RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 DCCP43146 1447 aa13.66□□□□□ -0.22
SMARCD1-206ENST00000549274 STRCP1A6NGW2 1772 aa13.66□□□□□ -0.22
SMARCD1-206ENST00000549274 ZNF335Q9H4Z2 1342 aaPredicted RBP13.65□□□□□ -0.22
SMARCD1-206ENST00000549274 ADGRL3Q9HAR2 1447 aa13.65□□□□□ -0.22
SMARCD1-206ENST00000549274 TMF1P82094 1093 aa13.65□□□□□ -0.22
SMARCD1-206ENST00000549274 EVC2Q86UK5 1308 aa13.64□□□□□ -0.23
SMARCD1-206ENST00000549274 CDC42BPGQ6DT37 1551 aa13.64□□□□□ -0.23
SMARCD1-206ENST00000549274 MSH6P52701 1360 aa13.64□□□□□ -0.23
SMARCD1-206ENST00000549274 ST20-MTHFSA0A0A6YYL1 179 aa13.64□□□□□ -0.23
SMARCD1-206ENST00000549274 HSPA5P11021 654 aaKnown RBP13.64□□□□□ -0.23
SMARCD1-206ENST00000549274 C14orf37Q86TY3 774 aa13.64□□□□□ -0.23
SMARCD1-206ENST00000549274 PUS7Q96PZ0 661 aaKnown RBP13.64□□□□□ -0.23
SMARCD1-206ENST00000549274 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
SMARCD1-206ENST00000549274 TMEM94Q12767 1356 aa13.63□□□□□ -0.23
SMARCD1-206ENST00000549274 C19orf44Q9H6X5 657 aa13.63□□□□□ -0.23
SMARCD1-206ENST00000549274 LTBP4Q8N2S1 1624 aa13.63□□□□□ -0.23
SMARCD1-206ENST00000549274 NALCNQ8IZF0 1738 aa13.62□□□□□ -0.23
SMARCD1-206ENST00000549274 WAPLQ7Z5K2 1190 aa13.61□□□□□ -0.23
SMARCD1-206ENST00000549274 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.61□□□□□ -0.23
SMARCD1-206ENST00000549274 ATAD2Q6PL18 1390 aa13.6□□□□□ -0.23
SMARCD1-206ENST00000549274 NINLQ9Y2I6 1382 aa13.6□□□□□ -0.23
SMARCD1-206ENST00000549274 ATF3P18847 181 aa13.6□□□□□ -0.23
SMARCD1-206ENST00000549274 ITSN1Q15811 1721 aa13.6□□□□□ -0.23
SMARCD1-206ENST00000549274 ANKARQ7Z5J8 1434 aa13.6□□□□□ -0.23
SMARCD1-206ENST00000549274 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
SMARCD1-206ENST00000549274 MINK1Q8N4C8 1332 aaPredicted RBP13.6□□□□□ -0.23
SMARCD1-206ENST00000549274 XIRP1Q702N8 1843 aaKnown RBP13.6□□□□□ -0.23
SMARCD1-206ENST00000549274 WASLO00401 505 aaPredicted RBP13.59□□□□□ -0.23
SMARCD1-206ENST00000549274 SAFB2Q14151 953 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMARCD1-206ENST00000549274 TESK2Q96S53 571 aa13.59□□□□□ -0.23
SMARCD1-206ENST00000549274 TULP4Q9NRJ4 1543 aa13.59□□□□□ -0.23
SMARCD1-206ENST00000549274 FMN2Q9NZ56 1722 aa13.59□□□□□ -0.23
SMARCD1-206ENST00000549274 PLEKHH1Q9ULM0 1364 aa13.58□□□□□ -0.23
SMARCD1-206ENST00000549274 SRPK2P78362 688 aaKnown RBP13.56□□□□□ -0.24
SMARCD1-206ENST00000549274 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
SMARCD1-206ENST00000549274 CDK19Q9BWU1 502 aa13.55□□□□□ -0.24
SMARCD1-206ENST00000549274 ZNF316A6NFI3 1004 aaPredicted RBP13.54□□□□□ -0.24
SMARCD1-206ENST00000549274 KIF1AQ12756 1690 aa13.53□□□□□ -0.24
SMARCD1-206ENST00000549274 TOM1O60784 492 aa13.53□□□□□ -0.24
SMARCD1-206ENST00000549274 AMER1Q5JTC6 1135 aaPredicted RBP13.53□□□□□ -0.24
SMARCD1-206ENST00000549274 HIRIP3Q9BW71 556 aaPredicted RBP13.53□□□□□ -0.24
SMARCD1-206ENST00000549274 CCDC61Q9Y6R9 512 aa13.53□□□□□ -0.24
SMARCD1-206ENST00000549274 ATP7BP35670 1465 aa13.52□□□□□ -0.25
SMARCD1-206ENST00000549274 TOPAZ1Q8N9V7 1692 aa13.52□□□□□ -0.25
SMARCD1-206ENST00000549274 CCDC7Q96M83 1385 aa13.51□□□□□ -0.25
SMARCD1-206ENST00000549274 DISP3Q9P2K9 1392 aa13.51□□□□□ -0.25
SMARCD1-206ENST00000549274 CERKQ8TCT0 537 aa13.51□□□□□ -0.25
SMARCD1-206ENST00000549274 NUDT16Q96DE0 195 aaKnown RBP13.51□□□□□ -0.25
SMARCD1-206ENST00000549274 MST1RQ04912 1400 aa13.5□□□□□ -0.25
SMARCD1-206ENST00000549274 BRD4O60885 1362 aaPredicted RBP13.5□□□□□ -0.25
SMARCD1-206ENST00000549274 MAPK8IP2Q13387 824 aaPredicted RBP13.5□□□□□ -0.25
SMARCD1-206ENST00000549274 RTN4Q9NQC3 1192 aaKnown RBP13.5□□□□□ -0.25
SMARCD1-206ENST00000549274 C1orf167Q5SNV9 1468 aa13.49□□□□□ -0.25
SMARCD1-206ENST00000549274 CABP2Q9NPB3 220 aa13.49□□□□□ -0.25
SMARCD1-206ENST00000549274 TERF2IPQ9NYB0 399 aa13.49□□□□□ -0.25
SMARCD1-206ENST00000549274 PPIP5K1Q6PFW1 1433 aa13.48□□□□□ -0.25
SMARCD1-206ENST00000549274 KIF7Q2M1P5 1343 aa13.48□□□□□ -0.25
SMARCD1-206ENST00000549274 HDGFL2Q7Z4V5 671 aaPredicted RBP13.48□□□□□ -0.25
SMARCD1-206ENST00000549274 RBM33Q96EV2 1170 aaKnown RBP13.48□□□□□ -0.25
SMARCD1-206ENST00000549274 ZNF692Q9BU19 519 aaPredicted RBP13.48□□□□□ -0.25
SMARCD1-206ENST00000549274 USP32Q8NFA0 1604 aa13.48□□□□□ -0.25
SMARCD1-206ENST00000549274 RGPD8O14715 1765 aaPredicted RBP13.48□□□□□ -0.25
SMARCD1-206ENST00000549274 PLEKHG3A1L390 1219 aa13.47□□□□□ -0.25
SMARCD1-206ENST00000549274 POLR3GLQ9BT43 218 aa13.47□□□□□ -0.25
SMARCD1-206ENST00000549274 SLAIN2Q9P270 581 aa13.47□□□□□ -0.25
SMARCD1-206ENST00000549274 MYOM1P52179 1685 aa13.47□□□□□ -0.25
SMARCD1-206ENST00000549274 WASHC2AQ641Q2 1341 aa13.46□□□□□ -0.25
SMARCD1-206ENST00000549274 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
SMARCD1-206ENST00000549274 ANKRD36BQ8N2N9 1353 aa13.45□□□□□ -0.26
SMARCD1-206ENST00000549274 ESCO1Q5FWF5 840 aa13.45□□□□□ -0.26
SMARCD1-206ENST00000549274 TMC1Q8TDI8 760 aa13.45□□□□□ -0.26
SMARCD1-206ENST00000549274 AKAP12Q02952 1782 aa13.45□□□□□ -0.26
SMARCD1-206ENST00000549274 NPHP3Q7Z494 1330 aa13.44□□□□□ -0.26
SMARCD1-206ENST00000549274 PRR36Q9H6K5 1346 aa13.44□□□□□ -0.26
SMARCD1-206ENST00000549274 NGDNQ8NEJ9 315 aaKnown RBP13.44□□□□□ -0.26
SMARCD1-206ENST00000549274 POLR3AO14802 1390 aaPredicted RBP13.44□□□□□ -0.26
SMARCD1-206ENST00000549274 UBAP1LF5GYI3 381 aa13.43□□□□□ -0.26
SMARCD1-206ENST00000549274 PSME1Q06323 249 aa13.43□□□□□ -0.26
SMARCD1-206ENST00000549274 MON2Q7Z3U7 1717 aa13.43□□□□□ -0.26
SMARCD1-206ENST00000549274 NUTM2FA1L443 756 aa13.42□□□□□ -0.26
SMARCD1-206ENST00000549274 CABP1Q9NZU7 370 aa13.42□□□□□ -0.26
SMARCD1-206ENST00000549274 ROBO1Q9Y6N7 1651 aa13.41□□□□□ -0.26
SMARCD1-206ENST00000549274 CPSF1Q10570 1443 aaKnown RBP13.41□□□□□ -0.26
SMARCD1-206ENST00000549274 EDC4Q6P2E9 1401 aaKnown RBP13.41□□□□□ -0.26
SMARCD1-206ENST00000549274 C11orf95C9JLR9 678 aaPredicted RBP13.41□□□□□ -0.26
SMARCD1-206ENST00000549274 NHSL1Q5SYE7 1610 aa13.41□□□□□ -0.26
SMARCD1-206ENST00000549274 KTN1Q86UP2 1357 aaKnown RBP13.41□□□□□ -0.26
SMARCD1-206ENST00000549274 ACEP12821 1306 aa13.4□□□□□ -0.26
SMARCD1-206ENST00000549274 AHDC1Q5TGY3 1603 aaPredicted RBP13.4□□□□□ -0.26
SMARCD1-206ENST00000549274 BRINP3Q76B58 766 aa13.4□□□□□ -0.26
SMARCD1-206ENST00000549274 SLC12A5Q9H2X9 1139 aa13.4□□□□□ -0.26
SMARCD1-206ENST00000549274 TTC21AQ8NDW8 1320 aa13.39□□□□□ -0.27
SMARCD1-206ENST00000549274 USP6P35125 1406 aa13.39□□□□□ -0.27
SMARCD1-206ENST00000549274 KNSTRNQ9Y448 316 aa13.39□□□□□ -0.27
SMARCD1-206ENST00000549274 NSD2O96028 1365 aa13.39□□□□□ -0.27
SMARCD1-206ENST00000549274 A0A1W2PP64 1363 aa13.38□□□□□ -0.27
SMARCD1-206ENST00000549274 SBNO1A3KN83 1393 aa13.38□□□□□ -0.27
SMARCD1-206ENST00000549274 PMFBP1Q8TBY8 1022 aa13.38□□□□□ -0.27
SMARCD1-206ENST00000549274 ORAI2Q96SN7 254 aa13.38□□□□□ -0.27
SMARCD1-206ENST00000549274 CGNL1Q0VF96 1302 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms