RNA–Protein interactions for RNA: ENST00000549493.6

ANKS1B-215, Transcript of ankyrin repeat and sterile alpha motif domain containing 1B, human

TSL 1 (best) BASIC

Gene ANKS1B, Length 3,328 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANKS1B-215	ENST00000549493	CEP152	O94986	1710 aa		10.51	□□□□□ -0.73
ANKS1B-215	ENST00000549493	NPC1L1	Q9UHC9	1359 aa		10.51	□□□□□ -0.73
ANKS1B-215	ENST00000549493	UHRF1BP1L	A0JNW5	1464 aa		10.51	□□□□□ -0.73
ANKS1B-215	ENST00000549493	ABCA6	Q8N139	1617 aa		10.5	□□□□□ -0.73
ANKS1B-215	ENST00000549493	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.5	□□□□□ -0.73
ANKS1B-215	ENST00000549493	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.5	□□□□□ -0.73
ANKS1B-215	ENST00000549493	FRAT2	O75474	233 aa	Predicted RBP	10.5	□□□□□ -0.73
ANKS1B-215	ENST00000549493	RAPGEF3	O95398	923 aa		10.5	□□□□□ -0.73
ANKS1B-215	ENST00000549493	PCDHB15	Q9Y5E8	787 aa		10.5	□□□□□ -0.73
ANKS1B-215	ENST00000549493	TET3	O43151	1660 aa		10.5	□□□□□ -0.73
ANKS1B-215	ENST00000549493	KDM5A	P29375	1690 aa	Known RBP	10.5	□□□□□ -0.73
ANKS1B-215	ENST00000549493	RARS	P54136	660 aa	Known RBP	10.49	□□□□□ -0.73
ANKS1B-215	ENST00000549493	TSR2	Q969E8	191 aa	Known RBP	10.49	□□□□□ -0.73
ANKS1B-215	ENST00000549493	RUNDC1	Q96C34	613 aa		10.49	□□□□□ -0.73
ANKS1B-215	ENST00000549493	ASXL2	Q76L83	1435 aa		10.49	□□□□□ -0.73
ANKS1B-215	ENST00000549493	C14orf93	Q9H972	538 aa	Known RBP	10.49	□□□□□ -0.73
ANKS1B-215	ENST00000549493	CLASP1	Q7Z460	1538 aa		10.49	□□□□□ -0.73
ANKS1B-215	ENST00000549493	MAP3K4	Q9Y6R4	1608 aa		10.48	□□□□□ -0.73
ANKS1B-215	ENST00000549493	U2SURP	O15042	1029 aa	Known RBP	10.48	□□□□□ -0.73
ANKS1B-215	ENST00000549493	USP35	Q9P2H5	1018 aa		10.48	□□□□□ -0.73
ANKS1B-215	ENST00000549493	BRPF3	Q9ULD4	1205 aa		10.48	□□□□□ -0.73
ANKS1B-215	ENST00000549493	GGNBP2	Q9H3C7	697 aa		10.48	□□□□□ -0.73
ANKS1B-215	ENST00000549493	CGNL1	Q0VF96	1302 aa		10.47	□□□□□ -0.73
ANKS1B-215	ENST00000549493	DEPDC5	O75140	1603 aa		10.47	□□□□□ -0.73
ANKS1B-215	ENST00000549493	MROH1	Q8NDA8	1641 aa		10.47	□□□□□ -0.73
ANKS1B-215	ENST00000549493	PDE3A	Q14432	1141 aa		10.47	□□□□□ -0.73
ANKS1B-215	ENST00000549493	SLK	Q9H2G2	1235 aa	Predicted RBP	10.47	□□□□□ -0.73
ANKS1B-215	ENST00000549493	POLR3A	O14802	1390 aa	Predicted RBP	10.47	□□□□□ -0.73
ANKS1B-215	ENST00000549493	NPAT	Q14207	1427 aa		10.47	□□□□□ -0.73
ANKS1B-215	ENST00000549493	FBLN1	P23142	703 aa		10.46	□□□□□ -0.73
ANKS1B-215	ENST00000549493	USP19	O94966	1318 aa		10.46	□□□□□ -0.73
ANKS1B-215	ENST00000549493	MROH2A	A6NES4	1674 aa		10.46	□□□□□ -0.73
ANKS1B-215	ENST00000549493	VWDE	Q8N2E2	1590 aa		10.46	□□□□□ -0.73
ANKS1B-215	ENST00000549493	INO80	Q9ULG1	1556 aa	Predicted RBP	10.46	□□□□□ -0.73
ANKS1B-215	ENST00000549493	NPM1	P06748	294 aa	Known RBP eCLIP	10.46	□□□□□ -0.74
ANKS1B-215	ENST00000549493	SRPK2	P78362	688 aa	Known RBP	10.46	□□□□□ -0.74
ANKS1B-215	ENST00000549493	SPRYD3	Q8NCJ5	442 aa		10.46	□□□□□ -0.74
ANKS1B-215	ENST00000549493	GSE1	Q14687	1217 aa		10.45	□□□□□ -0.74
ANKS1B-215	ENST00000549493	MYOM2	P54296	1465 aa		10.45	□□□□□ -0.74
ANKS1B-215	ENST00000549493	PPRC1	Q5VV67	1664 aa	Known RBP	10.45	□□□□□ -0.74
ANKS1B-215	ENST00000549493	EFCAB6	Q5THR3	1501 aa		10.44	□□□□□ -0.74
ANKS1B-215	ENST00000549493	CFAP53	Q96M91	514 aa		10.44	□□□□□ -0.74
ANKS1B-215	ENST00000549493	PDZRN3	Q9UPQ7	1066 aa		10.44	□□□□□ -0.74
ANKS1B-215	ENST00000549493	MINK1	Q8N4C8	1332 aa	Predicted RBP	10.44	□□□□□ -0.74
ANKS1B-215	ENST00000549493	ABCA9	Q8IUA7	1624 aa		10.43	□□□□□ -0.74
ANKS1B-215	ENST00000549493	IDI1	Q13907	227 aa		10.43	□□□□□ -0.74
ANKS1B-215	ENST00000549493	ZNF518A	Q6AHZ1	1483 aa		10.42	□□□□□ -0.74
ANKS1B-215	ENST00000549493	KIF1B	O60333	1816 aa		10.42	□□□□□ -0.74
ANKS1B-215	ENST00000549493	KIDINS220	Q9ULH0	1771 aa		10.42	□□□□□ -0.74
ANKS1B-215	ENST00000549493	EXOSC9	Q06265	439 aa	Known RBP	10.42	□□□□□ -0.74
ANKS1B-215	ENST00000549493	EVC2	Q86UK5	1308 aa		10.42	□□□□□ -0.74
ANKS1B-215	ENST00000549493	ARAP3	Q8WWN8	1544 aa		10.42	□□□□□ -0.74
ANKS1B-215	ENST00000549493	FTSJ3	Q8IY81	847 aa	Known RBP	10.41	□□□□□ -0.74
ANKS1B-215	ENST00000549493	SBNO2	Q9Y2G9	1366 aa		10.41	□□□□□ -0.74
ANKS1B-215	ENST00000549493	WDR63	Q8IWG1	891 aa		10.41	□□□□□ -0.74
ANKS1B-215	ENST00000549493	SMC4	Q9NTJ3	1288 aa		10.41	□□□□□ -0.74
ANKS1B-215	ENST00000549493	CD109	Q6YHK3	1445 aa		10.41	□□□□□ -0.74
ANKS1B-215	ENST00000549493	HOMEZ	Q8IX15	550 aa		10.41	□□□□□ -0.74
ANKS1B-215	ENST00000549493	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.41	□□□□□ -0.74
ANKS1B-215	ENST00000549493	NRXN1	Q9ULB1	1477 aa		10.4	□□□□□ -0.74
ANKS1B-215	ENST00000549493	VGF	O15240	615 aa	Predicted RBP	10.4	□□□□□ -0.74
ANKS1B-215	ENST00000549493	NGEF	Q8N5V2	710 aa		10.4	□□□□□ -0.74
ANKS1B-215	ENST00000549493	KIAA1210	Q9ULL0	1709 aa		10.4	□□□□□ -0.74
ANKS1B-215	ENST00000549493	MAPK8IP3	Q9UPT6	1336 aa		10.4	□□□□□ -0.74
ANKS1B-215	ENST00000549493	ITPRIP	Q8IWB1	547 aa		10.4	□□□□□ -0.75
ANKS1B-215	ENST00000549493	PRAM1	Q96QH2	718 aa		10.4	□□□□□ -0.75
ANKS1B-215	ENST00000549493	MYH16	Q9H6N6	1097 aa		10.4	□□□□□ -0.75
ANKS1B-215	ENST00000549493	ADGRB3	O60242	1522 aa		10.39	□□□□□ -0.75
ANKS1B-215	ENST00000549493	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.39	□□□□□ -0.75
ANKS1B-215	ENST00000549493	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
ANKS1B-215	ENST00000549493	PMFBP1	Q8TBY8	1022 aa		10.39	□□□□□ -0.75
ANKS1B-215	ENST00000549493	SSH1	Q8WYL5	1049 aa		10.39	□□□□□ -0.75
ANKS1B-215	ENST00000549493	ADGRB1	O14514	1584 aa		10.39	□□□□□ -0.75
ANKS1B-215	ENST00000549493	TRIM27	P14373	513 aa		10.39	□□□□□ -0.75
ANKS1B-215	ENST00000549493	POGK	Q9P215	609 aa		10.39	□□□□□ -0.75
ANKS1B-215	ENST00000549493		A0A1W2PP64	1363 aa		10.39	□□□□□ -0.75
ANKS1B-215	ENST00000549493	SHPRH	Q149N8	1683 aa		10.39	□□□□□ -0.75
ANKS1B-215	ENST00000549493	TMPO	P42166	694 aa	Known RBP	10.38	□□□□□ -0.75
ANKS1B-215	ENST00000549493	MVP	Q14764	893 aa	Known RBP	10.38	□□□□□ -0.75
ANKS1B-215	ENST00000549493	ZKSCAN2	Q63HK3	967 aa		10.38	□□□□□ -0.75
ANKS1B-215	ENST00000549493	DZIP1L	Q8IYY4	767 aa	Known RBP	10.38	□□□□□ -0.75
ANKS1B-215	ENST00000549493	TRIM35	Q9UPQ4	493 aa		10.38	□□□□□ -0.75
ANKS1B-215	ENST00000549493	FYB1	O15117	783 aa		10.38	□□□□□ -0.75
ANKS1B-215	ENST00000549493	QRICH2	Q9H0J4	1663 aa		10.38	□□□□□ -0.75
ANKS1B-215	ENST00000549493	RWDD1	Q9H446	243 aa	Predicted RBP	10.38	□□□□□ -0.75
ANKS1B-215	ENST00000549493	NOB1	Q9ULX3	412 aa	Known RBP	10.38	□□□□□ -0.75
ANKS1B-215	ENST00000549493	MFAP1	P55081	439 aa	Known RBP	10.37	□□□□□ -0.75
ANKS1B-215	ENST00000549493	RIPK4	P57078	832 aa		10.37	□□□□□ -0.75
ANKS1B-215	ENST00000549493	THUMPD2	Q9BTF0	503 aa	Known RBP	10.37	□□□□□ -0.75
ANKS1B-215	ENST00000549493	ANKRD36B	Q8N2N9	1353 aa		10.37	□□□□□ -0.75
ANKS1B-215	ENST00000549493	IQSEC2	Q5JU85	1478 aa		10.37	□□□□□ -0.75
ANKS1B-215	ENST00000549493	ELL2	O00472	640 aa	Predicted RBP	10.36	□□□□□ -0.75
ANKS1B-215	ENST00000549493	PLEKHF1	Q96S99	279 aa		10.36	□□□□□ -0.75
ANKS1B-215	ENST00000549493	CABP1	Q9NZU7	370 aa		10.36	□□□□□ -0.75
ANKS1B-215	ENST00000549493	IFT172	Q9UG01	1749 aa		10.36	□□□□□ -0.75
ANKS1B-215	ENST00000549493	FRMPD1	Q5SYB0	1578 aa		10.36	□□□□□ -0.75
ANKS1B-215	ENST00000549493	TULP4	Q9NRJ4	1543 aa		10.36	□□□□□ -0.75
ANKS1B-215	ENST00000549493	POGZ	Q7Z3K3	1410 aa		10.36	□□□□□ -0.75
ANKS1B-215	ENST00000549493	CCDC27	Q2M243	656 aa		10.36	□□□□□ -0.75
ANKS1B-215	ENST00000549493	TBC1D2	Q9BYX2	928 aa		10.36	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms