RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 KDM5AP29375 1690 aaKnown RBP9.6□□□□□ -0.87
NPAS3-207ENST00000549770 STRCP1A6NGW2 1772 aa9.6□□□□□ -0.87
NPAS3-207ENST00000549770 HFM1A2PYH4 1435 aa9.59□□□□□ -0.87
NPAS3-207ENST00000549770 CHRM1P11229 460 aaPredicted RBP9.59□□□□□ -0.87
NPAS3-207ENST00000549770 ATN1P54259 1190 aaPredicted RBP9.59□□□□□ -0.87
NPAS3-207ENST00000549770 TMEM131LA2VDJ0 1609 aa9.59□□□□□ -0.87
NPAS3-207ENST00000549770 SPHKAPQ2M3C7 1700 aa9.59□□□□□ -0.87
NPAS3-207ENST00000549770 TTLL13PA6NNM8 815 aa9.57□□□□□ -0.88
NPAS3-207ENST00000549770 NUTM2DQ5VT03 806 aaPredicted RBP9.57□□□□□ -0.88
NPAS3-207ENST00000549770 BCANQ96GW7 911 aa9.57□□□□□ -0.88
NPAS3-207ENST00000549770 RTN4Q9NQC3 1192 aaKnown RBP9.57□□□□□ -0.88
NPAS3-207ENST00000549770 RIMS2Q9UQ26 1411 aa9.56□□□□□ -0.88
NPAS3-207ENST00000549770 UBAP1LF5GYI3 381 aa9.56□□□□□ -0.88
NPAS3-207ENST00000549770 ZNF467Q7Z7K2 595 aaPredicted RBP9.56□□□□□ -0.88
NPAS3-207ENST00000549770 SLC26A8Q96RN1 970 aa9.56□□□□□ -0.88
NPAS3-207ENST00000549770 CPS1P31327 1500 aa9.56□□□□□ -0.88
NPAS3-207ENST00000549770 ZFYVE9O95405 1425 aa9.56□□□□□ -0.88
NPAS3-207ENST00000549770 IQSEC2Q5JU85 1478 aa9.55□□□□□ -0.88
NPAS3-207ENST00000549770 POTEMA6NI47 508 aa9.55□□□□□ -0.88
NPAS3-207ENST00000549770 PPP1R15AO75807 674 aaPredicted RBP9.55□□□□□ -0.88
NPAS3-207ENST00000549770 TMEM106CQ9BVX2 250 aa9.55□□□□□ -0.88
NPAS3-207ENST00000549770 CLTCL1P53675 1640 aa9.55□□□□□ -0.88
NPAS3-207ENST00000549770 SLC24A1O60721 1099 aa9.54□□□□□ -0.88
NPAS3-207ENST00000549770 LRRC7Q96NW7 1537 aa9.53□□□□□ -0.88
NPAS3-207ENST00000549770 ZNF326Q5BKZ1 582 aaKnown RBP9.53□□□□□ -0.88
NPAS3-207ENST00000549770 SLC39A7Q92504 469 aa9.53□□□□□ -0.88
NPAS3-207ENST00000549770 METRNQ9UJH8 293 aa9.53□□□□□ -0.88
NPAS3-207ENST00000549770 TRPM2O94759 1503 aa9.52□□□□□ -0.88
NPAS3-207ENST00000549770 PIP4K2BP78356 416 aa9.52□□□□□ -0.89
NPAS3-207ENST00000549770 RBM33Q96EV2 1170 aaKnown RBP9.52□□□□□ -0.89
NPAS3-207ENST00000549770 TRIM35Q9UPQ4 493 aa9.52□□□□□ -0.89
NPAS3-207ENST00000549770 XIRP1Q702N8 1843 aaKnown RBP9.52□□□□□ -0.89
NPAS3-207ENST00000549770 PLEKHG1Q9ULL1 1385 aa9.51□□□□□ -0.89
NPAS3-207ENST00000549770 C7P10643 843 aa9.51□□□□□ -0.89
NPAS3-207ENST00000549770 POTEGQ6S5H5 508 aa9.51□□□□□ -0.89
NPAS3-207ENST00000549770 KIF1BO60333 1816 aa9.51□□□□□ -0.89
NPAS3-207ENST00000549770 SETD5Q9C0A6 1442 aa9.5□□□□□ -0.89
NPAS3-207ENST00000549770 HDGFP51858 240 aaKnown RBP9.5□□□□□ -0.89
NPAS3-207ENST00000549770 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.5□□□□□ -0.89
NPAS3-207ENST00000549770 RAB3GAP2Q9H2M9 1393 aa9.49□□□□□ -0.89
NPAS3-207ENST00000549770 ALKQ9UM73 1620 aa9.49□□□□□ -0.89
NPAS3-207ENST00000549770 CHD2O14647 1828 aaKnown RBP9.48□□□□□ -0.89
NPAS3-207ENST00000549770 TOM1O60784 492 aa9.48□□□□□ -0.89
NPAS3-207ENST00000549770 KCNA6P17658 529 aa9.48□□□□□ -0.89
NPAS3-207ENST00000549770 PSEN1P49768 467 aa9.48□□□□□ -0.89
NPAS3-207ENST00000549770 PROSER2Q86WR7 435 aaPredicted RBP9.48□□□□□ -0.89
NPAS3-207ENST00000549770 MPHOSPH9Q99550 1183 aa9.48□□□□□ -0.89
NPAS3-207ENST00000549770 NWD1Q149M9 1564 aa9.48□□□□□ -0.89
NPAS3-207ENST00000549770 TMEM94Q12767 1356 aa9.48□□□□□ -0.89
NPAS3-207ENST00000549770 ADAMTS13Q76LX8 1427 aa9.48□□□□□ -0.89
NPAS3-207ENST00000549770 NEXMIFQ5QGS0 1516 aa9.47□□□□□ -0.89
NPAS3-207ENST00000549770 NRXN3Q9Y4C0 1643 aa9.47□□□□□ -0.89
NPAS3-207ENST00000549770 PDAP1Q13442 181 aaKnown RBP9.46□□□□□ -0.9
NPAS3-207ENST00000549770 ERICH6Q7L0X2 663 aa9.46□□□□□ -0.9
NPAS3-207ENST00000549770 TBX22Q9Y458 520 aa9.46□□□□□ -0.9
NPAS3-207ENST00000549770 NKTRP30414 1462 aaKnown RBP9.46□□□□□ -0.9
NPAS3-207ENST00000549770 DIP2AQ14689 1571 aa9.46□□□□□ -0.9
NPAS3-207ENST00000549770 SEC24BO95487 1268 aa9.45□□□□□ -0.9
NPAS3-207ENST00000549770 HSPA1LP34931 641 aa9.45□□□□□ -0.9
NPAS3-207ENST00000549770 RGL3Q3MIN7 710 aa9.45□□□□□ -0.9
NPAS3-207ENST00000549770 SETBP1Q9Y6X0 1596 aa9.45□□□□□ -0.9
NPAS3-207ENST00000549770 ECM2O94769 699 aaPredicted RBP9.44□□□□□ -0.9
NPAS3-207ENST00000549770 HRCP23327 699 aa9.44□□□□□ -0.9
NPAS3-207ENST00000549770 CCDC144AA2RUR9 1427 aa9.44□□□□□ -0.9
NPAS3-207ENST00000549770 PTPRUQ92729 1446 aa9.44□□□□□ -0.9
NPAS3-207ENST00000549770 PPLO60437 1756 aa9.44□□□□□ -0.9
NPAS3-207ENST00000549770 PRKCSHP14314 528 aaPredicted RBP9.43□□□□□ -0.9
NPAS3-207ENST00000549770 GOLGA2Q08379 1002 aa9.43□□□□□ -0.9
NPAS3-207ENST00000549770 IER5LQ5T953 404 aa9.43□□□□□ -0.9
NPAS3-207ENST00000549770 C14orf37Q86TY3 774 aa9.43□□□□□ -0.9
NPAS3-207ENST00000549770 AMOTL2Q9Y2J4 779 aa9.43□□□□□ -0.9
NPAS3-207ENST00000549770 METP08581 1390 aa9.42□□□□□ -0.9
NPAS3-207ENST00000549770 RIOK3O14730 519 aaKnown RBP9.42□□□□□ -0.9
NPAS3-207ENST00000549770 RNF25Q96BH1 459 aaPredicted RBP9.42□□□□□ -0.9
NPAS3-207ENST00000549770 MSH6P52701 1360 aa9.41□□□□□ -0.9
NPAS3-207ENST00000549770 VGFO15240 615 aaPredicted RBP9.41□□□□□ -0.9
NPAS3-207ENST00000549770 POTEJP0CG39 1038 aa9.41□□□□□ -0.9
NPAS3-207ENST00000549770 MAMSTRQ6ZN01 415 aa9.41□□□□□ -0.9
NPAS3-207ENST00000549770 FAM163AQ96GL9 167 aaPredicted RBP9.41□□□□□ -0.9
NPAS3-207ENST00000549770 COLQQ9Y215 455 aaPredicted RBP9.41□□□□□ -0.9
NPAS3-207ENST00000549770 SETD1AO15047 1707 aaKnown RBP9.41□□□□□ -0.9
NPAS3-207ENST00000549770 XRN1Q8IZH2 1706 aaKnown RBP9.41□□□□□ -0.9
NPAS3-207ENST00000549770 SPATA31E1Q6ZUB1 1445 aa9.4□□□□□ -0.9
NPAS3-207ENST00000549770 PIK3R4Q99570 1358 aa9.4□□□□□ -0.9
NPAS3-207ENST00000549770 IFT172Q9UG01 1749 aa9.4□□□□□ -0.9
NPAS3-207ENST00000549770 ROBO1Q9Y6N7 1651 aa9.4□□□□□ -0.9
NPAS3-207ENST00000549770 POTEFA5A3E0 1075 aa9.4□□□□□ -0.9
NPAS3-207ENST00000549770 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.39□□□□□ -0.91
NPAS3-207ENST00000549770 DISP3Q9P2K9 1392 aa9.39□□□□□ -0.91
NPAS3-207ENST00000549770 RPGRIP1LQ68CZ1 1315 aa9.39□□□□□ -0.91
NPAS3-207ENST00000549770 ADGRF5Q8IZF2 1346 aa9.39□□□□□ -0.91
NPAS3-207ENST00000549770 MKRN3Q13064 507 aaKnown RBP9.38□□□□□ -0.91
NPAS3-207ENST00000549770 CABP2Q9NPB3 220 aa9.38□□□□□ -0.91
NPAS3-207ENST00000549770 ACIN1Q9UKV3 1341 aaKnown RBP9.37□□□□□ -0.91
NPAS3-207ENST00000549770 NALCNQ8IZF0 1738 aa9.37□□□□□ -0.91
NPAS3-207ENST00000549770 PLCG2P16885 1265 aa9.37□□□□□ -0.91
NPAS3-207ENST00000549770 SLAIN2Q9P270 581 aa9.37□□□□□ -0.91
NPAS3-207ENST00000549770 PCDH10Q9P2E7 1040 aa9.37□□□□□ -0.91
NPAS3-207ENST00000549770 ANKRD30BQ9BXX2 1392 aa9.37□□□□□ -0.91
NPAS3-207ENST00000549770 ATF3P18847 181 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms