RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 CFAP99D6REC4 459 aa15.57■□□□□ 0.08
PRIM1-204ENST00000549549 LRRN4Q8WUT4 740 aa15.57■□□□□ 0.08
PRIM1-204ENST00000549549 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.56■□□□□ 0.08
PRIM1-204ENST00000549549 VAC14Q08AM6 782 aa15.56■□□□□ 0.08
PRIM1-204ENST00000549549 SP7Q8TDD2 431 aaPredicted RBP15.56■□□□□ 0.08
PRIM1-204ENST00000549549 BRD1O95696 1058 aa15.54■□□□□ 0.08
PRIM1-204ENST00000549549 RFX1P22670 979 aa15.54■□□□□ 0.08
PRIM1-204ENST00000549549 MAMSTRQ6ZN01 415 aa15.54■□□□□ 0.08
PRIM1-204ENST00000549549 KCNH8Q96L42 1107 aa15.54■□□□□ 0.08
PRIM1-204ENST00000549549 SCUBE2Q9NQ36 999 aa15.54■□□□□ 0.08
PRIM1-204ENST00000549549 GRIPAP1Q4V328 841 aa15.53■□□□□ 0.08
PRIM1-204ENST00000549549 SLC4A5Q9BY07 1137 aa15.53■□□□□ 0.08
PRIM1-204ENST00000549549 RABGEF1Q9UJ41 708 aa15.53■□□□□ 0.08
PRIM1-204ENST00000549549 SOX11P35716 441 aa15.52■□□□□ 0.08
PRIM1-204ENST00000549549 KCNA1Q09470 495 aa15.52■□□□□ 0.08
PRIM1-204ENST00000549549 PALM3A6NDB9 673 aaPredicted RBP15.51■□□□□ 0.07
PRIM1-204ENST00000549549 SNPHO15079 494 aa15.51■□□□□ 0.07
PRIM1-204ENST00000549549 EPS8L1Q8TE68 723 aa15.51■□□□□ 0.07
PRIM1-204ENST00000549549 CSB-PGBD3P0DP91 1061 aa15.5■□□□□ 0.07
PRIM1-204ENST00000549549 C6orf229H3BNL8 230 aa15.49■□□□□ 0.07
PRIM1-204ENST00000549549 MFAP1P55081 439 aaKnown RBP15.49■□□□□ 0.07
PRIM1-204ENST00000549549 FUT2Q10981 343 aa15.49■□□□□ 0.07
PRIM1-204ENST00000549549 POTEHQ6S545 545 aa15.49■□□□□ 0.07
PRIM1-204ENST00000549549 HDGFP51858 240 aaKnown RBP15.48■□□□□ 0.07
PRIM1-204ENST00000549549 TSC1Q92574 1164 aa15.48■□□□□ 0.07
PRIM1-204ENST00000549549 UCN2Q96RP3 112 aa15.48■□□□□ 0.07
PRIM1-204ENST00000549549 SLF2Q8IX21 1173 aa15.47■□□□□ 0.07
PRIM1-204ENST00000549549 ATP6V1AP38606 617 aa15.46■□□□□ 0.07
PRIM1-204ENST00000549549 SLC4A3P48751 1232 aa15.46■□□□□ 0.07
PRIM1-204ENST00000549549 PRR7Q8TB68 274 aa15.46■□□□□ 0.07
PRIM1-204ENST00000549549 TFIP11Q9UBB9 837 aaKnown RBP15.46■□□□□ 0.07
PRIM1-204ENST00000549549 FAM98CQ17RN3 349 aaKnown RBP15.45■□□□□ 0.06
PRIM1-204ENST00000549549 MTMR7Q9Y216 660 aa15.45■□□□□ 0.06
PRIM1-204ENST00000549549 LMOD1P29536 600 aaPredicted RBP15.44■□□□□ 0.06
PRIM1-204ENST00000549549 PSEN2P49810 448 aa15.44■□□□□ 0.06
PRIM1-204ENST00000549549 SEPT9Q9UHD8 586 aaPredicted RBP15.44■□□□□ 0.06
PRIM1-204ENST00000549549 ATG7O95352 703 aa15.43■□□□□ 0.06
PRIM1-204ENST00000549549 CFHP08603 1231 aa15.42■□□□□ 0.06
PRIM1-204ENST00000549549 NR6A1Q15406 480 aa15.42■□□□□ 0.06
PRIM1-204ENST00000549549 SYMPKQ92797 1274 aaKnown RBP15.41■□□□□ 0.06
PRIM1-204ENST00000549549 ARHGAP33O14559 1287 aa15.4■□□□□ 0.06
PRIM1-204ENST00000549549 DESI1Q6ICB0 168 aa15.4■□□□□ 0.06
PRIM1-204ENST00000549549 PER1O15534 1290 aaPredicted RBP15.39■□□□□ 0.05
PRIM1-204ENST00000549549 SEMA3FQ13275 785 aa15.39■□□□□ 0.05
PRIM1-204ENST00000549549 MAFBQ9Y5Q3 323 aaPredicted RBP15.39■□□□□ 0.05
PRIM1-204ENST00000549549 RETREG3Q86VR2 466 aa15.38■□□□□ 0.05
PRIM1-204ENST00000549549 PNMA1Q8ND90 353 aa15.38■□□□□ 0.05
PRIM1-204ENST00000549549 POTEEQ6S8J3 1075 aa15.37■□□□□ 0.05
PRIM1-204ENST00000549549 SAMD7Q7Z3H4 446 aa15.37■□□□□ 0.05
PRIM1-204ENST00000549549 LAPTM4BQ86VI4 370 aa15.37■□□□□ 0.05
PRIM1-204ENST00000549549 TMEM88BA6NKF7 163 aa15.36■□□□□ 0.05
PRIM1-204ENST00000549549 VRTNQ9H8Y1 702 aa15.35■□□□□ 0.05
PRIM1-204ENST00000549549 CARNS1A5YM72 827 aa15.34■□□□□ 0.05
PRIM1-204ENST00000549549 EIF4G2P78344 907 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRIM1-204ENST00000549549 MORN1Q5T089 497 aa15.34■□□□□ 0.05
PRIM1-204ENST00000549549 TBC1D9Q6ZT07 1266 aa15.34■□□□□ 0.05
PRIM1-204ENST00000549549 DMRTA1Q5VZB9 504 aa15.33■□□□□ 0.04
PRIM1-204ENST00000549549 ATP9BO43861 1147 aa15.32■□□□□ 0.04
PRIM1-204ENST00000549549 KMT5BQ4FZB7 885 aa15.32■□□□□ 0.04
PRIM1-204ENST00000549549 LYPD8Q6UX82 237 aa15.32■□□□□ 0.04
PRIM1-204ENST00000549549 VPS9D1Q9Y2B5 631 aa15.32■□□□□ 0.04
PRIM1-204ENST00000549549 NR1H3Q13133 447 aa15.31■□□□□ 0.04
PRIM1-204ENST00000549549 Q3C1V9 767 aa15.31■□□□□ 0.04
PRIM1-204ENST00000549549 CDCA8Q53HL2 280 aa15.29■□□□□ 0.04
PRIM1-204ENST00000549549 SLC27A5Q9Y2P5 690 aa15.29■□□□□ 0.04
PRIM1-204ENST00000549549 ACTN4O43707 911 aaKnown RBP15.28■□□□□ 0.04
PRIM1-204ENST00000549549 KANK4Q5T7N3 995 aaPredicted RBP15.28■□□□□ 0.04
PRIM1-204ENST00000549549 FOXD4L5Q5VV16 416 aaPredicted RBP15.28■□□□□ 0.04
PRIM1-204ENST00000549549 FOXD4L4Q8WXT5 416 aaPredicted RBP15.28■□□□□ 0.04
PRIM1-204ENST00000549549 PBX2P40425 430 aa15.27■□□□□ 0.04
PRIM1-204ENST00000549549 ELOAQ14241 798 aaKnown RBP15.27■□□□□ 0.04
PRIM1-204ENST00000549549 BHMG1C9JSJ3 638 aaPredicted RBP15.26■□□□□ 0.03
PRIM1-204ENST00000549549 NFATC2IPQ8NCF5 419 aa15.26■□□□□ 0.03
PRIM1-204ENST00000549549 IVNS1ABPQ9Y6Y0 642 aa15.26■□□□□ 0.03
PRIM1-204ENST00000549549 NBPF3Q9H094 633 aa15.24■□□□□ 0.03
PRIM1-204ENST00000549549 AXIN2Q9Y2T1 843 aa15.24■□□□□ 0.03
PRIM1-204ENST00000549549 ZBBXA8MT70 800 aa15.23■□□□□ 0.03
PRIM1-204ENST00000549549 FBXO45P0C2W1 286 aa15.23■□□□□ 0.03
PRIM1-204ENST00000549549 PUS10Q3MIT2 529 aaKnown RBP15.23■□□□□ 0.03
PRIM1-204ENST00000549549 ZFRQ96KR1 1074 aaKnown RBP15.23■□□□□ 0.03
PRIM1-204ENST00000549549 GNEQ9Y223 722 aaKnown RBP15.23■□□□□ 0.03
PRIM1-204ENST00000549549 SALL2Q9Y467 1007 aaPredicted RBP15.23■□□□□ 0.03
PRIM1-204ENST00000549549 VARS2Q5ST30 1063 aaKnown RBP15.22■□□□□ 0.03
PRIM1-204ENST00000549549 SND1Q7KZF4 910 aaKnown RBP eCLIP15.22■□□□□ 0.032e-6■□□□□ 10
PRIM1-204ENST00000549549 ERBB3P21860 1342 aa15.21■□□□□ 0.03
PRIM1-204ENST00000549549 RNF40O75150 1001 aa15.21■□□□□ 0.03
PRIM1-204ENST00000549549 FKBPLQ9UIM3 349 aa15.21■□□□□ 0.03
PRIM1-204ENST00000549549 ZC3H4Q9UPT8 1303 aaKnown RBP15.19■□□□□ 0.02
PRIM1-204ENST00000549549 F12P00748 615 aaPredicted RBP15.19■□□□□ 0.02
PRIM1-204ENST00000549549 USB1Q9BQ65 265 aaKnown RBP15.19■□□□□ 0.02
PRIM1-204ENST00000549549 CCDC27Q2M243 656 aa15.18■□□□□ 0.02
PRIM1-204ENST00000549549 BRICD5Q6PL45 260 aa15.18■□□□□ 0.02
PRIM1-204ENST00000549549 PRR14Q9BWN1 585 aa15.18■□□□□ 0.02
PRIM1-204ENST00000549549 PIK3CDO00329 1044 aa15.17■□□□□ 0.02
PRIM1-204ENST00000549549 B4GALNT3Q6L9W6 998 aa15.17■□□□□ 0.02
PRIM1-204ENST00000549549 RNF19BQ6ZMZ0 732 aa15.17■□□□□ 0.02
PRIM1-204ENST00000549549 PLEKHM2Q8IWE5 1019 aa15.17■□□□□ 0.02
PRIM1-204ENST00000549549 ZNF428Q96B54 188 aa15.17■□□□□ 0.02
PRIM1-204ENST00000549549 AMOTL2Q9Y2J4 779 aa15.17■□□□□ 0.02
PRIM1-204ENST00000549549 RBM25P49756 843 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms