RNA–Protein interactions for RNA: ENST00000549947.1

CNOT2-221, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 489 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-221ENST00000549947 POLR3EQ9NVU0 708 aa14.09□□□□□ -0.15
CNOT2-221ENST00000549947 SALL2Q9Y467 1007 aaPredicted RBP14.09□□□□□ -0.15
CNOT2-221ENST00000549947 FAM160A2Q8N612 972 aaPredicted RBP14.08□□□□□ -0.16
CNOT2-221ENST00000549947 Q3C1V9 767 aa14.07□□□□□ -0.16
CNOT2-221ENST00000549947 CLK2P49760 499 aaKnown RBP14.06□□□□□ -0.16
CNOT2-221ENST00000549947 SH3D19Q5HYK7 790 aa14.06□□□□□ -0.16
CNOT2-221ENST00000549947 RSPH6AQ9H0K4 717 aa14.06□□□□□ -0.16
CNOT2-221ENST00000549947 PRDM9Q9NQV7 894 aa14.06□□□□□ -0.16
CNOT2-221ENST00000549947 S1PR4O95977 384 aa14.05□□□□□ -0.16
CNOT2-221ENST00000549947 GJA5P36382 358 aa14.05□□□□□ -0.16
CNOT2-221ENST00000549947 CSPP1Q1MSJ5 1256 aa14.05□□□□□ -0.16
CNOT2-221ENST00000549947 PPP1R18Q6NYC8 613 aa14.05□□□□□ -0.16
CNOT2-221ENST00000549947 C6orf229H3BNL8 230 aa14.03□□□□□ -0.16
CNOT2-221ENST00000549947 CABLES1Q8TDN4 633 aa14.03□□□□□ -0.16
CNOT2-221ENST00000549947 SLC6A16Q9GZN6 736 aa14.03□□□□□ -0.16
CNOT2-221ENST00000549947 SKIV2LQ15477 1246 aaKnown RBP14.02□□□□□ -0.17
CNOT2-221ENST00000549947 QPCTQ16769 361 aa14.02□□□□□ -0.17
CNOT2-221ENST00000549947 PROCA1Q8NCQ7 364 aaPredicted RBP14.02□□□□□ -0.17
CNOT2-221ENST00000549947 USB1Q9BQ65 265 aaKnown RBP14.02□□□□□ -0.17
CNOT2-221ENST00000549947 FBXO31Q5XUX0 539 aaPredicted RBP14.01□□□□□ -0.17
CNOT2-221ENST00000549947 PPEF1O14829 653 aaPredicted RBP14□□□□□ -0.17
CNOT2-221ENST00000549947 HRCP23327 699 aa14□□□□□ -0.17
CNOT2-221ENST00000549947 MSS51Q4VC12 460 aa14□□□□□ -0.17
CNOT2-221ENST00000549947 MTMR2Q13614 643 aa13.99□□□□□ -0.17
CNOT2-221ENST00000549947 TUSC1Q2TAM9 212 aa13.99□□□□□ -0.17
CNOT2-221ENST00000549947 RETREG3Q86VR2 466 aa13.99□□□□□ -0.17
CNOT2-221ENST00000549947 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.99□□□□□ -0.17
CNOT2-221ENST00000549947 RNF223E7ERA6 249 aa13.98□□□□□ -0.17
CNOT2-221ENST00000549947 LILRB3O75022 631 aa13.97□□□□□ -0.17
CNOT2-221ENST00000549947 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.97□□□□□ -0.17
CNOT2-221ENST00000549947 ZBTB3Q9H5J0 574 aa13.97□□□□□ -0.17
CNOT2-221ENST00000549947 PRPF38BQ5VTL8 546 aaKnown RBP13.96□□□□□ -0.17
CNOT2-221ENST00000549947 CFAP99D6REC4 459 aa13.94□□□□□ -0.18
CNOT2-221ENST00000549947 MMP16P51512 607 aa13.94□□□□□ -0.18
CNOT2-221ENST00000549947 RTL5Q5HYW3 569 aaPredicted RBP13.94□□□□□ -0.18
CNOT2-221ENST00000549947 PRR7Q8TB68 274 aa13.94□□□□□ -0.18
CNOT2-221ENST00000549947 GOPCQ9HD26 462 aa13.94□□□□□ -0.18
CNOT2-221ENST00000549947 DXOO77932 396 aaKnown RBP13.93□□□□□ -0.18
CNOT2-221ENST00000549947 GGCXP38435 758 aa13.93□□□□□ -0.18
CNOT2-221ENST00000549947 PLA2G2CQ5R387 149 aa13.92□□□□□ -0.18
CNOT2-221ENST00000549947 SPDYE5A6NIY4 337 aa13.91□□□□□ -0.18
CNOT2-221ENST00000549947 JUNDP17535 347 aa13.91□□□□□ -0.18
CNOT2-221ENST00000549947 EMID1Q96A84 441 aaPredicted RBP13.91□□□□□ -0.18
CNOT2-221ENST00000549947 NUTM2BA6NNL0 878 aaPredicted RBP13.9□□□□□ -0.18
CNOT2-221ENST00000549947 NUTM2EB1AL46 878 aaPredicted RBP13.9□□□□□ -0.18
CNOT2-221ENST00000549947 NUTM2DQ5VT03 806 aaPredicted RBP13.9□□□□□ -0.18
CNOT2-221ENST00000549947 NUTM2AQ8IVF1 878 aaPredicted RBP13.9□□□□□ -0.18
CNOT2-221ENST00000549947 ANKLE1Q8NAG6 615 aa13.9□□□□□ -0.18
CNOT2-221ENST00000549947 FCF1Q9Y324 198 aaKnown RBP13.9□□□□□ -0.18
CNOT2-221ENST00000549947 ATP1B4Q9UN42 357 aaPredicted RBP13.89□□□□□ -0.19
CNOT2-221ENST00000549947 PCMTD1Q96MG8 357 aaPredicted RBP13.88□□□□□ -0.19
CNOT2-221ENST00000549947 PPP2R2DQ66LE6 453 aa13.86□□□□□ -0.19
CNOT2-221ENST00000549947 DESI1Q6ICB0 168 aa13.84□□□□□ -0.19
CNOT2-221ENST00000549947 TSC1Q92574 1164 aa13.83□□□□□ -0.2
CNOT2-221ENST00000549947 PER1O15534 1290 aaPredicted RBP13.82□□□□□ -0.2
CNOT2-221ENST00000549947 LIAT1Q6ZQX7 453 aa13.82□□□□□ -0.2
CNOT2-221ENST00000549947 NUDT12Q9BQG2 462 aa13.81□□□□□ -0.2
CNOT2-221ENST00000549947 PRKD2Q9BZL6 878 aa13.81□□□□□ -0.2
CNOT2-221ENST00000549947 RFC5P40937 340 aa13.8□□□□□ -0.2
CNOT2-221ENST00000549947 CCDC24Q8N4L8 307 aa13.8□□□□□ -0.2
CNOT2-221ENST00000549947 PTPRNQ16849 979 aa13.79□□□□□ -0.2
CNOT2-221ENST00000549947 LYPD8Q6UX82 237 aa13.79□□□□□ -0.2
CNOT2-221ENST00000549947 CTDSPL2Q05D32 466 aa13.78□□□□□ -0.2
CNOT2-221ENST00000549947 RGS20O76081 388 aa13.77□□□□□ -0.21
CNOT2-221ENST00000549947 PTCRAQ6ISU1 281 aaPredicted RBP13.77□□□□□ -0.21
CNOT2-221ENST00000549947 CCNYL3P0C7X3 344 aa13.76□□□□□ -0.21
CNOT2-221ENST00000549947 SLC19A1P41440 591 aa13.76□□□□□ -0.21
CNOT2-221ENST00000549947 HELBQ8NG08 1087 aaPredicted RBP13.76□□□□□ -0.21
CNOT2-221ENST00000549947 AP1G2O75843 785 aa13.74□□□□□ -0.21
CNOT2-221ENST00000549947 MAP10Q9P2G4 905 aa13.74□□□□□ -0.21
CNOT2-221ENST00000549947 V9GY48 417 aaPredicted RBP13.74□□□□□ -0.21
CNOT2-221ENST00000549947 F12P00748 615 aaPredicted RBP13.73□□□□□ -0.21
CNOT2-221ENST00000549947 EVA1BQ9NVM1 165 aa13.73□□□□□ -0.21
CNOT2-221ENST00000549947 TMEM132AQ24JP5 1023 aa13.72□□□□□ -0.21
CNOT2-221ENST00000549947 LRRN4Q8WUT4 740 aa13.72□□□□□ -0.21
CNOT2-221ENST00000549947 KCNH2Q12809 1159 aa13.71□□□□□ -0.21
CNOT2-221ENST00000549947 SPRYD7Q5W111 196 aa13.71□□□□□ -0.21
CNOT2-221ENST00000549947 USP17L8P0C7I0 530 aa13.69□□□□□ -0.22
CNOT2-221ENST00000549947 RPIAP49247 311 aa13.69□□□□□ -0.22
CNOT2-221ENST00000549947 CTHP32929 405 aa13.68□□□□□ -0.22
CNOT2-221ENST00000549947 TRIM32Q13049 653 aa13.68□□□□□ -0.22
CNOT2-221ENST00000549947 UNC93B1Q9H1C4 597 aa13.68□□□□□ -0.22
CNOT2-221ENST00000549947 HMX1Q9NP08 348 aaPredicted RBP13.68□□□□□ -0.22
CNOT2-221ENST00000549947 ZBTB24O43167 697 aaPredicted RBP13.67□□□□□ -0.22
CNOT2-221ENST00000549947 TMEM259Q4ZIN3 620 aa13.65□□□□□ -0.22
CNOT2-221ENST00000549947 ZNF598Q86UK7 904 aaKnown RBP13.65□□□□□ -0.22
CNOT2-221ENST00000549947 ZNF697Q5TEC3 545 aa13.64□□□□□ -0.23
CNOT2-221ENST00000549947 EPS8L1Q8TE68 723 aa13.63□□□□□ -0.23
CNOT2-221ENST00000549947 SKOR1P84550 965 aa13.62□□□□□ -0.23
CNOT2-221ENST00000549947 NR6A1Q15406 480 aa13.62□□□□□ -0.23
CNOT2-221ENST00000549947 TRIM67Q6ZTA4 783 aa13.62□□□□□ -0.23
CNOT2-221ENST00000549947 CD2BP2O95400 341 aaKnown RBP13.61□□□□□ -0.23
CNOT2-221ENST00000549947 LINC01559Q495D7 138 aa13.61□□□□□ -0.23
CNOT2-221ENST00000549947 BAP1Q92560 729 aa13.6□□□□□ -0.23
CNOT2-221ENST00000549947 SNRKQ9NRH2 765 aa13.59□□□□□ -0.23
CNOT2-221ENST00000549947 TRIM34Q9BYJ4 488 aa13.58□□□□□ -0.24
CNOT2-221ENST00000549947 PKD2L1Q9P0L9 805 aa13.58□□□□□ -0.24
CNOT2-221ENST00000549947 SH3BP2P78314 561 aa13.57□□□□□ -0.24
CNOT2-221ENST00000549947 BANK1Q8NDB2 785 aa13.57□□□□□ -0.24
CNOT2-221ENST00000549947 GDF9O60383 454 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms