■□□ 2.26
SLC38A1-208ENST00000550173 KRT28Q7Z3Y7 464 aa29.15■■■□□ 2.26
SLC38A1-208ENST00000550173 TRPC5Q9UL62 973 aaPredicted RBP29.15■■■□□ 2.26
SLC38A1-208ENST00000550173 RGPD8O14715 1765 aaPredicted RBP29.15■■■□□ 2.26
SLC38A1-208ENST00000550173 PHF8Q9UPP1 1060 aa29.14■■■□□ 2.26
SLC38A1-208ENST00000550173 DLC1Q96QB1 1528 aa29.14■■■□□ 2.25
SLC38A1-208ENST00000550173 SPATA31A3Q5VYP0 1347 aa29.13■■■□□ 2.25
SLC38A1-208ENST00000550173 TRAK1Q9UPV9 953 aa29.12■■■□□ 2.25
SLC38A1-208ENST00000550173 ADGRB1O14514 1584 aa29.11■■■□□ 2.25
SLC38A1-208ENST00000550173 MARF1Q9Y4F3 1742 aaKnown RBP29.11■■■□□ 2.25
SLC38A1-208ENST00000550173 STAC3Q96MF2 364 aa29.09■■■□□ 2.25
SLC38A1-208ENST00000550173 PSME1Q06323 249 aa29.08■■■□□ 2.25
SLC38A1-208ENST00000550173 ATRNO75882 1429 aa29.08■■■□□ 2.25
SLC38A1-208ENST00000550173 HIRIP3Q9BW71 556 aaPredicted RBP29.05■■■□□ 2.24
SLC38A1-208ENST00000550173 BCL9LQ86UU0 1499 aa29.04■■■□□ 2.24
SLC38A1-208ENST00000550173 MINK1Q8N4C8 1332 aaPredicted RBP29.04■■■□□ 2.24
SLC38A1-208ENST00000550173 ADGRB2O60241 1585 aa29.04■■■□□ 2.24
SLC38A1-208ENST00000550173 TNS3Q68CZ2 1445 aa29.03■■■□□ 2.24
SLC38A1-208ENST00000550173 ANKARQ7Z5J8 1434 aa29.03■■■□□ 2.24
SLC38A1-208ENST00000550173 PMFBP1Q8TBY8 1022 aa29.03■■■□□ 2.24
SLC38A1-208ENST00000550173 HAP1P54257 671 aaPredicted RBP29.02■■■□□ 2.24
SLC38A1-208ENST00000550173 LMOD2Q6P5Q4 547 aa29.01■■■□□ 2.23
SLC38A1-208ENST00000550173 USP32Q8NFA0 1604 aa29.01■■■□□ 2.23
SLC38A1-208ENST00000550173 PLEKHG5O94827 1062 aa29■■■□□ 2.23
SLC38A1-208ENST00000550173 SBNO1A3KN83 1393 aa29■■■□□ 2.23
SLC38A1-208ENST00000550173 CABLES1Q8TDN4 633 aa28.98■■■□□ 2.23
SLC38A1-208ENST00000550173 GJD4Q96KN9 370 aaPredicted RBP28.97■■■□□ 2.23
SLC38A1-208ENST00000550173 EIF3AQ14152 1382 aaKnown RBP28.97■■■□□ 2.23
SLC38A1-208ENST00000550173 ATAD2Q6PL18 1390 aa28.97■■■□□ 2.23
SLC38A1-208ENST00000550173 UNC5CLQ8IV45 518 aa28.96■■■□□ 2.23
SLC38A1-208ENST00000550173 ARHGEF10O15013 1369 aa28.96■■■□□ 2.23
SLC38A1-208ENST00000550173 SLIT2O94813 1529 aa28.95■■■□□ 2.23
SLC38A1-208ENST00000550173 WASLO00401 505 aaPredicted RBP28.95■■■□□ 2.22
SLC38A1-208ENST00000550173 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.94■■■□□ 2.22
SLC38A1-208ENST00000550173 PRR36Q9H6K5 1346 aa28.94■■■□□ 2.22
SLC38A1-208ENST00000550173 TULP4Q9NRJ4 1543 aa28.93■■■□□ 2.22
SLC38A1-208ENST00000550173 GPRASP1Q5JY77 1395 aa28.91■■■□□ 2.22
SLC38A1-208ENST00000550173 ARHGEF28Q8N1W1 1705 aaKnown RBP28.91■■■□□ 2.22
SLC38A1-208ENST00000550173 ABCA3Q99758 1704 aa28.89■■■□□ 2.21
SLC38A1-208ENST00000550173 RALGAPBQ86X10 1494 aa28.88■■■□□ 2.21
SLC38A1-208ENST00000550173 TRPM3Q9HCF6 1732 aaPredicted RBP28.87■■■□□ 2.21
SLC38A1-208ENST00000550173 NGDNQ8NEJ9 315 aaKnown RBP28.87■■■□□ 2.21
SLC38A1-208ENST00000550173 GLI3P10071 1580 aa28.86■■■□□ 2.21
SLC38A1-208ENST00000550173 PLCH1Q4KWH8 1693 aa28.84■■■□□ 2.21
SLC38A1-208ENST00000550173 KIAA1210Q9ULL0 1709 aa28.83■■■□□ 2.21
SLC38A1-208ENST00000550173 FAM83GA6ND36 823 aa28.82■■■□□ 2.2
SLC38A1-208ENST00000550173 VPS72Q15906 364 aa28.82■■■□□ 2.2
SLC38A1-208ENST00000550173 NUDT16Q96DE0 195 aaKnown RBP28.82■■■□□ 2.2
SLC38A1-208ENST00000550173 CCDC9Q9Y3X0 531 aaKnown RBP28.82■■■□□ 2.2
SLC38A1-208ENST00000550173 ALS2Q96Q42 1657 aa28.82■■■□□ 2.2
SLC38A1-208ENST00000550173 NWD2Q9ULI1 1742 aa28.82■■■□□ 2.2
SLC38A1-208ENST00000550173 PAK3O75914 559 aaPredicted RBP28.81■■■□□ 2.2
SLC38A1-208ENST00000550173 CDK19Q9BWU1 502 aa28.8■■■□□ 2.2
SLC38A1-208ENST00000550173 ITSN1Q15811 1721 aa28.8■■■□□ 2.2
SLC38A1-208ENST00000550173 ATP7BP35670 1465 aa28.79■■■□□ 2.2
SLC38A1-208ENST00000550173 NBPF1Q3BBV0 1214 aa28.79■■■□□ 2.2
SLC38A1-208ENST00000550173 CCDC125Q86Z20 511 aa28.76■■■□□ 2.19
SLC38A1-208ENST00000550173 SEPT12Q8IYM1 358 aa28.76■■■□□ 2.19
SLC38A1-208ENST00000550173 BRWD3Q6RI45 1802 aa28.74■■■□□ 2.19
SLC38A1-208ENST00000550173 BTG4Q9NY30 223 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms